CN185705
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_THET2 (Superoxide dismutase [Mn] OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=sodA PE=3 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 3.582e-27 Identity = 62/130 (47.69%), Postives = 83/130 (63.85%), Query Frame = -2 Query: 315 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 704 GH+NHS+FW+ L P GG + P L AID FG +AL +K++ GSGW WL D F +L V +T NQD V + T P++GIDVWEHAYYL+Y+N + DYL+ IWNV+NW A + ++K Sbjct: 80 GHLNHSLFWRLLTP---GGAKEPVGELKKAIDEQFGGFQALKEKLTQAAMGRFGSGWAWLVKDP-FGKLHVLSTPNQDNPVMEGFT--PIVGIDVWEHAYYLKYQNRRADYLQAIWNVLNWDVAEEFFKK 203
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_MYCLP (Superoxide dismutase [Mn] OS=Mycobacterium lepraemurium GN=sodA PE=3 SV=3) HSP 1 Score: 121.709 bits (304), Expect = 4.678e-27 Identity = 61/121 (50.41%), Postives = 76/121 (62.81%), Query Frame = -2 Query: 342 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 704 GHVNHS++WKNL+P GG+ P L AID FGS + + SA LQGSGW LG DT RL+ +Q V ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW Sbjct: 72 GHVNHSLWWKNLSP---DGGDKPTGELAAAIDDAFGSFDKFRAQFSAAANGLQGSGWAVLGYDTLGSRLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNW 187
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_MYCFO (Superoxide dismutase [Mn] OS=Mycobacterium fortuitum GN=sodA PE=3 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 4.678e-27 Identity = 61/128 (47.66%), Postives = 79/128 (61.72%), Query Frame = -2 Query: 321 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 704 GHVNHSI+WKNL+P GG+ P L AID FGS + + +A LQGSGW LG D+ RL+ +Q V ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW+ + Y Sbjct: 72 GHVNHSIWWKNLSP---NGGDKPTGDLAAAIDDQFGSFDKFQAQFTAAANGLQGSGWAVLGYDSLGDRLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNWEDVQNRY 194
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_MYCLE (Superoxide dismutase [Mn] OS=Mycobacterium leprae GN=sodA PE=3 SV=3) HSP 1 Score: 120.553 bits (301), Expect = 1.042e-26 Identity = 60/121 (49.59%), Postives = 76/121 (62.81%), Query Frame = -2 Query: 342 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 704 GHVNHSI+WKNL+P GG+ P L ID FGS + + SA LQGSGW LG DT +L+ +Q V+ ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW Sbjct: 72 GHVNHSIWWKNLSP---NGGDKPTGGLATDIDETFGSFDKFRAQFSAAANGLQGSGWAVLGYDTLGNKLLTFQLYDQQANVSLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNW 187
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_ASPFU (Superoxide dismutase [Mn], mitochondrial OS=Aspergillus fumigatus GN=sodB PE=1 SV=3) HSP 1 Score: 119.013 bits (297), Expect = 1.573e-26 Identity = 59/129 (45.74%), Postives = 77/129 (59.69%), Query Frame = -2 Query: 321 GHVNHSIFWKNLAPVHEGGGEPPHSS-LGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 704 GH+NHS+FWKNLAP GGG+ + L AI+ +GS + + +QGSGW WL D +L + TT +QDP+ AP + G+D+WEHAYYLQY N K Y K IWNV+NW A + Y Sbjct: 73 GHINHSLFWKNLAPEKSGGGKIDQAPVLKAAIEQRWGSFDKFKDAFNTTLLGIQGSGWGWLVTDGPKGKLDITTTHDQDPVTGAAP----VFGVDMWEHAYYLQYLNDKASYAKGIWNVINWAEAENRY 197 HSP 2 Score: 21.557 bits (44), Expect = 1.573e-26 Identity = 9/16 (56.25%), Postives = 11/16 (68.75%), Query Frame = -3 Query: 707 DTSTVVQLQGAIKFNG 754 D +V +Q AIKFNG Sbjct: 56 DVPKLVSVQQAIKFNG 71
