CN185706
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_HUMAN (Superoxide dismutase [Mn], mitochondrial OS=Homo sapiens GN=SOD2 PE=1 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 1.005e-52 Identity = 71/128 (55.47%), Postives = 86/128 (67.19%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 705 GH+NHSIFW NL+P GGGEP L AI FGS + +K++A +QGSGW WLG + E L + NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK IWNV+NW+ ++ Y Sbjct: 94 GHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 217 HSP 2 Score: 83.9593 bits (206), Expect = 1.005e-52 Identity = 40/69 (57.97%), Postives = 48/69 (69.57%), Query Frame = 2 Query: 113 QTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 Q +LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D + + LQ A+KFNG Sbjct: 24 QKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNG 92
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM1_CAEEL (Superoxide dismutase [Mn] 1, mitochondrial OS=Caenorhabditis elegans GN=sod-2 PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.005e-52 Identity = 76/131 (58.02%), Postives = 92/131 (70.23%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPT-LVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 711 GH+NHSIFW NLA + GGEP + L AI + FGSL+ L +++SA A+QGSGW WLG + K L V T ANQDPL +A T LVPL GIDVWEHAYYLQYKNV+PDY+ IW + NWK S+ + K Sbjct: 94 GHINHSIFWTNLA---KDGGEPS-AELLTAIKSDFGSLDNLQKQLSASTVAVQGSGWGWLGYCPKGKILKVATCANQDPL--EATTGLVPLFGIDVWEHAYYLQYKNVRPDYVNAIWKIANWKNVSERFAK 218 HSP 2 Score: 85.8853 bits (211), Expect = 1.005e-52 Identity = 39/66 (59.09%), Postives = 49/66 (74.24%), Query Frame = 2 Query: 122 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 +LPDLPYDY+ LEP IS EIMQLHHQKHH YV N N+ E+L +A++K + + LQ A+KFNG Sbjct: 27 SLPDLPYDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSKGNVKEAIALQPALKFNG 92
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_PANTR (Superoxide dismutase [Mn], mitochondrial OS=Pan troglodytes GN=SOD2 PE=2 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 1.313e-52 Identity = 71/128 (55.47%), Postives = 86/128 (67.19%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 705 GH+NHSIFW NL+P GGGEP L AI FGS + +K++A +QGSGW WLG + E L + NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK IWNV+NW+ ++ Y Sbjct: 70 GHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 193 HSP 2 Score: 83.5741 bits (205), Expect = 1.313e-52 Identity = 39/66 (59.09%), Postives = 47/66 (71.21%), Query Frame = 2 Query: 122 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 +LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D + + LQ A+KFNG Sbjct: 3 SLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNG 68
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_HYLLA (Superoxide dismutase [Mn], mitochondrial OS=Hylobates lar GN=SOD2 PE=2 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 1.313e-52 Identity = 71/128 (55.47%), Postives = 86/128 (67.19%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 705 GH+NHSIFW NL+P GGGEP L AI FGS + +K++A +QGSGW WLG + E L + NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK IWNV+NW+ ++ Y Sbjct: 70 GHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFDKFKEKLTATSVGVQGSGWGWLGFNKERGHLQIAACPNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 193 HSP 2 Score: 83.5741 bits (205), Expect = 1.313e-52 Identity = 39/66 (59.09%), Postives = 47/66 (71.21%), Query Frame = 2 Query: 122 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 +LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D + + LQ A+KFNG Sbjct: 3 SLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNG 68
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_HORSE (Superoxide dismutase [Mn], mitochondrial OS=Equus caballus GN=SOD2 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 2.227e-52 Identity = 72/128 (56.25%), Postives = 88/128 (68.75%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 705 GH+NH+IFW NL+P GGGEP L AI FGS + +K++A A +QGSGW WLG + + RL + NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK IWNV+NW+ S+ Y Sbjct: 94 GHINHTIFWTNLSP--NGGGEPKGKLLD-AIKRDFGSFDKFKEKLTAVSAGVQGSGWGWLGFNKDQGRLQIVACPNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVSERY 217 HSP 2 Score: 80.8777 bits (198), Expect = 2.227e-52 Identity = 39/69 (56.52%), Postives = 47/69 (68.12%), Query Frame = 2 Query: 113 QTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 Q +LPDL YDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D + + LQ A+KFNG Sbjct: 24 QKHSLPDLQYDYGALEPYINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNG 92
