CN185706
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM2_CAEEL (Superoxide dismutase [Mn] 2, mitochondrial OS=Caenorhabditis elegans GN=sod-3 PE=1 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 1.681e-49 Identity = 68/126 (53.97%), Postives = 83/126 (65.87%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASD 699 GH+NHSIFW NLA + GGEP + I FGSL+ L +++S A+QGSGW WLG + K L + T ANQDPL +VPL GIDVWEHAYYLQYKNV+PDY+ IW + NWK S+ Sbjct: 94 GHINHSIFWTNLA---KDGGEPSKELMD-TIKRDFGSLDNLQKRLSDITIAVQGSGWGWLGYCKKDKILKIATCANQDPL----EGMVPLFGIDVWEHAYYLQYKNVRPDYVHAIWKIANWKNISE 211 HSP 2 Score: 85.5001 bits (210), Expect = 1.681e-49 Identity = 39/66 (59.09%), Postives = 49/66 (74.24%), Query Frame = 2 Query: 122 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 TLPDLP+DY+ LEP IS EIMQLHHQKHH YV N N+ E+L +A++K + + LQ A+KFNG Sbjct: 27 TLPDLPFDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSKGNLKEAIALQPALKFNG 92
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_CAVPO (Superoxide dismutase [Mn], mitochondrial (Fragment) OS=Cavia porcellus GN=SOD2 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 6.328e-49 Identity = 66/119 (55.46%), Postives = 79/119 (66.39%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVM 678 GH+NHSIFW NL+P GGGEP L AI FGS + +K++A +QGSGW WLG + E L + +NQDPL L+PLLGIDVWEHAYYLQ KNV+PDYLK IW V+ Sbjct: 94 GHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFDKFKEKLTAVSVGVQGSGWGWLGFNKERGCLQIAACSNQDPL-QGTTGLIPLLGIDVWEHAYYLQLKNVRPDYLKAIWKVI 208 HSP 2 Score: 86.2705 bits (212), Expect = 6.328e-49 Identity = 44/76 (57.89%), Postives = 54/76 (71.05%), Query Frame = 2 Query: 95 LGLRGL-QTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 LG+ G+ Q +LPDLPYDY AL+P I+ EIMQLHH KHH AY+ N N A E+ +AL K D + V LQ A+KFNG Sbjct: 17 LGILGVRQKHSLPDLPYDYGALQPHINAEIMQLHHSKHHAAYLNNLNIAEEKYQEALAKGDVTAQVALQPALKFNG 92
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_CHLTR (Superoxide dismutase [Mn] OS=Chlamydia trachomatis GN=sodA PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 6.330e-49 Identity = 63/123 (51.22%), Postives = 86/123 (69.92%), Query Frame = 1 Query: 325 HVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPT-LVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKY 690 H+NHS+FW+ LAP +GGG PP L I+ +GS + ++ AA+QGSGW WL + + L+V+TTANQDPL +A T ++PLLG+DVWEHAYYLQYKN + DYLK+ +++NW Y Sbjct: 75 HINHSLFWEMLAPQGKGGGVPPRHELLKLIEKFWGSFDNFLKNFITSSAAVQGSGWGWLAFCPQKQELMVQTTANQDPL--EATTGMIPLLGVDVWEHAYYLQYKNARMDYLKSFPSIINWDY 195 HSP 2 Score: 79.7221 bits (195), Expect = 6.330e-49 Identity = 36/65 (55.38%), Postives = 46/65 (70.77%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 LP LPYDY ALEP IS EIMQLHHQKHHQ Y+ N N+A++ L A D + ++ + A++FNG Sbjct: 8 LPALPYDYDALEPVISAEIMQLHHQKHHQGYINNLNEALKSLDVANATQDLARLIAINPALRFNG 72
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_DROME (Superoxide dismutase [Mn], mitochondrial OS=Drosophila melanogaster GN=Sod2 PE=2 SV=3) HSP 1 Score: 122.865 bits (307), Expect = 1.401e-48 Identity = 59/130 (45.38%), Postives = 83/130 (63.85%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 711 GH+NH+IFW+NL+P P L AI++ + SLE ++++ A+QGSGW WLG + + +L + NQDPL L+PL GIDVWEHAYYLQYKNV+P Y++ IW++ NW S +Q+ Sbjct: 87 GHINHTIFWQNLSP----NKTQPSDDLKKAIESQWKSLEEFKKELTTLTVAVQGSGWGWLGFNKKSGKLQLAALPNQDPLEASTG-LIPLFGIDVWEHAYYLQYKNVRPSYVEAIWDIANWDDISCRFQE 211 HSP 2 Score: 91.6633 bits (226), Expect = 1.401e-48 Identity = 45/74 (60.81%), Postives = 55/74 (74.32%), Query Frame = 2 Query: 98 GLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 G+RG T LP LPYDY+ALEP I EIM+LHHQKHHQ YV N N A EQL +A +K DT+ ++QL A++FNG Sbjct: 14 GVRGKHT--LPKLPYDYAALEPIICREIMELHHQKHHQTYVNNLNAAEEQLEEAKSKSDTTKLIQLAPALRFNG 85
