CN185546

Overview
NameCN185546
Unique NameCN185546
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length760
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10630 contig Csv1_Contig10630:554..1313. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185546 vs. ExPASy Swiss-Prot
Match: CMC_DICDI (Calcium-binding mitochondrial carrier protein OS=Dictyostelium discoideum GN=mcfO PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.319e-12
Identity = 56/155 (36.13%), Postives = 75/155 (48.39%), Query Frame = -2
Query:  289 PFEVVKIRLQQQRGLSLELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRNGTNQAAMFTAKNAFDVLLWKKHEGDGKVLQPWQSMISGFLAGTAGPVCTGPFDVVKTRLMAQSRGGGELKYKGMVHAIRTIYAEEGLLALWKGLLPRLMRIPP 753
            P E+VKIRLQ Q           GP   A  II+E GL GL+ GA   ++R+    A  F        +L  +   DGK L P   +++G +AG        P DV+KTRL  ++  G E  Y G+    + I  EEG  AL+KG L R+ R  P
Sbjct:  557 PLEIVKIRLQVQS---------TGPKVSAITIIKELGLAGLYKGAGACLLRDIPFSAIYFPTYAKMKTILANE---DGK-LGPMDLLLAGAVAGIPAASLVTPADVIKTRLQVKANAG-EQTYTGIRDCFQKILKEEGPRALFKGALARVFRSSP 697          
BLAST of CN185546 vs. ExPASy Swiss-Prot
Match: UCP2_PONAB (Mitochondrial uncoupling protein 2 OS=Pongo abelii GN=UCP2 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.029e-12
Identity = 54/168 (32.14%), Postives = 75/168 (44.64%), Query Frame = -2
Query:  253 PFEVVKIRLQQQRGLSLELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRNG-TNQAAMFTAKNAFDVLLWKKHEGDGKVLQPWQSMISGFLAGTAGPVCTGPFDVVKTRLMAQSRGGGELKYKGMVHAIRTIYAEEGLLALWKGLLPRLMRIPPGQAIMWAVADQV 753
            P +VVK+R Q Q        +Y+  ++  + I REEG  GLW G +P V RN   N A + T     D LL      D           S F AG    V   P DVVKTR M  + G    +Y    H   T+  +EG  A +KG +P  +R+     +M+   +Q+
Sbjct:  136 PTDVVKVRFQAQARAGGGR-RYQSTVNAYKTIAREEGFRGLWKGTSPNVARNAIVNCAELVTYDLIKDALLKANLMTDDLPCH----FTSAFGAGFCTTVIASPVDVVKTRYMNSALG----QYSSAGHCALTMLQKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQL 294          
BLAST of CN185546 vs. ExPASy Swiss-Prot
Match: UCP2_PIG (Mitochondrial uncoupling protein 2 OS=Sus scrofa GN=UCP2 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.029e-12
Identity = 59/182 (32.42%), Postives = 78/182 (42.86%), Query Frame = -2
Query:  214 PFEVVKIRLQQQRGLSLELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRNG-TNQAAMFTAKNAFDVLLWKKHEGDGKVLQPWQSMISGFLAGTAGPVCTGPFDVVKTRLMAQSRGGGELKYKGMVHAIRTIYAEEGLLALWKGLLPRLMRIPPGQAIMWAVADQV-TGFYERRYLRNAP 753
            P +VVK+R Q Q        +Y+  +   + I REEGL GLW G +P V RN   N A + T     D LL      D           S F AG    V   P DVVKTR M  + G    +Y    H   T+  +EG  A +KG  P  +R+     +M+   +Q+       R  R AP
Sbjct:  136 PTDVVKVRFQAQARAGGGR-RYRSTVDAYKTIAREEGLRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKADLMTDDLPCH----FTSAFGAGFCTTVIASPVDVVKTRYMNSAPG----QYSSAGHCALTMLQKEGPRAFYKGFTPSFLRLGSWNVVMFVTYEQLKRALMAARASREAP 308          
