CN185705
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_CHLPN (Superoxide dismutase [Mn] OS=Chlamydia pneumoniae GN=sodA PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.831e-32 Identity = 62/130 (47.69%), Postives = 88/130 (67.69%), Query Frame = -2 Query: 315 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 704 GH+NHS+FW+ LAP+ +GGG+PP L I+ +G+++ ++K+ A +QGSGW WLG + LV++ TANQDPL L PLLG+DVWEHAYYLQYKNV+ DYLK ++NW + + + + Sbjct: 74 GHINHSLFWETLAPIDQGGGQPPKHELLSLIERFWGTMDNFLKKLIEVAAGVQGSGWAWLGFCPAKQELVLQATANQDPLEPLTGKL-PLLGVDVWEHAYYLQYKNVRMDYLKAFPQIINWGHIENRFSE 202
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_AGABI (Superoxide dismutase [Mn], mitochondrial OS=Agaricus bisporus GN=sod PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.308e-32 Identity = 65/128 (50.78%), Postives = 86/128 (67.19%), Query Frame = -2 Query: 321 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 704 GH+NHS+FW+NLAP GG+ L AID FG L+ L ++ + A +QGSGW WLG++ KRL + TT NQDPL+ LVP++G+D+WEHA+YLQY NVK DYL IW+V+N+ A Y Sbjct: 68 GHINHSLFWQNLAPAAGAGGQLKPGPLKDAIDQTFGGLDNLKKEFNTTTAGIQGSGWGWLGVNPSNKRLEISTTPNQDPLL----NLVPIIGVDIWEHAFYLQYLNVKADYLNAIWSVINFDEAQRRY 191
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_GANMI (Superoxide dismutase [Mn], mitochondrial OS=Ganoderma microsporum PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 8.238e-32 Identity = 67/128 (52.34%), Postives = 89/128 (69.53%), Query Frame = -2 Query: 333 GHVNHSIFWKNLAPVHE----GGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYA 704 GH+NHS+FWKNLAP GG L AI+ ++GS++ I++ +A AA+QGSGW WLGL+ KRL + TTANQDPL++ VP++G+D+WEHA+YLQY NVK DYL IW V+N+K A Sbjct: 68 GHINHSLFWKNLAPAKSEGKGNGGALADGPLKSAIEQNWGSVDNFIKEFNATTAAIQGSGWGWLGLNPATKRLEITTTANQDPLLSH----VPIIGVDIWEHAFYLQYLNVKADYLAAIWIVINFKEA 191
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_CHLTR (Superoxide dismutase [Mn] OS=Chlamydia trachomatis GN=sodA PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.397e-31 Identity = 63/123 (51.22%), Postives = 86/123 (69.92%), Query Frame = -2 Query: 336 HVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPT-LVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKY 701 H+NHS+FW+ LAP +GGG PP L I+ +GS + ++ AA+QGSGW WL + + L+V+TTANQDPL +A T ++PLLG+DVWEHAYYLQYKN + DYLK+ +++NW Y Sbjct: 75 HINHSLFWEMLAPQGKGGGVPPRHELLKLIEKFWGSFDNFLKNFITSSAAVQGSGWGWLAFCPQKQELMVQTTANQDPL--EATTGMIPLLGVDVWEHAYYLQYKNARMDYLKSFPSIINWDY 195
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_SCHPO (Superoxide dismutase [Mn], mitochondrial OS=Schizosaccharomyces pombe GN=sod2 PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 4.092e-31 Identity = 69/129 (53.49%), Postives = 88/129 (68.22%), Query Frame = -2 Query: 321 GHVNHSIFWKNLAPVHEGGGEPPHS-SLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 704 GH+NHS+FWK LAP EGGG+P S SL AI + +GSLE ++M+A A++QGSGW WL +D + L + TTANQD +V P ++GID WEHAYY QY+N K +Y K IWNV+NWK A Y Sbjct: 92 GHINHSLFWKILAPQKEGGGKPVTSGSLHKAITSKWGSLEDFQKEMNAALASIQGSGWAWLIVDKDGS-LRITTTANQDTIVKSKP----IIGIDAWEHAYYPQYENRKAEYFKAIWNVINWKEAESRY 215 HSP 2 Score: 21.9422 bits (45), Expect = 4.092e-31 Identity = 10/17 (58.82%), Postives = 11/17 (64.71%), Query Frame = -3 Query: 707 VDTSTVVQLQGAIKFNG 757 +D V LQ AIKFNG Sbjct: 74 LDLEGEVALQAAIKFNG 90
