CN185539

Overview
NameCN185539
Unique NameCN185539
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length670
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185539 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.192e-19
Identity = 50/159 (31.45%), Postives = 87/159 (54.72%), Query Frame = 1
Query:   19 MAKSLKLEENCFLNQFGNQS--QYQARFNYYAHCQRPDLVLGLKPHSDGTGYTIVLQDEE--GLQVLKDEQWFTVPKISEAVLVLMGDQMEIMTNGIFKSPVHRVVTSAEKERFSVVVFYAPELNKEIGPENGLINEECPRLFKNMKDYANIHWEYYQK 483
            + ++L LE+      F       +  + + Y  C +PDL+ GL+ H+D  G  ++ QD++  GLQ+LKD+QW  VP +  ++++ +GDQ+E++TNG +KS  HRV+   +  R S+  FY P  +  I P   L+  +     +N + Y    ++ Y K
Sbjct:  132 LCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEVITNGKYKSVPHRVIAQTDGTRMSLASFYNPASDAVIYPAPALVERDAE---ENKQIYPKFVFDDYMK 287          
BLAST of CN185539 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.192e-19
Identity = 53/165 (32.12%), Postives = 92/165 (55.76%), Query Frame = 1
Query:   19 MAKSLKLEENCFLNQFGNQS--QYQARFNYYAHCQRPDLVLGLKPHSDGTGYTIVLQDEE--GLQVLKDEQWFTVPKISEAVLVLMGDQMEIMTNGIFKSPVHRVVTSAEKERFSVVVFYAPELNKEIGPENGLI----NEECPRLFKN------MKDYANIHWE 471
            + ++L LE+      F       +  + + Y  C +PDL+ GL+ H+D  G  ++ QD++  GLQ+LKD QW  VP +  +++V +GDQ+E++TNG +KS +HRV+   +  R S+  FY P  +  I P   L+    ++EC +++        MK YA + ++
Sbjct:  132 LCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVLHRVIAQTDGTRMSLASFYNPGSDAVIYPAPTLVEKEADQECKQVYPKFVFDDYMKLYAGLKFQ 296          
BLAST of CN185539 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.556e-19
Identity = 45/115 (39.13%), Postives = 74/115 (64.35%), Query Frame = 1
Query:   82 YQARFNYYAHCQRPDLVLGLKPHSDGTGYTIVLQDEE--GLQVLKDEQWFTVPKISEAVLVLMGDQMEIMTNGIFKSPVHRVVTSAEKERFSVVVFYAPELNKEIGPENGLINEE 420
            + ++ + Y  C +PDL+ GL+ H+D  G  ++ QD++  GLQ+LKD QW  VP +  +++V +GDQ+E++TNG +KS +HRV+T  +  R S+  FY P  +  I P   L+ +E
Sbjct:  155 FGSKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGQWIDVPPMRLSIVVNLGDQLEVITNGKYKSVMHRVITQTDGTRMSLASFYNPGSDAVIFPAPTLVEKE 269          
BLAST of CN185539 vs. ExPASy Swiss-Prot
Match: ACCO1_ARATH (1-aminocyclopropane-1-carboxylate oxidase OS=Arabidopsis thaliana GN=ACO PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.033e-19
Identity = 54/160 (33.75%), Postives = 90/160 (56.25%), Query Frame = 1
Query:   19 MAKSLKLEENCFLNQF--GNQSQYQARFNYYAHCQRPDLVLGLKPHSDGTGYTIVLQDEE--GLQVLKDEQWFTVPKISEAVLVLMGDQMEIMTNGIFKSPVHRVVTSAEKE-RFSVVVFYAPELNKEIGPENGLINEECPRLFKNMKDYANIHWEYYQK 483
            + ++L LE+      F    +  +  + + Y  C  PDLV GL+ H+D  G  ++ QD++  GLQ+LKD +W  VP +  +++V +GDQ+E++TNG +KS  HRV++  + E R S+  FY P  +  I P   LI +E  +  +  ++Y    +E Y K
Sbjct:  132 LCENLGLEKGYLKKVFYGSKRPTFGTKVSNYPPCPNPDLVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVPPVKHSIVVNLGDQLEVITNGKYKSVEHRVLSQTDGEGRMSIASFYNPGSDSVIFPAPELIGKEAEK--EKKENYPRFVFEDYMK 289          
BLAST of CN185539 vs. ExPASy Swiss-Prot
