CN185473

Overview
NameCN185473
Unique NameCN185473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_HUMAN (Peptidyl-prolyl cis-trans isomerase A OS=Homo sapiens GN=PPIA PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 4.174e-23
Identity = 65/135 (48.15%), Postives = 82/135 (60.74%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            LG +  E+  D+VPKTAENF AL     G+ Y G+ FHR I GFM Q             SI+G+KF DE    LKH   GILSMAN+GPNTNGSQFFI  AK   L+G + VFG+V  G  +++ ME+  + +G
Sbjct:   17 LGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDE-NFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNG 150          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_GORGO (Peptidyl-prolyl cis-trans isomerase A OS=Gorilla gorilla gorilla GN=PPIA PE=3 SV=3)

HSP 1 Score: 108.227 bits (269), Expect = 4.174e-23
Identity = 65/135 (48.15%), Postives = 82/135 (60.74%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            LG +  E+  D+VPKTAENF AL     G+ Y G+ FHR I GFM Q             SI+G+KF DE    LKH   GILSMAN+GPNTNGSQFFI  AK   L+G + VFG+V  G  +++ ME+  + +G
Sbjct:   17 LGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDE-NFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNG 150          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_CERAE (Peptidyl-prolyl cis-trans isomerase A OS=Cercopithecus aethiops GN=PPIA PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 4.174e-23
Identity = 65/135 (48.15%), Postives = 82/135 (60.74%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            LG +  E+  D+VPKTAENF AL     G+ Y G+ FHR I GFM Q             SI+G+KF DE    LKH   GILSMAN+GPNTNGSQFFI  AK   L+G + VFG+V  G  +++ ME+  + +G
Sbjct:   17 LGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDE-NFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNG 150          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPID_YARLI (Peptidyl-prolyl cis-trans isomerase D OS=Yarrowia lipolytica GN=CPR6 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.451e-23
Identity = 62/151 (41.06%), Postives = 87/151 (57.62%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCASG----------YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            +G I  E+  D+VPKTAENF ALC             ++ G+ FHR IK FM+Q             SI+G+KF DE      H+   +LSMAN+GPNTNGSQFFI+  + PHL+  + VFG+++ G  ++  +E+ +TG  DRP   + I
Sbjct:   17 IGKIYFELFADKVPKTAENFRALCTGEKGNTQAGIPLHFKGSSFHRVIKDFMVQGGDFTAGNGTGGESIYGEKFPDEAFP-YPHDQPFLLSMANAGPNTNGSQFFITTTETPHLDNKHVVFGKLLSGKGIVRQIERTETGEQDRPKQPVTI 166          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIB_GIBZE (Peptidyl-prolyl cis-trans isomerase B OS=Gibberella zeae GN=CPR2 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.451e-23
Identity = 61/144 (42.36%), Postives = 88/144 (61.11%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            LG +   +    VP+T ENF AL     G+ Y+G+ FHR IK FMIQ             SI+G +F DE    LKH  +G+LSMAN+G +TNGSQFFI+      L+G + VFG V+ G+E+++ +E ++TG+ DRP+  ++I
Sbjct:   48 LGRVVMGLYGKTVPETTENFRALATGEKGFGYEGSAFHRVIKNFMIQGGDFTKGDGTGGKSIYGDRFKDE-NFKLKHTKKGLLSMANAGRDTNGSQFFITTVVTSWLDGKHVVFGEVLEGYEIIEKIENSKTGAADRPVEAVKI 190          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_MOUSE (Peptidyl-prolyl cis-trans isomerase A OS=Mus musculus GN=Ppia PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 5.451e-23
Identity = 65/135 (48.15%), Postives = 82/135 (60.74%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            LG +  E+  D+VPKTAENF AL     G+ Y G+ FHR I GFM Q             SI+G+KF DE    LKH   GILSMAN+GPNTNGSQFFI  AK   L+G + VFG+V  G  +++ ME+  + +G
Sbjct:   17 LGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSSFHRIIPGFMCQGGDFTRHNGTGGRSIYGEKFEDE-NFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNG 150          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_CRIGR (Peptidyl-prolyl cis-trans isomerase A OS=Cricetulus griseus GN=PPIA PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 5.451e-23
Identity = 65/135 (48.15%), Postives = 82/135 (60.74%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            LG +  E+  D+VPKTAENF AL     G+ Y G+ FHR I GFM Q             SI+G+KF DE    LKH   GILSMAN+GPNTNGSQFFI  AK   L+G + VFG+V  G  +++ ME+  + +G
Sbjct:   17 LGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSSFHRIIPGFMCQGGDFTRHNGTGGRSIYGEKFEDE-NFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNG 150          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: NKTR_MOUSE (NK-tumor recognition protein OS=Mus musculus GN=Nktr PE=1 SV=3)

