CN185546

Overview
NameCN185546
Unique NameCN185546
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length760
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10630 contig Csv1_Contig10630:554..1313. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185546 vs. ExPASy Swiss-Prot
Match: UCP1_CANFA (Mitochondrial brown fat uncoupling protein 1 OS=Canis familiaris GN=UCP1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.041e-12
Identity = 53/168 (31.55%), Postives = 75/168 (44.64%), Query Frame = -2
Query:  253 PFEVVKIRLQQQRGLSLELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRNGTNQAAMFTAKNAFDVLLWKKH-EGDGKVLQPWQSMISGFLAGTAGPVCTGPFDVVKTRLMAQSRGGGELKYKGMVHAIRTIYAEEGLLALWKGLLPRLMRIPPGQAIMWAVADQV 753
            P EVVK+RLQ Q  L     +Y G  +  R+I   EGL GLW G  P +MRN           +     L K H   D          +S  +AG    V + P DVVKTR +         +Y  + +   T+  +EG LA +KG +P  +R+     IM+   +Q+
Sbjct:  135 PTEVVKVRLQAQSHLHGRKPRYTGTYNAYRIIATTEGLTGLWKGTTPNLMRNVIINCTELVTYDLMKEALVKNHLLADDLPCH----FLSALVAGFCTTVLSSPVDVVKTRFV----NSVPEQYTSVPNCAMTMLTKEGPLAFFKGFVPSFLRLGSWNVIMFVCFEQL 294          
BLAST of CN185546 vs. ExPASy Swiss-Prot
Match: TXTP_YEAST (Tricarboxylate transport protein OS=Saccharomyces cerevisiae GN=CTP1 PE=2 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 1.041e-12
Identity = 51/174 (29.31%), Postives = 77/174 (44.25%), Query Frame = -2
Query:  253 VTPFEVVKIRLQQQRGLSLELLKY----KGPIHCARMIIREEGLFGLWAGAAPTVMRNGTNQAAMFTAKNAFDVLLWKKHEGD-GKVLQPWQSMISGFLAGTAGPVCTGPFDVVKTRLMAQSRGGGELKYKGMVHAIRTIYAEEGLLALWKGLLPRLMRIPPGQAIMWAVADQV 759
            VTPFE +K  L   +  +    KY    +G +     ++R++G  GL+ G  P  MR   NQA      N    L+    +    K L    + + G  +G      T P D VKTR+ +        KY   ++   TI+ EEGL   WKG  PRL R+     I++ + ++V
Sbjct:  127 VTPFEAIKTALIDDKQSATP--KYHNNGRGVVRNYSSLVRDKGFSGLYRGVLPVSMRQAANQAVRLGCYNKIKTLIQDYTDSPKDKPLSSGLTFLVGAFSGIVTVYSTMPLDTVKTRMQSLD----STKYSSTMNCFATIFKEEGLKTFWKGATPRLGRLVLSGGIVFTIYEKV 294          
BLAST of CN185546 vs. ExPASy Swiss-Prot
Match: MFTC_HUMAN (Mitochondrial folate transporter/carrier OS=Homo sapiens GN=SLC25A32 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.041e-12
Identity = 53/153 (34.64%), Postives = 71/153 (46.41%), Query Frame = -2
Query:  304 PFEVVKIRLQQQRGLSLELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRNGTNQAAMFTAKNAFDVLLWKKHEGDGKVLQPWQSMISGFLAGTAGPVCTGPFDVVKTRLMAQSR---GGGELKYKGMVHAIRTIYAEEGLLALWKGLLPRL 753
            P ++VKIR     GL L   KY G +HC   I + +GL GL+ G  P +   G +    F   NA       K EG  + L+  + ++S   AG      T P  V KTRLM Q          +YKGM   +  IY  EG+  L+KG +P L
Sbjct:   42 PLDLVKIRFAVSDGLELRP-KYNGILHCLTTIWKLDGLRGLYQGVTPNIWGAGLSWGLYFFFYNAIKSY---KTEGRAERLEATEYLVSAAEAGAMTLCITNPLWVTKTRLMLQYDAVVNSPHRQYKGMFDTLVKIYKYEGVRGLYKGFVPGL 190          
BLAST of CN185546 vs. ExPASy Swiss-Prot