BLAST of CN185546 vs. ExPASy Swiss-Prot
Match: UCP2_MOUSE (Mitochondrial uncoupling protein 2 OS=Mus musculus GN=Ucp2 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.029e-12
Identity = 54/168 (32.14%), Postives = 75/168 (44.64%), Query Frame = -2
Query:  253 PFEVVKIRLQQQRGLSLELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRNG-TNQAAMFTAKNAFDVLLWKKHEGDGKVLQPWQSMISGFLAGTAGPVCTGPFDVVKTRLMAQSRGGGELKYKGMVHAIRTIYAEEGLLALWKGLLPRLMRIPPGQAIMWAVADQV 753
            P +VVK+R Q Q        +Y+  +   + I REEG+ GLW G +P V RN   N A + T     D LL      D           S F AG    V   P DVVKTR M  + G    +Y    H   T+  +EG  A +KG +P  +R+     +M+   +Q+
Sbjct:  136 PTDVVKVRFQAQARAGGGR-RYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANLMTDDLPCH----FTSAFGAGFCTTVIASPVDVVKTRYMNSALG----QYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQL 294          
BLAST of CN185546 vs. ExPASy Swiss-Prot
Match: UCP2_HUMAN (Mitochondrial uncoupling protein 2 OS=Homo sapiens GN=UCP2 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.029e-12
Identity = 54/168 (32.14%), Postives = 75/168 (44.64%), Query Frame = -2
Query:  253 PFEVVKIRLQQQRGLSLELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRNG-TNQAAMFTAKNAFDVLLWKKHEGDGKVLQPWQSMISGFLAGTAGPVCTGPFDVVKTRLMAQSRGGGELKYKGMVHAIRTIYAEEGLLALWKGLLPRLMRIPPGQAIMWAVADQV 753
            P +VVK+R Q Q        +Y+  ++  + I REEG  GLW G +P V RN   N A + T     D LL      D           S F AG    V   P DVVKTR M  + G    +Y    H   T+  +EG  A +KG +P  +R+     +M+   +Q+
Sbjct:  136 PTDVVKVRFQAQARAGGGR-RYQSTVNAYKTIAREEGFRGLWKGTSPNVARNAIVNCAELVTYDLIKDALLKANLMTDDLPCH----FTSAFGAGFCTTVIASPVDVVKTRYMNSALG----QYSSAGHCALTMLQKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQL 294          
BLAST of CN185546 vs. ExPASy Swiss-Prot
Match: UCP2_CANFA (Mitochondrial uncoupling protein 2 OS=Canis familiaris GN=UCP2 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.029e-12
Identity = 54/168 (32.14%), Postives = 74/168 (44.05%), Query Frame = -2
Query:  253 PFEVVKIRLQQQRGLSLELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRNG-TNQAAMFTAKNAFDVLLWKKHEGDGKVLQPWQSMISGFLAGTAGPVCTGPFDVVKTRLMAQSRGGGELKYKGMVHAIRTIYAEEGLLALWKGLLPRLMRIPPGQAIMWAVADQV 753
            P +VVK+R Q Q        +Y+  +   + I REEG  GLW G +P V RN   N A + T     D LL      D           S F AG    V   P DVVKTR M  + G    +Y    H   T+  +EG  A +KG +P  +R+     +M+   +Q+
Sbjct:  136 PTDVVKVRFQAQARAGSGR-RYQSTVDAYKTIAREEGFRGLWKGTSPNVARNAIVNCAELVTYDLIKDALLKANLMTDDLPCH----FTSAFGAGFCTTVIASPVDVVKTRYMNSALG----QYSSAGHCALTMLQKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQL 294          
BLAST of CN185546 vs. ExPASy Swiss-Prot