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_CEBAP (Superoxide dismutase [Mn], mitochondrial OS=Cebus apella GN=SOD2 PE=2 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 2.231e-52 Identity = 70/128 (54.69%), Postives = 86/128 (67.19%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 705 GH+NHSIFW NL+P GGGEP L AI FGS + ++++A +QGSGW WLG + E L + NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK IWNV+NW+ ++ Y Sbjct: 70 GHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFDKFKERLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 193 HSP 2 Score: 83.9593 bits (206), Expect = 2.231e-52 Identity = 39/66 (59.09%), Postives = 47/66 (71.21%), Query Frame = 2 Query: 122 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 +LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D + + LQ A+KFNG Sbjct: 3 SLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNDTEEKYKEALAKGDVTAQIALQPALKFNG 68
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_CALJA (Superoxide dismutase [Mn], mitochondrial OS=Callithrix jacchus GN=SOD2 PE=2 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 2.231e-52 Identity = 70/128 (54.69%), Postives = 86/128 (67.19%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 705 GH+NHSIFW NL+P GGGEP L AI FGS + ++++A +QGSGW WLG + E L + NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK IWNV+NW+ ++ Y Sbjct: 70 GHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFDKFKERLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 193 HSP 2 Score: 83.9593 bits (206), Expect = 2.231e-52 Identity = 39/66 (59.09%), Postives = 47/66 (71.21%), Query Frame = 2 Query: 122 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 +LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D + + LQ A+KFNG Sbjct: 3 SLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNDTEEKYKEALAKGDVTAQIALQPALKFNG 68
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_CHLMU (Superoxide dismutase [Mn] OS=Chlamydia muridarum GN=sodA PE=3 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 9.119e-51 Identity = 64/124 (51.61%), Postives = 89/124 (71.77%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPT-LVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKY 690 GH+NHS+FW+ LAP ++GGG PP L I+ +GS + ++ + AA+QGSGW WL + + L+++TTANQDPL +A T ++PLLG+DVWEHAYYLQYKN + DYLKN +++NW Y Sbjct: 74 GHINHSLFWEMLAPQNKGGGTPPRHELLKLIEKFWGSFDNFLKNFISSSAAVQGSGWGWLAFCPKKQELMIQTTANQDPL--EATTGMIPLLGVDVWEHAYYLQYKNARLDYLKNFPSIINWDY 195 HSP 2 Score: 80.8777 bits (198), Expect = 9.119e-51 Identity = 36/65 (55.38%), Postives = 46/65 (70.77%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 LPDLPYDY ALEP IS EIM LHHQKHHQ Y+ N N+A++ L A D + ++ + A++FNG Sbjct: 8 LPDLPYDYDALEPVISAEIMHLHHQKHHQGYINNLNEALKSLDVASATQDLTGLIAINPALRFNG 72
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_RABIT (Superoxide dismutase [Mn], mitochondrial (Fragment) OS=Oryctolagus cuniculus GN=SOD2 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 2.020e-50 Identity = 69/128 (53.91%), Postives = 86/128 (67.19%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 705 GH+NH+IFW NL+P GGGEP L AI FGS + ++++A +QGSGW WLG + E L + ANQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK IWNV+ W+ ++ Y Sbjct: 75 GHINHTIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFDKFKERLTAVSVGVQGSGWGWLGFNKEQGHLQIAACANQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVITWENVTERY 198 HSP 2 Score: 79.337 bits (194), Expect = 2.020e-50 Identity = 37/66 (56.06%), Postives = 46/66 (69.70%), Query Frame = 2 Query: 122 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 +LPDLPYDY ALEP I+ +IM+LHH KHH AYV N N E+ +AL + D + V LQ A+KF G Sbjct: 8 SLPDLPYDYGALEPHINAQIMELHHSKHHAAYVNNLNATEEKYREALARGDVTAHVALQPALKFKG 73
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_CHLPN (Superoxide dismutase [Mn] OS=Chlamydia pneumoniae GN=sodA PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 9.903e-50 Identity = 62/130 (47.69%), Postives = 88/130 (67.69%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 711 GH+NHS+FW+ LAP+ +GGG+PP L I+ +G+++ ++K+ A +QGSGW WLG + LV++ TANQDPL L PLLG+DVWEHAYYLQYKNV+ DYLK ++NW + + + + Sbjct: 74 GHINHSLFWETLAPIDQGGGQPPKHELLSLIERFWGTMDNFLKKLIEVAAGVQGSGWAWLGFCPAKQELVLQATANQDPLEPLTGKL-PLLGVDVWEHAYYLQYKNVRMDYLKAFPQIINWGHIENRFSE 202 HSP 2 Score: 79.337 bits (194), Expect = 9.903e-50 Identity = 35/66 (53.03%), Postives = 49/66 (74.24%), Query Frame = 2 Query: 122 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 +LP+LPYDY ALEP IS EIM LHHQKHHQ Y+ N N A+++L A + + + ++ L+ A++FNG Sbjct: 7 SLPELPYDYDALEPVISSEIMILHHQKHHQIYINNLNAALKRLDAAETQQNLNELIALEPALRFNG 72 The following BLAST results are available for this feature:
BLAST of CN185706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 221
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185706 ID=CN185706; Name=CN185706; organism=Citrus sinensis; type=EST; length=712bpback to top |