HSP 1 Score: 107.842 bits (268), Expect = 5.451e-23
Identity = 63/152 (41.45%), Postives = 86/152 (56.58%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCASGY-----------YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            +G I  ++  D  PKT +NFL LC+              Y G+ FHR +K FMIQ             SI+G  F DE    LKH+   +LSMAN G +TNGSQFFI+    PHL+G++ VFG VI GFEV++ +E  +T +  RP A++R+
Sbjct:   20 VGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNGKGGESIYGGYFKDE-NFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDAASRPYADVRV 170          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: NKTR_HUMAN (NK-tumor recognition protein OS=Homo sapiens GN=NKTR PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 5.451e-23
Identity = 63/152 (41.45%), Postives = 86/152 (56.58%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCASGY-----------YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            +G I  ++  D  PKT +NFL LC+              Y G+ FHR +K FMIQ             SI+G  F DE    LKH+   +LSMAN G +TNGSQFFI+    PHL+G++ VFG VI GFEV++ +E  +T +  RP A++R+
Sbjct:   20 VGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNGKGGESIYGGYFKDE-NFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDAASRPYADVRV 170          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CYP40_ARATH (Peptidyl-prolyl cis-trans isomerase CYP40 OS=Arabidopsis thaliana GN=CYP40 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.451e-23
Identity = 68/152 (44.74%), Postives = 83/152 (54.61%), Query Frame = 1
Query:   37 GDIKCEIACDEVPKTAENFLALCASG-----------YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRIN 456
            G I  E+  D VPKTAENF  LC              +Y G  FHR IKGFMIQ             SI+G KF+DE  E LKH  +G+LSMANSGPNTNGSQFFI+  +  HL+G + VFGRV  G  V+  +E         P  ++ I+
Sbjct:   18 GRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNRFHRVIKGFMIQGGDISANDGTGGESIYGLKFDDENFE-LKHERKGMLSMANSGPNTNGSQFFITTTRTSHLDGKHVVFGRVTKGMGVVRSIEHVSIEEQSCPSQDVVIH 168          
The following BLAST results are available for this feature:
BLAST of CN185473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
PPIA_HUMAN4.174e-2348.15Peptidyl-prolyl cis-trans isomerase A OS=Homo sapi... [more]
PPIA_GORGO4.174e-2348.15Peptidyl-prolyl cis-trans isomerase A OS=Gorilla g... [more]
PPIA_CERAE4.174e-2348.15Peptidyl-prolyl cis-trans isomerase A OS=Cercopith... [more]
PPID_YARLI5.451e-2341.06Peptidyl-prolyl cis-trans isomerase D OS=Yarrowia ... [more]
PPIB_GIBZE5.451e-2342.36Peptidyl-prolyl cis-trans isomerase B OS=Gibberell... [more]
PPIA_MOUSE5.451e-2348.15Peptidyl-prolyl cis-trans isomerase A OS=Mus muscu... [more]
PPIA_CRIGR5.451e-2348.15Peptidyl-prolyl cis-trans isomerase A OS=Cricetulu... [more]
NKTR_MOUSE5.451e-2341.45NK-tumor recognition protein OS=Mus musculus GN=Nk... [more]
NKTR_HUMAN5.451e-2341.45NK-tumor recognition protein OS=Homo sapiens GN=NK... [more]
CYP40_ARATH5.451e-2344.74Peptidyl-prolyl cis-trans isomerase CYP40 OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001G07_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185473 ID=CN185473; Name=CN185473; organism=Citrus sinensis; type=EST; length=688bp
AGGGGTAAGATGTCGGTAACTCTACACACTAATCTGGGTGATATTAAGTG
CGAGATTGCTTGCGACGAAGTCCCTAAGACGGCTGAGAATTTTTTGGCAC
TATGCGCGAGTGGTTACTACGATGGGACCATTTTTCACCGGAATATTAAA
GGTTTTATGATTCAAGGTGGAGACCCAACAGGCACTGGAAAAGGCGGAAC
AAGCATATGGGGCAAGAAGTTCAATGATGAGATAAGGGAGTCCCTCAAGC
ATAATGCTAGAGGGATACTGTCAATGGCCAATAGTGGCCCTAACACTAAT
GGAAGCCAATTCTTCATCTCTTATGCAAAGCAGCCCCATCTTAACGGATT
GTACACTGTGTTTGGTAGAGTAATTCATGGGTTCGAAGTTCTTGACCTTA
TGGAAAAGGCTCAAACTGGATCAGGGGACCGGCCACTTGCGGAGATAAGG
ATCAATCGAGTTACCATACATGCTAACCCACTTGCTGTCTAGCTTTGTCT
GAAAATTTCTTGTTGTATAACATTGTAAAGAGGCTTAGTGTGGAGTGGGA
ACAGTGACTTACGATTAAACTCCCAGTAGACTCTGTACATTTTTCTTTTC
CCAGTTATGACTATGGGCTTGAAGGAAGAAGTAACCGCAGAATTTTATGT
AGCATCAAATGGTGAGATTGACGATTGAGAAAAAAAAA
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