Match: MCFS_DICDI (Mitochondrial substrate carrier family protein S OS=Dictyostelium discoideum GN=mcfS PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.029e-12
Identity = 57/173 (32.95%), Postives = 85/173 (49.13%), Query Frame = -2
Query:  253 VTPFEVVKIRLQQQRGLSLELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRNGTNQAAMF----TAKNAFDVLLWKKHEGDGKVLQPWQSMISGFLAGTAGPVCTGPFDVVKTRLMAQSRGGGELKYKGMVHAIRTIYAEEGLLALWKGLLPRLMRIPPGQAIMWAVADQV 759
            +TP E+VK RLQ Q   +    KYKG + C   I++E G+ G + G  PT+ R      A F    T K  F     K ++ D   L     +ISG L G A      P DV K+++   S G G      +V  ++ IY++EG+  L++G  P ++R  P  A M++V + V
Sbjct:  116 LTPVELVKCRLQVQ---TTGPQKYKGSLDCLVQILKEGGIRGAYRGFTPTIAREFVGNMAFFSTYETCKRYFKNKENKPNDDDELNLP--ALIISGGLGGMAYWTVLYPVDVAKSKIQI-SEGAG--PSPSIVKVLKEIYSKEGVKGLFRGYTPTIIRSFPANAAMFSVYELV 280          
BLAST of CN185546 vs. ExPASy Swiss-Prot
Match: MCATL_MOUSE (Mitochondrial carnitine/acylcarnitine carrier protein CACL OS=Mus musculus GN=Slc25a29 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.029e-12
Identity = 50/168 (29.76%), Postives = 80/168 (47.62%), Query Frame = -2
Query:  250 PFEVVKIRLQQQRGLSLELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRNGTNQAAMFTAKNAFDVLLWKKHEGDGKVLQPWQSMISGFLAGTAGPVCTGPFDVVKTRLMAQSRGGGELKYKGMVHAIRTIYAEEGLLALWKGLLPRLMRIPPGQAIMWAVADQVT 753
            PF++VK+RLQ Q   S E  +Y+G +HC + II++E + GL+ G    +M      A +F  +      L +          P    ++G  AG    V   P ++ KTRL  Q+ G     YKG +  +  IY  EGL  + +G++  L+R  P   + +   D +T
Sbjct:   21 PFDIVKVRLQVQ---STEKPQYRGTLHCFQSIIKQESVLGLYKGLGSPLMGLTFINALVFGVQGNTLRALGQD--------SPLNQFLAGAAAGAIQCVICCPMELAKTRLQLQAVGPAR-TYKGSLDCLVQIYRHEGLRGINRGMVSTLLRETPSFGVYFLTYDVMT 176          
BLAST of CN185546 vs. ExPASy Swiss-Prot
Match: M2OM_BOVIN (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Bos taurus GN=SLC25A11 PE=1 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 3.029e-12
Identity = 52/179 (29.05%), Postives = 82/179 (45.81%), Query Frame = -2
Query:  226 TPFEVVKIRLQQQRGLSLELLK-YKGPIHCARMIIREEGLFGLWAGAAPTVMRNGT-NQAAMFTAKNAFDVLLWKKHEGDGKVLQPWQSMISGFLAGTAGPVCTGPFDVVKTRLMAQSRGGGELKYKGMVHAIRTIYAEEGLLALWKGLLPRLMRIPPGQAIMWAVADQVTGFYERRYL 756
            TP EV  IR+     L ++  + YK   +    I++EEG+  LW G  PT+ R    N A + +   +   LL   +  D  +     SMISG +   A      P D+VKTR+       G+ +YK  +  +  +   EG  +LWKG  P   R+ P   + +   +Q+   Y+R +L
Sbjct:  138 TPAEVALIRMTADGRLPVDQRRGYKNVFNALFRIVQEEGVPTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASM----PVDIVKTRIQNMRMIDGKPEYKNGLDVLVKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNKAYKRLFL 312          
BLAST of CN185546 vs. ExPASy Swiss-Prot
Match: CMC2_MOUSE (Calcium-binding mitochondrial carrier protein Aralar2 OS=Mus musculus GN=Slc25a13 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.029e-12