Match: UCP1_HUMAN (Mitochondrial brown fat uncoupling protein 1 OS=Homo sapiens GN=UCP1 PE=2 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 1.359e-12
Identity = 54/171 (31.58%), Postives = 77/171 (45.03%), Query Frame = -2
Query:  253 PFEVVKIRLQQQRGLSLELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMR----NGTNQAAMFTAKNAFDVLLWKKHEGDGKVLQPWQSMISGFLAGTAGPVCTGPFDVVKTRLMAQSRGGGELKYKGMVHAIRTIYAEEGLLALWKGLLPRLMRIPPGQAIMWAVADQV 753
            P EVVK+RLQ Q  L     +Y G  +  R+I   EGL GLW G  P +MR    N T        K AF   +      D         ++S  +AG      + P DVVKTR +    G    +YK + +    ++  EG  A +KGL+P  +R+     IM+   +Q+
Sbjct:  133 PTEVVKVRLQAQSHLHGIKPRYTGTYNAYRIIATTEGLTGLWKGTTPNLMRSVIINCTELVTYDLMKEAF---VKNNILADDVPCH----LVSALIAGFCATAMSSPVDVVKTRFINSPPG----QYKSVPNCAMKVFTNEGPTAFFKGLVPSFLRLGSWNVIMFVCFEQL 292          
BLAST of CN185546 vs. ExPASy Swiss-Prot
Match: MCFW_DICDI (Mitochondrial substrate carrier family protein W OS=Dictyostelium discoideum GN=mcfW PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.359e-12
Identity = 47/156 (30.13%), Postives = 79/156 (50.64%), Query Frame = -2
Query:  295 TPFEVVKIRLQQQRGLSLELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRNGTNQAAMFTAKNAFDVLLWKKHEGDGKVLQ--PWQSMISGFLAGTAGPVCTGPFDVVKTRLMAQSRGGGELKYKGMVHAIRTIYAEEGLLALWKGLLPRLMRI 756
            TP +V+K  LQ     +  ++     I     + R+ G+  L+ G  PT++    + A  F+       L  K+++    + +  P   M S  +AG A  +CT P  ++KTR + Q   G + KY+G+VH++ +IY EEG   L+KGL P L+ +
Sbjct:   55 TPLDVIKTTLQVDNSSNKTIMSTVKSI-----LDRKGGVKNLYLGLKPTLVGQIPSWAVYFSTYTFCKELFTKENDKHSLLEKESPLIFMTSAIIAGAATSICTSPIWLIKTRFITQEMVGRQKKYRGIVHSMVSIYHEEGFRGLYKGLGPSLLGV 205          
BLAST of CN185546 vs. ExPASy Swiss-Prot
Match: AGC1_ASHGO (Mitochondrial aspartate-glutamate transporter AGC1 OS=Ashbya gossypii GN=AGC1 PE=3 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.359e-12
Identity = 55/158 (34.81%), Postives = 79/158 (50.00%), Query Frame = -2
Query:  289 PFEVVKIRLQQQRGLSLELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRNGTNQAAMFT--AKNAFDVLLWKKHEGDGK-VLQPWQSMISGFLAGTAGPVCTGPFDVVKTRLMAQSRGGGELKYKGMVHAIRTIYAEEGLLALWKGLLPRLMRIPP 753
            P E+VKIRLQ +     +  +       A  +I+  GL GL+ GA   ++R+    A  F   A    +V  +   + D +  L  WQ ++SG LAG      T PFDV+KTRL    +  GE  Y G+  A RTI  EEG+ + +KG   R++R  P
Sbjct:  637 PLEIVKIRLQVKSDYVADAARNSVN---AISVIKNLGLIGLYRGAGACLLRDIPFSAIYFPTYAHIKSNVFNFDPKDSDKRNKLNTWQLLVSGGLAGMPAAFLTTPFDVIKTRLQIDPK-KGESVYNGIWDAARTILKEEGIKSFFKGGPARVLRSSP 790          
BLAST of CN185546 vs. ExPASy Swiss-Prot
Match: UCP3_HUMAN (Mitochondrial uncoupling protein 3 OS=Homo sapiens GN=UCP3 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.776e-12
Identity = 59/184 (32.07%), Postives = 84/184 (45.65%), Query Frame = -2
Query:  214 PFEVVKIRLQQQ--RGLSLELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRNG-TNQAAMFTAKNAFDVLLWKKHEGDGKVLQPWQSMISGFLAGTAGPVCTGPFDVVKTRLMAQSRGGGELKYKGMVHAIRTIYAEEGLLALWKGLLPRLMRIPPGQAIMWAVADQV-TGFYERRYLRNAP 753
