CN185539

Overview
NameCN185539
Unique NameCN185539
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length670
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185539 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSJ (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. japonica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.253e-21
Identity = 51/139 (36.69%), Postives = 80/139 (57.55%), Query Frame = 1
Query:   19 MAKSLKLEENCFLNQFGNQS---QYQARFNYYAHCQRPDLVLGLKPHSDGTGYTIVLQDEE--GLQVLKDEQWFTVPKISEAVLVLMGDQMEIMTNGIFKSPVHRVVTSAEKERFSVVVFYAPELNKEIGPENGLINEE 420
            + ++L LE+      F   +    +  + + Y  C RPDLV GL+ H+D  G  ++ QD+   GLQ+LKD +W  VP +  +++V +GDQ+E++TNG +KS +HRVV   +  R S+  FY P  +  I P   L+ EE
Sbjct:  137 LCENLGLEKGYLTKAFRGPAGAPTFGTKVSSYPPCPRPDLVEGLRAHTDAGGIILLFQDDRVGGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITNGRYKSVIHRVVAQTDGNRMSIASFYNPGSDAVISPAPALVKEE 275          
BLAST of CN185539 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSI (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. indica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.078e-20
Identity = 51/139 (36.69%), Postives = 80/139 (57.55%), Query Frame = 1
Query:   19 MAKSLKLEENCFLNQFGNQS---QYQARFNYYAHCQRPDLVLGLKPHSDGTGYTIVLQDEE--GLQVLKDEQWFTVPKISEAVLVLMGDQMEIMTNGIFKSPVHRVVTSAEKERFSVVVFYAPELNKEIGPENGLINEE 420
            + ++L LE+      F   +    +  + + Y  C RPDLV GL+ H+D  G  ++ QD+   GLQ+LKD +W  VP +  +++V +GDQ+E++TNG +KS +HRVV   +  R S+  FY P  +  I P   L+ EE
Sbjct:  137 LCENLGLEKGYLTKAFRGPAGAPTFGTKVSSYPPCPRPDLVKGLRAHTDAGGIILLFQDDSVGGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITNGRYKSVMHRVVAQTDGNRMSIASFYNPGSDAVISPAPALVKEE 275          
BLAST of CN185539 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.408e-20
Identity = 53/159 (33.33%), Postives = 89/159 (55.97%), Query Frame = 1
Query:   19 MAKSLKLEENCFLNQFGNQS--QYQARFNYYAHCQRPDLVLGLKPHSDGTGYTIVLQDEE--GLQVLKDEQWFTVPKISEAVLVLMGDQMEIMTNGIFKSPVHRVVTSAEKERFSVVVFYAPELNKEIGPENGLINEECPRLFKNMKDYANIHWEYYQK 483
            + ++L LE+    N F       +  + + Y  C +PDL+ GL+ H+D  G  ++ QD++  GLQ+LKD QW  VP +  +++V +GDQ+E++TNG +KS +HRV+   +  R S+  FY P  +  I P   L+ +E     +N + Y    ++ Y K
Sbjct:  132 LCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAE---ENKQVYPKFVFDDYMK 287          
BLAST of CN185539 vs. ExPASy Swiss-Prot
Match: ACCO1_BRAJU (1-aminocyclopropane-1-carboxylate oxidase OS=Brassica juncea GN=ACO PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.401e-20
Identity = 44/115 (38.26%), Postives = 74/115 (64.35%), Query Frame = 1
Query:   82 YQARFNYYAHCQRPDLVLGLKPHSDGTGYTIVLQDEE--GLQVLKDEQWFTVPKISEAVLVLMGDQMEIMTNGIFKSPVHRVVTSAEKERFSVVVFYAPELNKEIGPENGLINEE 420
            +  + + Y  C +P+++ GL+ H+D  G  ++ QD++  GLQ+LKD  W  VP ++ ++++ +GDQ+E++TNG +KS +HRVVT  E  R S+  FY P  + EI P + L  +E
Sbjct:  158 FGTKVSNYPACPKPEMIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGDWIDVPPLNHSIVINLGDQLEVITNGRYKSMMHRVVTQKEGNRMSIASFYNPGSDAEISPASSLACKE 272          
BLAST of CN185539 vs. ExPASy Swiss-Prot
Match: ACCO_DIACA (Probable 1-aminocyclopropane-1-carboxylate oxidase OS=Dianthus caryophyllus GN=ACO PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.136e-20