Match: ACCO2_MALDO (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.655e-19
Identity = 46/138 (33.33%), Postives = 81/138 (58.70%), Query Frame = 1
Query:   19 MAKSLKLEENCFLNQFGNQS--QYQARFNYYAHCQRPDLVLGLKPHSDGTGYTIVLQDEE--GLQVLKDEQWFTVPKISEAVLVLMGDQMEIMTNGIFKSPVHRVVTSAEKERFSVVVFYAPELNKEIGPENGLINEE 420
            + ++L LE+      F       +  + + Y  C +PDL+ GL+ H+D  G  ++ QD++  GLQ+LKD +W  VP +  ++++ +GDQ+E++TNG +KS +HRV+  ++  R S+  FY P  +  I P   L+ E+
Sbjct:  132 LCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWMDVPPVHHSIVINLGDQIEVITNGKYKSIMHRVIAQSDGTRMSIASFYNPGDDAFISPAPALLEEK 269          
BLAST of CN185539 vs. ExPASy Swiss-Prot
Match: ACCO1_DORSP (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Doritaenopsis sp. GN=ACO1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.655e-19
Identity = 44/125 (35.20%), Postives = 75/125 (60.00%), Query Frame = 1
Query:   82 YQARFNYYAHCQRPDLVLGLKPHSDGTGYTIVLQDEE--GLQVLKDEQWFTVPKISEAVLVLMGDQMEIMTNGIFKSPVHRVVTSAEKERFSVVVFYAPELNKEIGPENGLINEECPRLFKNMKD 450
            +  + + Y  C +P+L+ GL+ H+D  G  ++ QD++  GLQ+LKD +W  VP +  +++V +GDQ+E++TNG +KS +HRVV   +  R S+  FY P  +  I P   L+ +E     +  K+
Sbjct:  159 FGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWIDVPPVRHSIVVNIGDQLEVITNGKYKSVLHRVVAQTDGNRMSIASFYNPGSDAVIFPAPALVEKEAEEKEEKKKE 283          
BLAST of CN185539 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.529e-19
Identity = 43/108 (39.81%), Postives = 69/108 (63.89%), Query Frame = 1
Query:  103 YAHCQRPDLVLGLKPHSDGTGYTIVLQDEE--GLQVLKDEQWFTVPKISEAVLVLMGDQMEIMTNGIFKSPVHRVVTSAEKERFSVVVFYAPELNKEIGPENGLINEE 420
            Y  C + DL+ GL+ H+D  G  ++ QD++  GLQ+LKD+QW  VP +  ++++ +GDQ+E++TNG +KS +HRVV   +  R S+  FY P  +  I P   L+ +E
Sbjct:  162 YPPCPKADLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVVAQTDGTRMSIASFYNPGNDAVIYPAPALVEKE 269          
BLAST of CN185539 vs. ExPASy Swiss-Prot
Match: GAOX3_ARATH (Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana GN=20ox3 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.915e-19
Identity = 55/156 (35.26%), Postives = 81/156 (51.92%), Query Frame = 1
Query:   43 ENCFLNQFGNQSQYQARFNYYAHCQRPDLVLGLKPHSDGTGYTIVLQDEEG-LQVLKDEQWFTVPKISEAVLVLMGDQMEIMTNGIFKSPVHRVVTSAEKERFSVVVFYAPELNKEIGPENGLINEECPRLFKNMKDYANIHW----EYYQKGQRA 495
            E  +  +F   S    R NYY  C++P+L LG  PH D T  TI+ QD+ G LQV  D +W ++P    A +V +GD    +TNG +KS +HR V ++E+ER +   F  P+  K + P   L+N     +    + Y +  W    E+ QK  RA
Sbjct:  211 ERRYFKEFFEDSDSIFRLNYYPQCKQPELALGTGPHCDPTSLTILHQDQVGGLQVFVDNKWQSIPPNPHAFVVNIGDTFMALTNGRYKSCLHRAVVNSERERKTFAFFLCPKGEKVVKPPEELVN----GVKSGERKYPDFTWSMFLEFTQKHYRA 362          
BLAST of CN185539 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.009e-18
Identity = 41/115 (35.65%), Postives = 73/115 (63.48%), Query Frame = 1
Query:   82 YQARFNYYAHCQRPDLVLGLKPHSDGTGYTIVLQDEE--GLQVLKDEQWFTVPKISEAVLVLMGDQMEIMTNGIFKSPVHRVVTSAEKERFSVVVFYAPELNKEIGPENGLINEE 420
