CN185539
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185539 vs. ExPASy Swiss-Prot
Match: G3O22_WHEAT (Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aestivum GN=GA3ox2-2 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12 Identity = 38/103 (36.89%), Postives = 58/103 (56.31%), Query Frame = 1 Query: 97 NYYAHCQRPDLVLGLKPHSDGTGYTIVLQD-EEGLQVLKD--EQWFTVPKISEAVLVLMGDQMEIMTNGIFKSPVHRVVTSAEKERFSVVVFYAPELNKEIGP 396 N+Y C P LGL H+D +T VLQ GLQ+ + ++W TVP + A++V +GD +I+TNG F S HR V + + +R S+ F P + ++ P Sbjct: 212 NWYPKCPDPKRALGLIAHTDSGFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRDSDRISLGYFLGPPAHVKVAP 314
BLAST of CN185539 vs. ExPASy Swiss-Prot
Match: G3O21_WHEAT (Gibberellin 3-beta-dioxygenase 2-1 OS=Triticum aestivum GN=GA3ox2-1 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12 Identity = 38/103 (36.89%), Postives = 58/103 (56.31%), Query Frame = 1 Query: 97 NYYAHCQRPDLVLGLKPHSDGTGYTIVLQD-EEGLQVLKD--EQWFTVPKISEAVLVLMGDQMEIMTNGIFKSPVHRVVTSAEKERFSVVVFYAPELNKEIGP 396 N+Y C P LGL H+D +T VLQ GLQ+ + ++W TVP + A++V +GD +I+TNG F S HR V + + +R S+ F P + ++ P Sbjct: 212 NWYPKCPDPKRALGLIAHTDSGFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRDSDRISLGYFLGPPAHVKVAP 314
BLAST of CN185539 vs. ExPASy Swiss-Prot
Match: G2OX7_ARATH (Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.362e-12 Identity = 42/125 (33.60%), Postives = 67/125 (53.60%), Query Frame = 1 Query: 19 MAKSLKLEENCFLNQFGNQSQYQARFNYYAHCQRPDLVLGLKPHSDGTGYTIVLQDE-EGLQVLKDEQWFTVPKISEAVLVLMGDQMEIMTNGIFKSPVHRVVTSAEKERFSVVVFYAPELNKEI 390 + K + + F N F ++ + R N Y V GL PH+D + TI+ QD+ GL++ + QW +V EA+ V +GD + ++NG+++S HRV++ A ER S+ F P L EI Sbjct: 174 LGKQVNVSSEYFENIFELENSF-LRLNKYHPSVFGSEVFGLVPHTDTSFLTILSQDQIGGLELENNGQWISVKPCLEALTVNIGDMFQALSNGVYQSVRHRVISPANIERMSIAFFVCPYLETEI 297
BLAST of CN185539 vs. ExPASy Swiss-Prot
Match: FNSI_PETCR (Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.362e-12 Identity = 38/103 (36.89%), Postives = 57/103 (55.34%), Query Frame = 1 Query: 97 NYYAHCQRPDLVLGLKPHSDGTGYTIVLQDEEG-LQVLKD--EQWFTVPKISEAVLVLMGDQMEIMTNGIFKSPVHRVVTSAEKERFSVVVFYAPELNKEIGP 396 NYY C +PDL LG++ H+D TI+LQD G LQ +D + W TV + A +V +GD ++NG F++ H+ V ++ R S+ F P N + P Sbjct: 201 NYYPTCPQPDLTLGVRRHTDPGTITILLQDMVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFRNADHQAVVNSTSSRLSIATFQNPAQNAIVYP 303
BLAST of CN185539 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.146e-12 Identity = 40/127 (31.50%), Postives = 71/127 (55.91%), Query Frame = 1 Query: 97 NYYAHCQRPDLVLGLKPHSDGTGYTIVLQDEEG-LQVLKDEQWFTVPKISEAVLVLMGDQMEIMTNGIFKSPVHRVVTSAEKERFSVVVFYAP---ELNKEIGPENGLINEECPRLFK--NMKDYAN 459 NYY C +P+L +G H+D TI+LQD+ G LQVL W VP +++V +GD +++++N + S HR +++ R S+ F+ + +K GP L++E+ P ++ +KD+ + Sbjct: 219 NYYPPCPQPELTMGTIQHTDIGFVTILLQDDMGGLQVLHQNHWVDVPPTPGSLVVNIGDFLQLLSNDKYLSVEHRAISNNVGSRMSITCFFGESPYQSSKLYGPITELLSEDNPPKYRATTVKDHTS 345