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_SCHPO (Superoxide dismutase [Mn], mitochondrial OS=Schizosaccharomyces pombe GN=sod2 PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 8.948e-48 Identity = 69/129 (53.49%), Postives = 88/129 (68.22%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHS-SLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 705 GH+NHS+FWK LAP EGGG+P S SL AI + +GSLE ++M+A A++QGSGW WL +D + L + TTANQD +V P ++GID WEHAYY QY+N K +Y K IWNV+NWK A Y Sbjct: 92 GHINHSLFWKILAPQKEGGGKPVTSGSLHKAITSKWGSLEDFQKEMNAALASIQGSGWAWLIVDKDGS-LRITTTANQDTIVKSKP----IIGIDAWEHAYYPQYENRKAEYFKAIWNVINWKEAESRY 215 HSP 2 Score: 77.7962 bits (190), Expect = 8.948e-48 Identity = 43/73 (58.90%), Postives = 49/73 (67.12%), Query Frame = 2 Query: 104 RGLQT-VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 RG+ T TLP LPY Y+ALEPA+S IM+LHH KHHQ YV N N A E+L A +D V LQ AIKFNG Sbjct: 20 RGVHTKATLPPLPYAYNALEPALSETIMKLHHDKHHQTYVNNLNAAQEKL--ADPNLDLEGEVALQAAIKFNG 90
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_CANAL (Superoxide dismutase [Mn], mitochondrial OS=Candida albicans GN=SOD2 PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.648e-46 Identity = 67/127 (52.76%), Postives = 88/127 (69.29%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPH--SSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLD-TEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYA 693 G++NH ++WKNLAPV +GGG+PP S LG I FGSL+ LI+ + + A +QGSGW ++ + + V TTANQD + P LVPL+ ID WEHAYYLQY+NVK DY KN+W+V+NWK A Sbjct: 104 GYLNHCLWWKNLAPVSQGGGQPPSEDSKLGKQIVKQFGSLDKLIEITNGKLAGIQGSGWAFIVKNKANGDTIDVITTANQDTVTD--PNLVPLIAIDAWEHAYYLQYQNVKADYFKNLWHVINWKEA 228 HSP 2 Score: 73.1738 bits (178), Expect = 1.648e-46 Identity = 32/66 (48.48%), Postives = 47/66 (71.21%), Query Frame = 2 Query: 122 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 +LP+L Y++SA EP ISG+I ++H+ KHHQ YV N N ++EQ +A +K + +V L+ AI FNG Sbjct: 37 SLPELDYEFSATEPYISGQINEIHYTKHHQTYVNNLNASIEQAVEAKSKGEVKKLVALEKAINFNG 102
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_CHAFE (Superoxide dismutase [Mn], mitochondrial OS=Charybdis feriatus PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 2.149e-46 Identity = 64/114 (56.14%), Postives = 77/114 (67.54%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPT-LVPLLGIDVWEHAYYLQYKNVKPDYLK 660 GH+NHSIFW+NL+ GGEP L AI+ FGS+E + ++SA+ A+QGSGW WLG E L + T NQDPL +A T LVPL GIDVWEHAYYLQYKNV+ LK Sbjct: 90 GHINHSIFWQNLSA---DGGEPEGELLA-AINRDFGSVENMKNQLSAQTVAVQGSGWGWLGYIAE-GALQIATCPNQDPL--EATTGLVPLFGIDVWEHAYYLQYKNVRRIMLK 196 HSP 2 Score: 95.9005 bits (237), Expect = 2.149e-46 Identity = 47/79 (59.49%), Postives = 55/79 (69.62%), Query Frame = 2 Query: 83 KSVGLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 +S+ GL Q TLPDLPYDY ALEP IS EIMQLHH KHHQ YV N N A E+L +A K D ST++ L A++FNG Sbjct: 10 RSLRAGLWCRQKHTLPDLPYDYGALEPTISAEIMQLHHSKHHQTYVNNLNVAEEKLAEAKEKGDVSTIISLAPALRFNG 88