            P +VVK+R Q     G S    KY G +   R I REEG+ GLW G  P +MRN   N A + T    +D+L  K  +            +S F AG    V   P DVVKTR M    G    +Y   +  +  + A+EG  A +KG  P  +R+     +M+   +Q+     + + LR +P
Sbjct:  136 PTDVVKVRFQASIHLGPSRSDRKYSGTMDAYRTIAREEGVRGLWKGTLPNIMRNAIVNCAEVVT----YDILKEKLLDYHLLTDNFPCHFVSAFGAGFCATVVASPVDVVKTRYMNSPPG----QYFSPLDCMIKMVAQEGPTAFYKGFTPSFLRLGSWNVVMFVTYEQLKRALMKVQMLRESP 311          
BLAST of CN185546 vs. ExPASy Swiss-Prot
Match: UCP2_BOVIN (Mitochondrial uncoupling protein 2 OS=Bos taurus GN=UCP2 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.776e-12
Identity = 58/182 (31.87%), Postives = 78/182 (42.86%), Query Frame = -2
Query:  214 PFEVVKIRLQQQRGLSLELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRNG-TNQAAMFTAKNAFDVLLWKKHEGDGKVLQPWQSMISGFLAGTAGPVCTGPFDVVKTRLMAQSRGGGELKYKGMVHAIRTIYAEEGLLALWKGLLPRLMRIPPGQAIMWAVADQV-TGFYERRYLRNAP 753
            P +VVK+R Q Q        +Y+  +   + I REEG  GLW G +P V RN   N A + T     D LL      D           S F AG    V   P DVVKTR M  + G    +Y    H   T+  +EG  A +KG +P  +R+     +M+   +Q+       R  R AP
Sbjct:  136 PTDVVKVRFQAQARAGAGR-RYQSTVEAYKTIAREEGFRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKAHLMTDDLPCH----FTSAFGAGFCTTVIASPVDVVKTRYMNSALG----QYSSAGHCALTMLQKEGPQAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMAARASREAP 308          
BLAST of CN185546 vs. ExPASy Swiss-Prot
Match: MCATL_BOVIN (Mitochondrial carnitine/acylcarnitine carrier protein CACL OS=Bos taurus GN=SLC25A29 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.776e-12
Identity = 54/170 (31.76%), Postives = 79/170 (46.47%), Query Frame = -2
Query:  244 PFEVVKIRLQQQRGLSLELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRNGTNQAAMFTAKNAFDVLLWKKHEGDGKVLQPWQSMISGFLAGTAGPVCTGPFDVVKTRLMAQSRGGGELKYKGMVHAIRTIYAEEGLLALWKGLLPRLMRIPPGQAIMWAVADQVTGF 753
            P E+ K RLQ Q         Y+GP+ C   I R+EGL G+  G   T++R   +    F     +DVL        G  L   + +++G  +G A  + T P DVVK+RL A    G   +Y+G+V  ++  Y EEG     +GL   L+R  P  A  +A    V  +
Sbjct:  112 PMELAKTRLQLQEAGPART--YRGPLDCLAQIYRQEGLRGVNRGMVSTLLRETPSFGVYFLT---YDVLTRALGCEPGDRLLVPKLLLAGGTSGIASWLSTYPVDVVKSRLQADGLQGAP-RYRGIVDCVQQSYREEGWRVFTRGLASTLLRAFPVNAATFATVTVVLSY 275          

HSP 2 Score: 71.2478 bits (173), Expect = 6.747e-12
Identity = 48/168 (28.57%), Postives = 80/168 (47.62%), Query Frame = -2
Query:  250 PFEVVKIRLQQQRGLSLELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRNGTNQAAMFTAKNAFDVLLWKKHEGDGKVLQPWQSMISGFLAGTAGPVCTGPFDVVKTRLMAQSRGGGELKYKGMVHAIRTIYAEEGLLALWKGLLPRLMRIPPGQAIMWAVADQVT 753
            PF+ VK+RLQ Q   S+E  +Y+G +HC + II++E + GL+ G    ++      A +F  +      L +          P    ++G  AG    V   P ++ KTRL  Q  G     Y+G +  +  IY +EGL  + +G++  L+R  P   + +   D +T