BLAST of CN185539 vs. ExPASy Swiss-Prot
Match: G3OX3_ARATH (Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=At4g21690 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.560e-11 Identity = 38/107 (35.51%), Postives = 57/107 (53.27%), Query Frame = 1 Query: 91 RFNYYAHCQRPDLVLGLKPHSDGTGYTIVLQDE-EGLQVLKDEQ----WFTVPKISEAVLVLMGDQMEIMTNGIFKSPVHRVVTSAEKERFSVVVFYAPELNKEIGP 396 + N Y C P L +GL PH+D + TI+ Q GL++ ++ W V I +++V+MGD I++NG F+S +HR V + R S F P N +IGP Sbjct: 207 QLNSYPVCPDPHLAMGLAPHTDSSLLTILYQGNIPGLEIESPQEEGSRWIGVEPIEGSLVVIMGDLSHIISNGQFRSTMHRAVVNKTHHRVSAAYFAGPPKNLQIGP 313
BLAST of CN185539 vs. ExPASy Swiss-Prot
Match: G2OX1_ARATH (Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA2OX1 PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.038e-11 Identity = 43/134 (32.09%), Postives = 68/134 (50.75%), Query Frame = 1 Query: 91 RFNYYAHCQRPDL-------VLGLKPHSDGTGYTIVLQDE-EGLQV-LKDEQWFTVPKISEAVLVLMGDQMEIMTNGIFKSPVHRVVTSAEKERFSVVVFYAPELNKEIGPENGLINEECPRLFKNM--KDYAN 459 R N+Y C + V+G H+D +++ + GLQ+ L D W +VP + +GD +++MTNG FKS HRV+ + +K R S++ F P L + I P LI+ E RL++ +Y N Sbjct: 171 RLNHYPPCPLSNKKTNGGKNVIGFGEHTDPQIISVLRSNNTSGLQINLNDGSWISVPPDHTSFFFNVGDSLQVMTNGRFKSVRHRVLANCKKSRVSMIYFAGPSLTQRIAPLTCLIDNEDERLYEEFTWSEYKN 304
BLAST of CN185539 vs. ExPASy Swiss-Prot
Match: G2OX3_ARATH (Gibberellin 2-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=GA2OX3 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.661e-11 Identity = 43/134 (32.09%), Postives = 71/134 (52.99%), Query Frame = 1 Query: 91 RFNYYAHCQRPDLV--LGLKPHSDGTGYTIVLQ-DEEGLQV-LKDEQWFTVPKISEAVLVLMGDQMEIMTNGIFKSPVHRVVTSAEKERFSVVVFYAPELNKEIGPENGLINEECPRLFKNMKDYANIHWEYYQ 480 R N+Y + + +G H+D +++ D EGLQ+ +KD W V + VL+GD +++MTNG FKS HRVVT+ ++ R S++ F P L+++I P + L+ ++ L Y W Y+ Sbjct: 181 RMNHYPEKEETPVKEEIGFGEHTDPQLISLLRSNDTEGLQICVKDGTWVDVTPDHSSFFVLVGDTLQVMTNGRFKSVKHRVVTNTKRSRISMIYFAGPPLSEKIAPLSCLVPKQDDCL------YNEFTWSQYK 308
BLAST of CN185539 vs. ExPASy Swiss-Prot
Match: IDS2_HORVU (Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=IDS2 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.743e-11 Identity = 35/117 (29.91%), Postives = 58/117 (49.57%), Query Frame = 1 Query: 97 NYYAHCQRPDLVLGLKPHSDGTGYTIVLQDE-EGLQVLKDEQWFTVPKISEAVLVLMGDQMEIMTNGIFKSPVHRVVTSAEKERFSVVVFYAPELNKEIGPENGLINEECPRLFKNM 444 NYY P LGL PH D T++L GL++ W V + ++++ G Q+E++TNG K+ HR T+ + R SV F P + +GP ++E+ P ++ + Sbjct: 191 NYYPPSPNPSRTLGLPPHCDRDLMTVLLPGAVPGLEIAYKGGWIKVQPVPNSLVINFGLQLEVVTNGYLKAVEHRAATNFAEPRLSVASFIVPADDCVVGPAEEFVSEDNPPRYRTL 307 The following BLAST results are available for this feature:
BLAST of CN185539 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 79
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185539 ID=CN185539; Name=CN185539; organism=Citrus sinensis; type=EST; length=670bpback to top |