CN185473

Overview
NameCN185473
Unique NameCN185473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPID_CANAL (Peptidyl-prolyl cis-trans isomerase D OS=Candida albicans GN=CPR6 PE=3 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 7.120e-23
Identity = 64/154 (41.56%), Postives = 85/154 (55.19%), Query Frame = 1
Query:   37 GDIKCEIACDEVPKTAENFLALCASGY-----------YDGTIFHRNIKGFMIQXXXXXXXXXXXX----SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            G +  ++  D VPKTA NF +LC               Y  +IFHR IK FM Q                SI+G+KF DE    L HN   +LSMANSGPNTNGSQFFI+    PHL+G + VFG VI G  ++  +E+++ G+ DRP+ + +I
Sbjct:   18 GRVVFKLYDDVVPKTAANFRSLCTGDKGISPKSGKPLSYKDSIFHRVIKDFMCQGGDFTAPSDHLGTGGESIYGEKFEDE-NFKLNHNKPFLLSMANSGPNTNGSQFFITTVPTPHLDGKHVVFGEVIEGKSIVRQLERSEKGANDRPVEDWKI 170          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CP18D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Arabidopsis thaliana GN=CYP18-4 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.120e-23
Identity = 65/144 (45.14%), Postives = 80/144 (55.56%), Query Frame = 1
Query:   28 TNLGDIKCEIACDEVPKTAENFLALCASG----------YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            T +G I+ E+  D  P TAENF ALC             ++ G+IFHR I GFM Q             SI+G KF DE     KH   GILSMANSGPNTNGSQFFI   K   L+G + VFG+V+ G +V+  +EK  + SG
Sbjct:   15 TPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIFHRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDE-NFIKKHTGAGILSMANSGPNTNGSQFFICTDKTSWLDGKHVVFGQVVKGLDVVKAIEKVGSDSG 157          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPID_MOUSE (40 kDa peptidyl-prolyl cis-trans isomerase OS=Mus musculus GN=Ppid PE=1 SV=3)

HSP 1 Score: 107.071 bits (266), Expect = 9.299e-23
Identity = 65/146 (44.52%), Postives = 83/146 (56.85%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCASG-----------YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRP 435
            +G I  E+  D VPKTAENF ALC              ++ G  FHR IK FMIQ             SI+G+KF DE     KH+  G+LSMAN+GPNTNGSQFFI+    PHL+G + VFG+VI G  V   +E  +  +G++P
Sbjct:   29 VGRIVLELFADIVPKTAENFRALCTGEKGTGSTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDE-NFHYKHDREGLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGQVIKGLGVARTLENVEV-NGEKP 172          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_SAGOE (Peptidyl-prolyl cis-trans isomerase A OS=Saguinus oedipus GN=PPIA PE=3 SV=3)

HSP 1 Score: 107.071 bits (266), Expect = 9.299e-23
Identity = 64/135 (47.41%), Postives = 82/135 (60.74%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            LG +  E+  D+VPKTAENF AL     G+ Y G+ FHR I GFM Q             SI+G+KF+DE    LKH   GILSMAN+GPNTNGSQFFI   K   L+G + VFG+V  G  +++ ME+  + +G
Sbjct:   17 LGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDE-NFILKHTGPGILSMANAGPNTNGSQFFICTVKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNG 150          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_AOTTR (Peptidyl-prolyl cis-trans isomerase A OS=Aotus trivirgatus GN=PPIA PE=2 SV=3)