Identity = 54/157 (34.39%), Postives = 89/157 (56.69%), Query Frame = 1
Query:   19 MAKSLKLEENCFLNQF--GNQSQYQARFNYYAHCQRPDLVLGLKPHSDGTGYTIVLQDEE--GLQVLKDEQWFTVPKISEAVLVLMGDQMEIMTNGIFKSPVHRVVTSAEKERFSVVVFYAPELNKEIGPENGLI--NEECPRLFKN--MKDYANIH 465
            + ++L LE+    N F   N   +  + + Y  C +PDL+ GL+ H+D  G  ++ QD++  GLQ+LKD  W  VP +  +++V +GDQ+E++TNG +KS +HRV+   +  R S+  FY P  +  I P   L+   EE  R +     +DY N++
Sbjct:  138 LCENLGLEKAYLKNAFYGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGHWVDVPPMKHSIVVNLGDQLEVITNGKYKSVMHRVIAQTDGNRMSIASFYNPGSDAVIYPAPTLVEKEEEKCRAYPKFVFEDYMNLY 294          
BLAST of CN185539 vs. ExPASy Swiss-Prot
Match: ACCO_DENCR (1-aminocyclopropane-1-carboxylate oxidase OS=Dendrobium crumenatum GN=ACO PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.096e-20
Identity = 49/136 (36.03%), Postives = 78/136 (57.35%), Query Frame = 1
Query:   82 YQARFNYYAHCQRPDLVLGLKPHSDGTGYTIVLQDE--EGLQVLKDEQWFTVPKISEAVLVLMGDQMEIMTNGIFKSPVHRVVTSAEKERFSVVVFYAPELNKEIGPENGLINEECPRLFKNMKDYANIHWEYYQK 483
            +  + + Y  C +P+L+ GL+ H+D  G  ++ QD+   GLQ+LKDE+W  VP +  +++V +GDQ+E++TNG +KS +HRVV      R S+  FY P  +  I P   L+ +E     K  + Y    +E Y K
Sbjct:  153 FGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDTVSGLQLLKDEEWIDVPPMRHSIVVNIGDQLEVITNGKYKSVMHRVVAQTNGNRMSIASFYNPGSDAVIFPAPELVEKEAAE--KKKETYPKFVFEDYMK 286          
BLAST of CN185539 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.096e-20
Identity = 54/165 (32.73%), Postives = 92/165 (55.76%), Query Frame = 1
Query:   19 MAKSLKLEENCFLNQFGNQS--QYQARFNYYAHCQRPDLVLGLKPHSDGTGYTIVLQDEE--GLQVLKDEQWFTVPKISEAVLVLMGDQMEIMTNGIFKSPVHRVVTSAEKERFSVVVFYAPELNKEIGPENGLINEECPRLFKN----------MKDYANIHWE 471
            + ++L LE++   N F       +  + + Y  C +PDL+ GL+ H+D  G  ++ QD++  GLQ+LKD +W  VP +  +++V +GDQ+E++TNG +KS +HRV+   +  R S+  FY P  +  I P   L+++E     K           MK YAN+ ++
Sbjct:  132 LCENLGLEKSYLKNTFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGRWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGTRMSLASFYNPGNDALIYPAPALVDKEAEEHNKQVYPKFMFDDYMKLYANLKFQ 296          
BLAST of CN185539 vs. ExPASy Swiss-Prot
Match: FLS_MALDO (Flavonol synthase/flavanone 3-hydroxylase OS=Malus domestica GN=FLS PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.349e-20
Identity = 50/128 (39.06%), Postives = 74/128 (57.81%), Query Frame = 1
Query:   67 GNQSQYQARFNYYAHCQRPDLVLGLKPHSDGTGYTIVL-QDEEGLQVLKDEQWFTVPKISEAVLVLMGDQMEIMTNGIFKSPVHRVVTSAEKERFSVVVFYAPELNKEIGPENGLINEECPRLFKNMK 447
            G+  +Y  + NYY  C RPDL LG+  H+D +  TI++  D +GLQ  KD +W+ V  I  A+++ +GDQMEIM+NG + S +HR   + +K R S  VF  P  +  +GP   L+N      +K  K
Sbjct:  196 GDNLEYLLKINYYPPCPRPDLALGVVAHTDMSTVTILVPNDVQGLQACKDGRWYDVKYIPNALVIHIGDQMEIMSNGKYTSVLHRTTVNKDKTRISWPVFLEPPADHVVGPHPQLVNAVNQPKYKTKK 323          
BLAST of CN185539 vs. ExPASy Swiss-Prot
Match: ACCO2_DORSP (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Doritaenopsis sp. GN=ACO2 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.987e-20
Identity = 48/137 (35.04%), Postives = 79/137 (57.66%), Query Frame = 1
