CN185528
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185528 vs. ExPASy Swiss-Prot
Match: PABP_PICGU (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Pichia guilliermondii GN=PAB1 PE=3 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.461e-13 Identity = 50/178 (28.09%), Postives = 87/178 (48.88%), Query Frame = 2 Query: 92 APDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 625 A + + SL++G+L P + E+ + IF G+ S +V R+ T S GY ++ F HA R ++ N + + + R+ W+ RR DG IF+ +L + + L +TF A + + KV TD G+SK +GFV + ++ +NG+L + R + +G Sbjct: 49 AGEEGEEASASLYVGELNPSVNEALLFEIFSPIGQVSSIRVCRDAVTKKSLGYAYVNFHKHADGSRAIEELNYSLVDG--RPCRIMWSQRDPSLRRNGDG---NIFIKNLHPAIDNKALHDTFSA-FGRILSCKVATDE-LGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVG 219
BLAST of CN185528 vs. ExPASy Swiss-Prot
Match: EPABA_XENLA (Embryonic polyadenylate-binding protein A OS=Xenopus laevis GN=epabp-A PE=1 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.461e-13 Identity = 53/184 (28.80%), Postives = 94/184 (51.09%), Query Frame = 2 Query: 95 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTE------QNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 625 P G+ +++I +L ++ + F G +S KV+ ++ S GYGF+ F +H AA R +QT NG + + ++ R YGA +FT +++ + D+ D L+E F A + + KV+ D +GRS+G+GFV +G+ E ++++EMNG + R + +G Sbjct: 91 PGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHG--SRGYGFVHFETHEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVM------EFTNVYIKNFGEDMDDKRLREIFSA-FGNTLSVKVMMD-DSGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVG 264
BLAST of CN185528 vs. ExPASy Swiss-Prot
Match: ELAV4_RAT (ELAV-like protein 4 OS=Rattus norvegicus GN=Elavl4 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.461e-13 Identity = 46/164 (28.05%), Postives = 85/164 (51.83%), Query Frame = 2 Query: 101 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 592 A+ D +L + L M + S+FG GE S K++R+K T S GYGF+ ++ AE+ + T NG ++ + + ++++A + R D ++V L +T L++ F + Y + ++++ D+ TG S+G GF+RF E ++ +NG Sbjct: 33 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQT--KTIKVSYARPSSASIR-----DANLYVSGLPKTMTQKELEQLF-SQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNG 188
BLAST of CN185528 vs. ExPASy Swiss-Prot
Match: ELAV4_MOUSE (ELAV-like protein 4 OS=Mus musculus GN=Elavl4 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.461e-13 Identity = 46/164 (28.05%), Postives = 85/164 (51.83%), Query Frame = 2 Query: 101 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 592 A+ D +L + L M + S+FG GE S K++R+K T S GYGF+ ++ AE+ + T NG ++ + + ++++A + R D ++V L +T L++ F + Y + ++++ D+ TG S+G GF+RF E ++ +NG Sbjct: 45 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQT--KTIKVSYARPSSASIR-----DANLYVSGLPKTMTQKELEQLF-SQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNG 200
BLAST of CN185528 vs. ExPASy Swiss-Prot
Match: PABP_NEUCR (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Neurospora crassa GN=pab-1 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.908e-13 Identity = 50/177 (28.25%), Postives = 90/177 (50.85%), Query Frame = 2 Query: 95 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 625 P AS+ SL++G+L P + E+ + +F G S +V R+ T S GY ++ + + A E+ L+ N T + + R+ W+ R+ G IF+ +L A + + L +TF A + ++ KV D G SKGYGFV + + +++ +NG+L + + + +G Sbjct: 56 PQASA----SLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKALEELNYTLIKG--RPCRIMWSQRDPALRKTGAG---NIFIKNLDAAIDNKALHDTF-AAFGNILSCKVAQDE-HGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVG 221
BLAST of CN185528 vs. ExPASy Swiss-Prot
Match: PABP_MAGGR (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Magnaporthe grisea GN=PAB1 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.492e-13 Identity = 48/177 (27.12%), Postives = 89/177 (50.28%), Query Frame = 2 Query: 95 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 625 P AS+ SL++G+L P + E+ + +F G S +V R+ T S GY ++ + + A E+ L+ N T + + R+ W+ R+ G +F+ +L + + L +TF A + ++ KV D G SKGYGFV + + +++ +NG+L + + + +G Sbjct: 57 PQASA----SLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKALEELNYTLIKG--RPCRIMWSQRDPALRKTGQG---NVFIKNLDVAIDNKALHDTF-AAFGNILSCKVAQDE-NGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVG 222
BLAST of CN185528 vs. ExPASy Swiss-Prot
Match: ELAV2_XENTR (ELAV-like protein 2 OS=Xenopus tropicalis GN=elavl2 PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 2.492e-13 Identity = 45/163 (27.61%), Postives = 85/163 (52.15%), Query Frame = 2 Query: 104 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 592 + D +L + L M + + S+FG GE S K++R+K T S GYGF+ ++ AE+ + T NG ++ + + ++++A + R D ++V L +T L++ F + Y + ++++ D+ TG S+G GF+RF E ++ +NG Sbjct: 62 TEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQT--KTIKVSYARPSSASIR-----DANLYVSGLPKTMTQKELEQLF-SQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNG 216
BLAST of CN185528 vs. ExPASy Swiss-Prot
Match: ELAV2_PONAB (ELAV-like protein 2 OS=Pongo abelii GN=ELAVL2 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.492e-13 Identity = 45/163 (27.61%), Postives = 85/163 (52.15%), Query Frame = 2 Query: 104 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 592 + D +L + L M + + S+FG GE S K++R+K T S GYGF+ ++ AE+ + T NG ++ + + ++++A + R D ++V L +T L++ F + Y + ++++ D+ TG S+G GF+RF E ++ +NG Sbjct: 34 TEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQT--KTIKVSYARPSSASIR-----DANLYVSGLPKTMTQKELEQLF-SQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNG 188
BLAST of CN185528 vs. ExPASy Swiss-Prot
Match: ELAV2_MOUSE (ELAV-like protein 2 OS=Mus musculus GN=Elavl2 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.492e-13 Identity = 45/163 (27.61%), Postives = 85/163 (52.15%), Query Frame = 2 Query: 104 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 592 + D +L + L M + + S+FG GE S K++R+K T S GYGF+ ++ AE+ + T NG ++ + + ++++A + R D ++V L +T L++ F + Y + ++++ D+ TG S+G GF+RF E ++ +NG Sbjct: 34 TEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQT--KTIKVSYARPSSASIR-----DANLYVSGLPKTMTQKELEQLF-SQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNG 188
BLAST of CN185528 vs. ExPASy Swiss-Prot
Match: ELAV2_HUMAN (ELAV-like protein 2 OS=Homo sapiens GN=ELAVL2 PE=1 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 2.492e-13 Identity = 45/163 (27.61%), Postives = 85/163 (52.15%), Query Frame = 2 Query: 104 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 592 + D +L + L M + + S+FG GE S K++R+K T S GYGF+ ++ AE+ + T NG ++ + + ++++A + R D ++V L +T L++ F + Y + ++++ D+ TG S+G GF+RF E ++ +NG Sbjct: 34 TEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQT--KTIKVSYARPSSASIR-----DANLYVSGLPKTMTQKELEQLF-SQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNG 188 The following BLAST results are available for this feature:
BLAST of CN185528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 107
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185528 ID=CN185528; Name=CN185528; organism=Citrus sinensis; type=EST; length=625bpback to top |