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_MYCSM (Superoxide dismutase [Mn] OS=Mycobacterium smegmatis GN=sodA PE=1 SV=4) HSP 1 Score: 119.783 bits (299), Expect = 1.778e-26 Identity = 59/121 (48.76%), Postives = 76/121 (62.81%), Query Frame = -2 Query: 342 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 704 GH+NHSI+WKNL+P GG+ P L AID FGS + + +A LQGSGW LG D+ RL+ +Q V ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW Sbjct: 72 GHINHSIWWKNLSP---NGGDKPTGELAAAIDDQFGSFDKFQAQFTAAANGLQGSGWAVLGYDSLGGRLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNW 187
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_MYCS2 (Superoxide dismutase [Mn] OS=Mycobacterium smegmatis GN=sodA PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.778e-26 Identity = 59/121 (48.76%), Postives = 76/121 (62.81%), Query Frame = -2 Query: 342 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 704 GH+NHSI+WKNL+P GG+ P L AID FGS + + +A LQGSGW LG D+ RL+ +Q V ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW Sbjct: 72 GHINHSIWWKNLSP---NGGDKPTGELAAAIDDQFGSFDKFQAQFTAAANGLQGSGWAVLGYDSLGGRLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNW 187
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM1_PLEBO (Superoxide dismutase [Mn] 1 OS=Plectonema boryanum GN=sodA1 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.778e-26 Identity = 63/147 (42.86%), Postives = 92/147 (62.59%), Query Frame = -2 Query: 321 RHFHRRPVAGRYQVQRRG--HVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 755 ++ ++ P A R +++ G HVNH++FW+ +AP + GG P ++ AID FGS +A Q+ + GA GSGW WL D + K L + +TANQD + P P+LG DVWEHAYYL+Y+N + +YL N WNV+NW+ + Y Sbjct: 100 QNLNQVPEAIRTKIRNNGGGHVNHTMFWQIMAP--KAGGTPT-GAVAKAIDQTFGSFDAFKQQFNKAGADRFGSGWAWLVSDRQGK-LSITSTANQDNPLMSNPNAYPILGNDVWEHAYYLKYQNRRAEYLTNWWNVVNWQAVNQRY 242
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_GLOMM (Superoxide dismutase [Mn], mitochondrial OS=Glossina morsitans morsitans GN=Sod2 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.755e-26 Identity = 58/128 (45.31%), Postives = 77/128 (60.16%), Query Frame = -2 Query: 321 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 704 GH+NHSI+W+NL+P P + L AI+ F S E + +SA +QGSGW WLG + + K+L + +NQ+PL LVPL IDVWEHAYYLQ KN Y++ W++ NWK SD Y Sbjct: 88 GHLNHSIYWQNLSPTKS----EPSADLKKAIEEQFSSFEQFKKDLSALSIGVQGSGWGWLGYNKKXKKLQILAVSNQEPLQA-VTGLVPLFAIDVWEHAYYLQXKNXXAKYVEAXWDIANWKBISDRY 210
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODF_METJ (Superoxide dismutase [Mn/Fe] OS=Methylomonas J GN=sodB PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.755e-26 Identity = 67/161 (41.61%), Postives = 90/161 (55.90%), Query Frame = -2 Query: 315 NKAVEQLFSSFEQSRHFHRRPVAGRYQVQRRGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 797 N+ VE L + R PV GH NHS+FWK L P GGGEP +L AI + G L+ + + GSGW WL + E K+LVVE+T NQD ++ T P+LG+DVWEHAYYL+Y+N +P+Y+ +NV+NW S YQ+ Sbjct: 49 NEPVEALLQKLDSLPENLRGPVRNN----GGGHANHSLFWKVLTP--NGGGEPK-GALADAIKSDIGGLDTFKEAFTKAALTRFGSGWAWLSVTPE-KKLVVESTGNQDSPLSTGNT--PILGLDVWEHAYYLKYQNRRPEYIGAFFNVVNWDEVSRRYQE 199 The following BLAST results are available for this feature:
BLAST of CN185705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 213
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185705 ID=CN185705; Name=CN185705; organism=Citrus sinensis; type=EST; length=798bpback to top |