Query:   82 YQARFNYYAHCQRPDLVLGLKPHSDGTGYTIVLQDEE--GLQVLKDEQWFTVPKISEAVLVLMGDQMEIMTNGIFKSPVHRVVTSAEKERFSVVVFYAPELNKEIGPENGLINEECPRLFKN-------MKDYANIH 465
            +  + + Y  C +PDL+ GL+ H+D  G  ++ QD++  GLQ+LKD +W  VP +  +++V +GDQ+E++TNG +KS +HRVV   +  R S+  FY P  +  I P   L+ +E     K         +DY N++
Sbjct:  159 FGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDREWIEVPPLRYSIVVNIGDQLEVITNGKYKSVLHRVVAQTDGNRMSIASFYNPGSDAVIFPAPALVEKEAEEEEKKEIYPKFVFQDYMNLY 295          
BLAST of CN185539 vs. ExPASy Swiss-Prot
Match: ACCO_PEA (1-aminocyclopropane-1-carboxylate oxidase OS=Pisum sativum GN=ACO PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.192e-19
Identity = 46/137 (33.58%), Postives = 81/137 (59.12%), Query Frame = 1
Query:   19 MAKSLKLEENCFLNQFGNQS--QYQARFNYYAHCQRPDLVLGLKPHSDGTGYTIVLQDEE--GLQVLKDEQWFTVPKISEAVLVLMGDQMEIMTNGIFKSPVHRVVTSAEKERFSVVVFYAPELNKEIGPENGLINE 417
            + ++L LE+      F       +  + + Y  C +P+L+ GL+ H+D  G  ++ QD++  GLQ+LKD+QW  VP +  ++++ +GDQ+E++TNG +KS +HRV+   +  R S+  FY P  +  I P + L+ E
Sbjct:  132 LCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEVITNGKYKSVMHRVIAQTDGARMSIASFYNPGDDAVISPASTLLKE 268          
The following BLAST results are available for this feature:
BLAST of CN185539 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
ACCO1_ORYSJ8.253e-2136.691-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCO1_ORYSI1.078e-2036.691-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCO1_PETHY1.408e-2033.331-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
ACCO1_BRAJU2.401e-2038.261-aminocyclopropane-1-carboxylate oxidase OS=Brass... [more]
ACCO_DIACA3.136e-2034.39Probable 1-aminocyclopropane-1-carboxylate oxidase... [more]
ACCO_DENCR4.096e-2036.031-aminocyclopropane-1-carboxylate oxidase OS=Dendr... [more]
ACCO2_SOLLC4.096e-2032.731-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
FLS_MALDO5.349e-2039.06Flavonol synthase/flavanone 3-hydroxylase OS=Malus... [more]
ACCO2_DORSP6.987e-2035.041-aminocyclopropane-1-carboxylate oxidase 2 OS=Dor... [more]
ACCO_PEA1.192e-1933.581-aminocyclopropane-1-carboxylate oxidase OS=Pisum... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001H24_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001H24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185539 ID=CN185539; Name=CN185539; organism=Citrus sinensis; type=EST; length=670bp
ATGATCACTTCCAAAGCCATGGCAAAGTCATTGAAGTTAGAGGAAAATTG
CTTCCTGAATCAGTTTGGGAATCAATCACAGTATCAAGCGAGGTTTAACT
ATTATGCACATTGTCAGAGACCTGATCTTGTCCTGGGCTTAAAACCCCAT
TCAGATGGAACCGGATACACCATTGTATTGCAGGACGAAGAAGGTCTCCA
AGTCCTCAAAGATGAGCAATGGTTTACAGTACCCAAAATATCTGAAGCTG
TCCTAGTCCTCATGGGTGACCAAATGGAGATAATGACTAATGGAATCTTC
AAGAGCCCAGTGCATAGAGTAGTTACTAGTGCAGAAAAGGAGAGGTTTTC
TGTAGTAGTATTTTATGCACCAGAATTGAACAAGGAGATTGGACCAGAAA
ATGGCTTAATCAACGAGGAATGCCCAAGATTATTCAAGAACATGAAAGAT
TACGCCAATATTCACTGGGAATACTACCAGAAAGGACAGCGAGCACTTCA
CACCGCAAAAGGGTGATATTGTCCTGTAGCATACTGATAGAATAGTCTCA
TGTTCTGTCACTTCTTTATCCTTCCATCTTTCTTTTCCTTCTTCGTTTTG
TGTGGTTGTGAAACTTAATCCTAGAGCTTTTAAATAAACACTACCTTATG
GGTGAAAAAAAAAAAAAAAA
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