CN185705
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_LISMO (Superoxide dismutase [Mn] OS=Listeria monocytogenes GN=sodA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 7.468e-25 Identity = 58/156 (37.18%), Postives = 94/156 (60.26%), Query Frame = -2 Query: 330 NKAVEQLFSSFEQSRHFHRRPVAGRYQVQRRGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 797 +K+ E+L ++ + + G + GH NH++FW L+P GG P +L AI++ FG+ + +K +A AA GSGW WL ++ +L + +TANQD ++ T P+LG+DVWEHAYYL+++N +P+Y++ WNV+NW A+ Sbjct: 51 SKSAEELVTNLDSVPE----DIRGAVRNHGGGHANHTLFWSILSP---NGGGAPTGNLKAAIESEFGTFDEFKEKFNAAAAARFGSGWAWLVVNDG--KLEIVSTANQDSPLSDGKT--PVLGLDVWEHAYYLKFQNRRPEYIETFWNVINWDEAN 195
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_ASPOR (Superoxide dismutase [Mn], mitochondrial OS=Aspergillus oryzae GN=sodB PE=3 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 9.754e-25 Identity = 57/131 (43.51%), Postives = 79/131 (60.31%), Query Frame = -2 Query: 318 GHVNHSIFWKNLAP--VHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 704 GH+NHS+FWKNLAP E + L AI+ +GS+E + A LQGSGW WL + +L + +T +QDP+ K VP+ G+D+WEHAYYLQY N K Y++ IW V+NW+ A D ++ Sbjct: 73 GHINHSLFWKNLAPHASPETNIDQAAPVLKAAIEAQYGSVEKFKEAFGATLLGLQGSGWGWLVANGPGGKLEIVSTKDQDPVTDK----VPVFGVDMWEHAYYLQYFNNKASYVEGIWKVLNWRTAEDRFK 199
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_LISIN (Superoxide dismutase [Mn] OS=Listeria innocua GN=sodA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.274e-24 Identity = 59/155 (38.06%), Postives = 91/155 (58.71%), Query Frame = -2 Query: 330 KAVEQLFSSFEQSRHFHRRPVAGRYQVQRRGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 794 K VE+L ++ + + G + GH NH++FW L+P GG P L AI++ FG+ + +K +A AA GSGW WL ++ +L + +TANQD ++ T P+LG+DVWEHAYYL+++N +P+Y+ WNV+NW A+ Sbjct: 52 KPVEELVANLDSVPE----DIRGAVRNHGGGHANHTLFWSILSP---NGGGAPTGDLKSAIESEFGTFDDFKEKFNAAAAARFGSGWAWLVVNNG--KLEIVSTANQDSPLSDGKT--PVLGLDVWEHAYYLKFQNRRPEYIDTFWNVVNWDEAN 195
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_HAEIN (Superoxide dismutase [Mn] OS=Haemophilus influenzae GN=sodA PE=1 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 1.274e-24 Identity = 56/134 (41.79%), Postives = 79/134 (58.96%), Query Frame = -2 Query: 312 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLV---PLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKE 704 GH NHS+FWK+L G +L AI+ FGS++A + A GSGW WL L E K VV T +PL+ K PLLG+DVWEHAYYL+++N +PDY+K WNV+NW + ++ ++++ Sbjct: 79 GHTNHSLFWKSLKK-----GTTLQGALKDAIERDFGSVDAFKAEFEKAAATRFGSGWAWLVLTAEGKLAVVSTANQDNPLMGKEVAGCEGFPLLGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDFVAERFEQK 207
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_CHLRE (Superoxide dismutase [Mn], mitochondrial OS=Chlamydomonas reinhardtii GN=SODA PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.274e-24 Identity = 56/133 (42.11%), Postives = 83/133 (62.41%), Query Frame = -2 Query: 318 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKAPTL---VPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 704 GH NHS FWK + G P+ + AI+ FGS++ + K +A A GSGW WL + + L +++T NQD PL+T P + +PLLG+DVWEHAYYL+Y+N +P+Y+ WNV+NW+ ++ Y+ Sbjct: 80 GHYNHSFFWKVMTNPSNTNG--PNGDVKAAIEASFGSVDEMKAKFNAAAAGRFGSGWAWLSVKPDGS-LSIDSTPNQDNPLMTALPDVAGGIPLLGLDVWEHAYYLKYQNRRPEYIAAWWNVVNWEQVAENYK 209