Identity = 51/155 (32.90%), Postives = 73/155 (47.10%), Query Frame = -2
Query:  289 PFEVVKIRLQQQRGLSLELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRNGTNQAAMFTAKNAFDVLLWKKHEGDGKVLQPWQSMISGFLAGTAGPVCTGPFDVVKTRLMAQSRGGGELKYKGMVHAIRTIYAEEGLLALWKGLLPRLMRIPP 753
            P E+VKIRLQ    ++       GP   A  ++R+ G FG++ GA    +R+    A  F            +   DG+V  P   +++G +AG        P DV+KTRL   +R G +  Y G+    R I  EEG  ALWKG+  R+ R  P
Sbjct:  449 PLEIVKIRLQVAGEITT------GPRVSALSVVRDLGFFGIYKGAKACFLRDIPFSAIYFPCYAHVKASFANE---DGQV-SPGSLLLAGAIAGMPAASLVTPADVIKTRLQVAARAG-QTTYNGVTDCFRKILREEGPKALWKGVAARVFRSSP 592          
The following BLAST results are available for this feature:
BLAST of CN185546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
CMC_DICDI2.319e-1236.13Calcium-binding mitochondrial carrier protein OS=D... [more]
UCP2_PONAB3.029e-1232.14Mitochondrial uncoupling protein 2 OS=Pongo abelii... [more]
UCP2_PIG3.029e-1232.42Mitochondrial uncoupling protein 2 OS=Sus scrofa G... [more]
UCP2_MOUSE3.029e-1232.14Mitochondrial uncoupling protein 2 OS=Mus musculus... [more]
UCP2_HUMAN3.029e-1232.14Mitochondrial uncoupling protein 2 OS=Homo sapiens... [more]
UCP2_CANFA3.029e-1232.14Mitochondrial uncoupling protein 2 OS=Canis famili... [more]
MCFS_DICDI3.029e-1232.95Mitochondrial substrate carrier family protein S O... [more]
MCATL_MOUSE3.029e-1229.76Mitochondrial carnitine/acylcarnitine carrier prot... [more]
M2OM_BOVIN3.029e-1229.05Mitochondrial 2-oxoglutarate/malate carrier protei... [more]
CMC2_MOUSE3.029e-1232.90Calcium-binding mitochondrial carrier protein Aral... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001I04_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001I04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185546 ID=CN185546; Name=CN185546; organism=Citrus sinensis; type=EST; length=760bp
TTTTTTTTTTTTTTGAGAAAATCTGGCAACTACCTACATTTTCCCCTTCC
TAGGCATGGCAAATTACTGATTCGGTCTACAAAAACTGGTGTTCAATCAA
AGAATCCTTAAGAACTCAAAAAGAAATGCTGAAGCAATTCATAGCTTCAT
GCTAGCAATGGAAGTATGTAACTAAAATGTAGAATAGGCAAAACAATAAA
ATAGTACCTATAAGGGTGCATTGCGAAGATATCTCCTCTCATAAAAACCA
GTCACTTGGTCAGCCACAGCCCACATAATGGCCTGGCCTGGCGGGATCCT
CATGAGACGGGGCAGCAGTCCTTTCCACAAGGCAAGAAGCCCCTCCTCAG
CATATATTGTTCTGATTGCATGGACCATGCCTTTGTACTTTAACTCACCC
CCACCTCGACTCTGGGCCATCAGCCTTGTCTTGACAACATCAAAAGGGCC
AGTGCATACTGGACCTGCTGTTCCTGCAAGGAATCCCGATATCATGGACT
GCCACGGTTGGAGGACCTTCCCATCACCTTCATGTTTCTTCCACAAGAGT
ACATCAAAAGCATTTTTAGCCGTAAACATGGCAGCTTGGTTTGTCCCATT
GCGCATAACAGTTGGGGCAGCCCCTGCCCAGAGTCCAAAGAGTCCTTCCT
CACGGATGATCATACGAGCACAGTGTATAGGACCCTTGTACTTTAGAAGC
TCAAGACTCAAACCTCTCTGCTGTTGTAGTCTAATTTTCACCACCTCAAA
AGGAGTAACA
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