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_GANMI (Superoxide dismutase [Mn], mitochondrial OS=Ganoderma microsporum PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 2.806e-46 Identity = 67/128 (52.34%), Postives = 89/128 (69.53%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHE----GGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYA 693 GH+NHS+FWKNLAP GG L AI+ ++GS++ I++ +A AA+QGSGW WLGL+ KRL + TTANQDPL++ VP++G+D+WEHA+YLQY NVK DYL IW V+N+K A Sbjct: 68 GHINHSLFWKNLAPAKSEGKGNGGALADGPLKSAIEQNWGSVDNFIKEFNATTAAIQGSGWGWLGLNPATKRLEITTTANQDPLLSH----VPIIGVDIWEHAFYLQYLNVKADYLAAIWIVINFKEA 191 HSP 2 Score: 69.3218 bits (168), Expect = 2.806e-46 Identity = 37/66 (56.06%), Postives = 44/66 (66.67%), Query Frame = 2 Query: 125 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDT-STVVQLQGAIKFNG 319 LPDLPY Y+ALEP IS +IM+LHH+KHHQ YV + N A QA K T + LQ A+KFNG Sbjct: 5 LPDLPYAYNALEPFISQQIMELHHKKHHQTYVNSLNAAE----QAYAKASTPKERIALQSALKFNG 66
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_YEAST (Superoxide dismutase [Mn], mitochondrial OS=Saccharomyces cerevisiae GN=SOD2 PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.291e-44 Identity = 67/126 (53.17%), Postives = 84/126 (66.67%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLD-TEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 696 G NH +FW+NLAP +GGGEPP +L AID FGSL+ LI+ + + A +QGSGW ++ + + +L V T NQD T LVPL+ ID WEHAYYLQY+N K DY K IWNV+NWK AS Sbjct: 103 GFTNHCLFWENLAPESQGGGEPPTGALAKAIDEQFGSLDELIKLTNTKLAGVQGSGWAFIVKNLSNGGKLDVVQTYNQD---TVTGPLVPLVAIDAWEHAYYLQYQNKKADYFKAIWNVVNWKEAS 225 HSP 2 Score: 68.1662 bits (165), Expect = 3.291e-44 Identity = 42/100 (42.00%), Postives = 56/100 (56.00%), Query Frame = 2 Query: 56 ATRKAIGLGKSVGLGLRGLQT----VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKV--------DTSTVVQLQGAIKFNG 319 A A L K GL L VTLPDL +D+ ALEP ISG+I +LH+ KHHQ YV +N AV+Q FQ L+ + + ++ +Q IKF+G Sbjct: 3 AKTAAANLTKKGGLSLLSTTARRTKVTLPDLKWDFGALEPYISGQINELHYTKHHQTYVNGFNTAVDQ-FQELSDLLAKEPSPANARKMIAIQQNIKFHG 101
BLAST of CN185706 vs. ExPASy Swiss-Prot
Match: SODM_DEBHA (Probable superoxide dismutase [Mn], mitochondrial OS=Debaryomyces hansenii GN=DEHA2E01232g PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.615e-43 Identity = 65/128 (50.78%), Postives = 85/128 (66.41%), Query Frame = 1 Query: 322 GHVNHSIFWKNLAPVHEGGGEPPHS--SLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFK-RLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 696 GH NH +FWK+LAP + GG+ P S +LG I +GS++ LI +A+ A++QGSGW ++ + + L V TT NQD T LVPL+ ID WEHAYYLQY+NVK DY K IWNV+NW+ AS Sbjct: 80 GHTNHVLFWKSLAPNSQNGGKHPGSDTNLGKKIIEQYGSIDNLISITNAKLASIQGSGWAFIVKNKQNGGNLDVVTTYNQD---TVTDPLVPLIAIDAWEHAYYLQYQNVKADYFKAIWNVINWEEAS 204 HSP 2 Score: 75.0998 bits (183), Expect = 1.615e-43 Identity = 33/71 (46.48%), Postives = 47/71 (66.20%), Query Frame = 2 Query: 107 GLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNG 319 G + LP L + Y +LEP ISG+I ++HH+KHHQ YV YN A+EQL +A ++ D + +Q IKF+G Sbjct: 8 GKNKIELPQLDWAYDSLEPYISGKINEIHHKKHHQTYVNGYNSAIEQLIEAESQGDVKKAIVIQQNIKFHG 78 The following BLAST results are available for this feature:
BLAST of CN185706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 221
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185706 ID=CN185706; Name=CN185706; organism=Citrus sinensis; type=EST; length=712bpback to top |