Sbjct:   21 PFDTVKVRLQVQ---SVEKPQYRGTLHCFQAIIKQESVLGLYRGLGSPLLGLTFINALVFGVQGNTLRALGRD--------SPLNQFLAGAAAGAIQCVICCPMELAKTRLQLQEAGPAR-TYRGPLDCLAQIYRQEGLRGVNRGMVSTLLRETPSFGVYFLTYDVLT 176          
BLAST of CN185546 vs. ExPASy Swiss-Prot
Match: S2543_HUMAN (Solute carrier family 25 member 43 OS=Homo sapiens GN=SLC25A43 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.319e-12
Identity = 45/124 (36.29%), Postives = 64/124 (51.61%), Query Frame = -2
Query:  316 KGPIHCARMIIREEGLFGLWAGAAPTVMRNGTNQAAMFTAKNAFDVLLWKKHEGDGKVLQPWQSMISGFLAGTAGPVCTGPFDVVKTRLMAQSRGGGELKYKGMVHAIRTIYAEEGLLALWKGL 687
            +GP      + R EGL  LW G A   +R     A    A   F VL       D   +  W S+++G LAG    + T P D++KTRL+ Q+    E  Y+G++HA  TIY +EG LAL++G+
Sbjct:   50 RGPWATGHRVWRAEGLRALWKGNAVACLRLFPCSAVQLAAYRKFVVLF----TDDLGHISQWSSIMAGSLAGMVSTIVTYPTDLIKTRLIMQNIL--EPSYRGLLHAFSTIYQQEGFLALYRGV 167          
The following BLAST results are available for this feature:
BLAST of CN185546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
UCP1_CANFA1.041e-1231.55Mitochondrial brown fat uncoupling protein 1 OS=Ca... [more]
TXTP_YEAST1.041e-1229.31Tricarboxylate transport protein OS=Saccharomyces ... [more]
MFTC_HUMAN1.041e-1234.64Mitochondrial folate transporter/carrier OS=Homo s... [more]
UCP1_HUMAN1.359e-1231.58Mitochondrial brown fat uncoupling protein 1 OS=Ho... [more]
MCFW_DICDI1.359e-1230.13Mitochondrial substrate carrier family protein W O... [more]
AGC1_ASHGO1.359e-1234.81Mitochondrial aspartate-glutamate transporter AGC1... [more]
UCP3_HUMAN1.776e-1232.07Mitochondrial uncoupling protein 3 OS=Homo sapiens... [more]
UCP2_BOVIN1.776e-1231.87Mitochondrial uncoupling protein 2 OS=Bos taurus G... [more]
MCATL_BOVIN1.776e-1231.76Mitochondrial carnitine/acylcarnitine carrier prot... [more]
S2543_HUMAN2.319e-1236.29Solute carrier family 25 member 43 OS=Homo sapiens... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001I04_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001I04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185546 ID=CN185546; Name=CN185546; organism=Citrus sinensis; type=EST; length=760bp
TTTTTTTTTTTTTTGAGAAAATCTGGCAACTACCTACATTTTCCCCTTCC
TAGGCATGGCAAATTACTGATTCGGTCTACAAAAACTGGTGTTCAATCAA
AGAATCCTTAAGAACTCAAAAAGAAATGCTGAAGCAATTCATAGCTTCAT
GCTAGCAATGGAAGTATGTAACTAAAATGTAGAATAGGCAAAACAATAAA
ATAGTACCTATAAGGGTGCATTGCGAAGATATCTCCTCTCATAAAAACCA
GTCACTTGGTCAGCCACAGCCCACATAATGGCCTGGCCTGGCGGGATCCT
CATGAGACGGGGCAGCAGTCCTTTCCACAAGGCAAGAAGCCCCTCCTCAG
CATATATTGTTCTGATTGCATGGACCATGCCTTTGTACTTTAACTCACCC
CCACCTCGACTCTGGGCCATCAGCCTTGTCTTGACAACATCAAAAGGGCC
AGTGCATACTGGACCTGCTGTTCCTGCAAGGAATCCCGATATCATGGACT
GCCACGGTTGGAGGACCTTCCCATCACCTTCATGTTTCTTCCACAAGAGT
ACATCAAAAGCATTTTTAGCCGTAAACATGGCAGCTTGGTTTGTCCCATT
GCGCATAACAGTTGGGGCAGCCCCTGCCCAGAGTCCAAAGAGTCCTTCCT
CACGGATGATCATACGAGCACAGTGTATAGGACCCTTGTACTTTAGAAGC
TCAAGACTCAAACCTCTCTGCTGTTGTAGTCTAATTTTCACCACCTCAAA
AGGAGTAACA
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