HSP 1 Score: 107.071 bits (266), Expect = 9.299e-23
Identity = 64/135 (47.41%), Postives = 82/135 (60.74%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            LG +  E+  D+VPKTAENF AL     G+ Y G+ FHR I GFM Q             SI+G+KF+DE    LKH   GILSMAN+GPNTNGSQFFI   K   L+G + VFG+V  G  +++ ME+  + +G
Sbjct:   17 LGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDE-NFILKHTGPGILSMANAGPNTNGSQFFICTVKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNG 150          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPI1_STAES (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_0648 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.299e-23
Identity = 65/183 (35.52%), Postives = 92/183 (50.27%), Query Frame = 1
Query:    7 KMSVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLK-HNARGILSMANSGPNTNGSQFFISYAKQ----------------------------PHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTI 468
            ++ V +HTN GD+  ++  D  PKT ENF+    +GYYDG  FHR I  FM+Q            SI+G  F DE   SL+  N  G LSMAN+GPNTNGSQFFI   K+                            P L+  +TVFG++I G   L+ +   + G+ D+P+ ++ I  + +
Sbjct:   15 EIKVVMHTNKGDMTFKLFPDIAPKTVENFVTHSKNGYYDGVTFHRVINDFMVQGGDPTATGMGGESIYGSAFEDEF--SLEAFNLYGALSMANAGPNTNGSQFFIVQMKEVPENMLSQLADGGWPQPIVEAYGEKGGTPWLDQKHTVFGQLIEGESTLEDIANTKVGAQDKPVYDVVIESIDV 195          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPI1_STAEQ (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP0540 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.299e-23
Identity = 65/183 (35.52%), Postives = 92/183 (50.27%), Query Frame = 1
Query:    7 KMSVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLK-HNARGILSMANSGPNTNGSQFFISYAKQ----------------------------PHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTI 468
            ++ V +HTN GD+  ++  D  PKT ENF+    +GYYDG  FHR I  FM+Q            SI+G  F DE   SL+  N  G LSMAN+GPNTNGSQFFI   K+                            P L+  +TVFG++I G   L+ +   + G+ D+P+ ++ I  + +
Sbjct:   15 EIKVVMHTNKGDMTFKLFPDIAPKTVENFVTHSKNGYYDGVTFHRVINDFMVQGGDPTATGMGGESIYGSAFEDEF--SLEAFNLYGALSMANAGPNTNGSQFFIVQMKEVPENMLSQLADGGWPQPIVEAYGEKGGTPWLDQKHTVFGQLIEGESTLEDIANTKVGAQDKPVYDVVIESIDV 195          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPID_RHIOR (Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus oryzae GN=cyp12 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.214e-22
Identity = 69/147 (46.94%), Postives = 86/147 (58.50%), Query Frame = 1
Query:   37 GDIKCEIACDEVPKTAENFLALCA-------SGY---YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAE 444
            G I  E+  D VPKTAENF ALC        SG    Y G++FHR IK FMIQ             SI+G+KF DE    LKH    +LSMAN+GP TNGSQFFI+    PHL+G + VFG+V+ G  V+  +E  +T S DRP+ +
Sbjct:   18 GRIVFELFKDIVPKTAENFRALCTGEKGEGKSGKPLSYQGSLFHRIIKNFMIQGGDFTAGNGTGGESIYGEKFEDE-NFVLKHEKPFLLSMANAGPGTNGSQFFITTVPTPHLDGKHVVFGKVLKGKAVVRALENLETVS-DRPVED 162          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_RAT (Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus GN=Ppia PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.214e-22
Identity = 65/135 (48.15%), Postives = 82/135 (60.74%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            LG +  E+  D+VPKTAENF AL     G+ Y G+ FHR I GFM Q             SI+G+KF DE    LKH   GILSMAN+GPNTNGSQFFI  AK   L+G + VFG+V  G  +++ ME+  + +G
Sbjct:   17 LGRVCFELFADKVPKTAENFRALSTGEKGFGYKGSSFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDE-NFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMSIVEAMERFGSRNG 150          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPI1_STAS1 (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP1821 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.214e-22
Identity = 64/182 (35.16%), Postives = 94/182 (51.65%), Query Frame = 1
Query:    7 KMSVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFI-------------------------SYAK---QPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTI 468
            ++ + +HTN GD+  ++  D  PKT ENF+    +GYY+G  FHR I  FM+Q            SI+G+ F DE  +    N  G LSMAN+GP+TNGSQFFI                         +YA+    P L+  +TVFG++I G + L+ +   + G  D+PL +I I+ + I
Sbjct:   15 EIKLIMHTNKGDMTFKLLPDVAPKTVENFVTHAKNGYYNGVTFHRVINDFMVQGGDPTATGMGGESIYGEPFEDEFSKE-AFNIYGALSMANAGPHTNGSQFFIVQMNEVPESMLSQLADGGWPEPIVKAYAETGGTPWLDQKHTVFGQLIEGKDTLEDIANTKVGPQDKPLHDITIDSIEI 195          
The following BLAST results are available for this feature:
BLAST of CN185473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
PPID_CANAL7.120e-2341.56Peptidyl-prolyl cis-trans isomerase D OS=Candida a... [more]
CP18D_ARATH7.120e-2345.14Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Ara... [more]
PPID_MOUSE9.299e-2344.5240 kDa peptidyl-prolyl cis-trans isomerase OS=Mus ... [more]
PPIA_SAGOE9.299e-2347.41Peptidyl-prolyl cis-trans isomerase A OS=Saguinus ... [more]
PPIA_AOTTR9.299e-2347.41Peptidyl-prolyl cis-trans isomerase A OS=Aotus tri... [more]
PPI1_STAES9.299e-2335.52Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAEQ9.299e-2335.52Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPID_RHIOR1.214e-2246.94Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus ... [more]
PPIA_RAT1.214e-2248.15Peptidyl-prolyl cis-trans isomerase A OS=Rattus no... [more]
PPI1_STAS11.214e-2235.16Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001G07_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185473 ID=CN185473; Name=CN185473; organism=Citrus sinensis; type=EST; length=688bp
AGGGGTAAGATGTCGGTAACTCTACACACTAATCTGGGTGATATTAAGTG
CGAGATTGCTTGCGACGAAGTCCCTAAGACGGCTGAGAATTTTTTGGCAC
TATGCGCGAGTGGTTACTACGATGGGACCATTTTTCACCGGAATATTAAA
GGTTTTATGATTCAAGGTGGAGACCCAACAGGCACTGGAAAAGGCGGAAC
AAGCATATGGGGCAAGAAGTTCAATGATGAGATAAGGGAGTCCCTCAAGC
ATAATGCTAGAGGGATACTGTCAATGGCCAATAGTGGCCCTAACACTAAT
GGAAGCCAATTCTTCATCTCTTATGCAAAGCAGCCCCATCTTAACGGATT
GTACACTGTGTTTGGTAGAGTAATTCATGGGTTCGAAGTTCTTGACCTTA
TGGAAAAGGCTCAAACTGGATCAGGGGACCGGCCACTTGCGGAGATAAGG
ATCAATCGAGTTACCATACATGCTAACCCACTTGCTGTCTAGCTTTGTCT
GAAAATTTCTTGTTGTATAACATTGTAAAGAGGCTTAGTGTGGAGTGGGA
ACAGTGACTTACGATTAAACTCCCAGTAGACTCTGTACATTTTTCTTTTC
CCAGTTATGACTATGGGCTTGAAGGAAGAAGTAACCGCAGAATTTTATGT
AGCATCAAATGGTGAGATTGACGATTGAGAAAAAAAAA
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