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_MYCKA (Superoxide dismutase [Mn] (Fragment) OS=Mycobacterium kansasii GN=sodA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.664e-24 Identity = 57/122 (46.72%), Postives = 75/122 (61.48%), Query Frame = -2 Query: 342 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPT-LVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 704 GHVNH+I+WKNL+P GG+ P L AID FGS + + A +QGSGW LG DT +L++ + T P ++PLL +D+WEHA+YLQYKNVK D+ K WNV+NW Sbjct: 46 GHVNHTIWWKNLSP---NGGDKPTGELAAAIDEAFGSFDKFRAQFHAAATTVQGSGWAALGWDTLGNKLLIFQVYDHQ---TNFPLGIIPLLLLDMWEHAFYLQYKNVKVDFAKAFWNVVNW 161
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_STAES (Superoxide dismutase [Mn/Fe] OS=Staphylococcus epidermidis (strain ATCC 12228) GN=sodA PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.173e-24 Identity = 55/128 (42.97%), Postives = 82/128 (64.06%), Query Frame = -2 Query: 321 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 704 GH+NHS+FW+ L+P E GE I +GSL+ ++ + + AA GSGW WL ++ +L + TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ +++Y Sbjct: 77 GHLNHSLFWELLSPNSEEKGEVVDK-----IKEQWGSLDEFKKEFADKAAARFGSGWAWLVVNNG--QLEIVTTPNQDNPITEGKT--PILGLDVWEHAYYLKYQNKRPDYINAFWNVVNWEKVNELY 195
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_STAEQ (Superoxide dismutase [Mn/Fe] OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=sodA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.173e-24 Identity = 55/128 (42.97%), Postives = 82/128 (64.06%), Query Frame = -2 Query: 321 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 704 GH+NHS+FW+ L+P E GE I +GSL+ ++ + + AA GSGW WL ++ +L + TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ +++Y Sbjct: 77 GHLNHSLFWELLSPNSEEKGEVVDK-----IKEQWGSLDEFKKEFADKAAARFGSGWAWLVVNNG--QLEIVTTPNQDNPITEGKT--PILGLDVWEHAYYLKYQNKRPDYINAFWNVVNWEKVNELY 195
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_PROFR (Superoxide dismutase [Mn/Fe] OS=Propionibacterium freudenreichii subsp. shermanii GN=sodA PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.173e-24 Identity = 58/121 (47.93%), Postives = 73/121 (60.33%), Query Frame = -2 Query: 342 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 704 GHVNHS+FWKN+AP E P LG AID FGS + + + +A +QGSGW L D KR + T D +PLL +D+WEHA+YLQYKNVK DY+K+ WNV+NW Sbjct: 71 GHVNHSVFWKNMAP-KGSAPERPTDELGAAIDEFFGSFDNMKAQFTAAATGIQGSGWASLVWDPLGKR--INTLQFYDHQNNLPAGSIPLLQLDMWEHAFYLQYKNVKGDYVKSWWNVVNW 188
BLAST of CN185705 vs. ExPASy Swiss-Prot
Match: SODM_XANCP (Superoxide dismutase [Mn] OS=Xanthomonas campestris pv. campestris GN=sodA PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.841e-24 Identity = 56/121 (46.28%), Postives = 77/121 (63.64%), Query Frame = -2 Query: 342 GHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 704 GH NHS+FW ++P GGGEP + AID G E + + + GSGW WL + T K++VVE+TANQD + + T P+LG+DVWEHAYYL+Y+N +PDY+ +NV+NW Sbjct: 77 GHANHSLFWTVMSP--NGGGEPK-GEVAKAIDKDIGGFEKFKEAFTKAALSRFGSGWAWLSV-TPDKKVVVESTANQDSPLFEGNT--PILGLDVWEHAYYLKYQNRRPDYIGAFYNVVNW 191 The following BLAST results are available for this feature:
BLAST of CN185705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 213
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185705 ID=CN185705; Name=CN185705; organism=Citrus sinensis; type=EST; length=798bpback to top |