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_CANAL (Superoxide dismutase [Mn], mitochondrial OS=Candida albicans GN=SOD2 PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.974e-31 Identity = 67/127 (52.76%), Postives = 88/127 (69.29%), Query Frame = -2 Query: 333 GHVNHSIFWKNLAPVHEGGGEPPH--SSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLD-TEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYA 704 G++NH ++WKNLAPV +GGG+PP S LG I FGSL+ LI+ + + A +QGSGW ++ + + V TTANQD + P LVPL+ ID WEHAYYLQY+NVK DY KN+W+V+NWK A Sbjct: 104 GYLNHCLWWKNLAPVSQGGGQPPSEDSKLGKQIVKQFGSLDKLIEITNGKLAGIQGSGWAFIVKNKANGDTIDVITTANQDTVTD--PNLVPLIAIDAWEHAYYLQYQNVKADYFKNLWHVINWKEA 228
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM2_CAEEL (Superoxide dismutase [Mn] 2, mitochondrial OS=Caenorhabditis elegans GN=sod-3 PE=1 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 3.461e-30 Identity = 68/126 (53.97%), Postives = 83/126 (65.87%), Query Frame = -2 Query: 327 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASD 704 GH+NHSIFW NLA + GGEP + I FGSL+ L +++S A+QGSGW WLG + K L + T ANQDPL +VPL GIDVWEHAYYLQYKNV+PDY+ IW + NWK S+ Sbjct: 94 GHINHSIFWTNLA---KDGGEPSKELMD-TIKRDFGSLDNLQKRLSDITIAVQGSGWGWLGYCKKDKILKIATCANQDPL----EGMVPLFGIDVWEHAYYLQYKNVRPDYVHAIWKIANWKNISE 211
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_YEAST (Superoxide dismutase [Mn], mitochondrial OS=Saccharomyces cerevisiae GN=SOD2 PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.520e-30 Identity = 67/126 (53.17%), Postives = 84/126 (66.67%), Query Frame = -2 Query: 330 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLD-TEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 704 G NH +FW+NLAP +GGGEPP +L AID FGSL+ LI+ + + A +QGSGW ++ + + +L V T NQD T LVPL+ ID WEHAYYLQY+N K DY K IWNV+NWK AS Sbjct: 103 GFTNHCLFWENLAPESQGGGEPPTGALAKAIDEQFGSLDELIKLTNTKLAGVQGSGWAFIVKNLSNGGKLDVVQTYNQD---TVTGPLVPLVAIDAWEHAYYLQYQNKKADYFKAIWNVVNWKEAS 225
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODF_TETPY (Superoxide dismutase [Fe] OS=Tetrahymena pyriformis PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.718e-29 Identity = 68/161 (42.24%), Postives = 92/161 (57.14%), Query Frame = -2 Query: 321 NKAVEQLFSSFEQSRHFHRRPVAGRYQVQRRGHVNHSIFWKNLAPVHEGGGEPP--HSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 797 N EQ+ ++ +++ + + GHVNH I+W NLAPV GGG P HS L AI +GS E I + AA+QGSGW WLG DT K L + NQD + + ++VPLL IDVWEHAYYL Y+N++P YL +W ++NW+ Y Sbjct: 33 NATYEQIAAATKENDAHKIATLQSALRFNLGGHVNHWIYWDNLAPVKSGGGVLPDEHSPLTKAIKEKWGSYENFITLFNTRTAAIQGSGWGWLGYDTVSKSLRLFELGNQD--MPEWSSIVPLLTIDVWEHAYYLDYQNLRPKYLTEVWKIVNWREVEKRY 191
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_CAVPO (Superoxide dismutase [Mn], mitochondrial (Fragment) OS=Cavia porcellus GN=SOD2 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.243e-29 Identity = 66/119 (55.46%), Postives = 79/119 (66.39%), Query Frame = -2 Query: 348 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVM 704 GH+NHSIFW NL+P GGGEP L AI FGS + +K++A +QGSGW WLG + E L + +NQDPL L+PLLGIDVWEHAYYLQ KNV+PDYLK IW V+ Sbjct: 94 GHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFDKFKEKLTAVSVGVQGSGWGWLGFNKERGCLQIAACSNQDPL-QGTTGLIPLLGIDVWEHAYYLQLKNVRPDYLKAIWKVI 208 The following BLAST results are available for this feature:
BLAST of CN185705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 213
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185705 ID=CN185705; Name=CN185705; organism=Citrus sinensis; type=EST; length=798bpback to top |