            +  + + Y  C +PDL+ GL+ HSD  G  ++ QD++  GLQ+LKD +W  VP +  ++++ +GDQ+E++TNG +KS +HRV+  ++  R S+  FY P  +  I P   ++ ++
Sbjct:  155 FGTKVSNYPPCPKPDLIKGLRAHSDAGGIILLFQDDKVSGLQLLKDGEWVDVPPMHHSIVINLGDQIEVITNGKYKSVMHRVIAQSDGTRMSIASFYNPGNDSFISPAPAVLEKK 269          
BLAST of CN185539 vs. ExPASy Swiss-Prot
Match: ACCO_ACTDE (1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa GN=ACO PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.318e-18
Identity = 41/115 (35.65%), Postives = 72/115 (62.61%), Query Frame = 1
Query:   82 YQARFNYYAHCQRPDLVLGLKPHSDGTGYTIVLQDEE--GLQVLKDEQWFTVPKISEAVLVLMGDQMEIMTNGIFKSPVHRVVTSAEKERFSVVVFYAPELNKEIGPENGLINEE 420
            +  + + Y  C RP+L+ GL+ H+D  G  ++ QD +  GLQ+LKD +W  VP +  ++++ +GDQ+E++TNG +KS +HRV+   +  R S+  FY P  +  + P   L+++E
Sbjct:  155 FGTKVSNYPPCPRPELIKGLRAHTDAGGIILLFQDNKVSGLQLLKDGEWIDVPPMKHSIVINIGDQLEVITNGKYKSVMHRVIAQPDGNRMSIASFYNPGSDAVMYPAPALVDKE 269          
The following BLAST results are available for this feature:
BLAST of CN185539 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
ACCO4_PETHY1.192e-1931.451-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
ACCO3_PETHY1.192e-1932.121-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
ACCO_TOBAC1.556e-1939.131-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]
ACCO1_ARATH2.033e-1933.751-aminocyclopropane-1-carboxylate oxidase OS=Arabi... [more]
ACCO2_MALDO2.655e-1933.331-aminocyclopropane-1-carboxylate oxidase 2 OS=Mal... [more]
ACCO1_DORSP2.655e-1935.201-aminocyclopropane-1-carboxylate oxidase 1 OS=Dor... [more]
ACCO_DIOKA4.529e-1939.811-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
GAOX3_ARATH5.915e-1935.26Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana G... [more]
ACCO1_MALDO1.009e-1835.651-aminocyclopropane-1-carboxylate oxidase 1 OS=Mal... [more]
ACCO_ACTDE1.318e-1835.651-aminocyclopropane-1-carboxylate oxidase OS=Actin... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001H24_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001H24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185539 ID=CN185539; Name=CN185539; organism=Citrus sinensis; type=EST; length=670bp
ATGATCACTTCCAAAGCCATGGCAAAGTCATTGAAGTTAGAGGAAAATTG
CTTCCTGAATCAGTTTGGGAATCAATCACAGTATCAAGCGAGGTTTAACT
ATTATGCACATTGTCAGAGACCTGATCTTGTCCTGGGCTTAAAACCCCAT
TCAGATGGAACCGGATACACCATTGTATTGCAGGACGAAGAAGGTCTCCA
AGTCCTCAAAGATGAGCAATGGTTTACAGTACCCAAAATATCTGAAGCTG
TCCTAGTCCTCATGGGTGACCAAATGGAGATAATGACTAATGGAATCTTC
AAGAGCCCAGTGCATAGAGTAGTTACTAGTGCAGAAAAGGAGAGGTTTTC
TGTAGTAGTATTTTATGCACCAGAATTGAACAAGGAGATTGGACCAGAAA
ATGGCTTAATCAACGAGGAATGCCCAAGATTATTCAAGAACATGAAAGAT
TACGCCAATATTCACTGGGAATACTACCAGAAAGGACAGCGAGCACTTCA
CACCGCAAAAGGGTGATATTGTCCTGTAGCATACTGATAGAATAGTCTCA
TGTTCTGTCACTTCTTTATCCTTCCATCTTTCTTTTCCTTCTTCGTTTTG
TGTGGTTGTGAAACTTAATCCTAGAGCTTTTAAATAAACACTACCTTATG
GGTGAAAAAAAAAAAAAAAA
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