CN185473

Overview
NameCN185473
Unique NameCN185473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIH_ASPFU (Peptidyl-prolyl cis-trans isomerase H OS=Aspergillus fumigatus GN=cyp3 PE=3 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 1.939e-20
Identity = 63/153 (41.18%), Postives = 84/153 (54.90%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCASGY---------YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGK-KFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINR 459
            LG IK E+  D  P+TAENF   C             Y  + FHR IK FMIQ             +I+G  KF DE    LKH+  G+LSMANSGPNTNG QFFI+    P LNG + VFG+V+ G +++ ++E  +T   D+P  ++ I +
Sbjct:   27 LGRIKMELFADVTPRTAENFRRFCTGESKNSQGKPQGYKNSKFHRVIKDFMIQGGDFVNGDGTGSCTIYGTPKFADE-NFVLKHDRAGVLSMANSGPNTNGCQFFITTTATPFLNGKHVVFGQVVDGMDIVRMIENTRT-IRDKPSQDVIITQ 177          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIC_HUMAN (Peptidyl-prolyl cis-trans isomerase C OS=Homo sapiens GN=PPIC PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.532e-20
Identity = 63/132 (47.73%), Postives = 76/132 (57.58%), Query Frame = 1
Query:   70 VPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            VPKT ENF+AL     GY Y G+ FHR IK FMIQ             SI+G+ F DE    LKH   G +SMAN+GP+TNGSQFFI+  K   L+G + VFG+VI G  V+  +E   T   DRPL    I
Sbjct:   63 VPKTVENFVALATGEKGYGYKGSKFHRVIKDFMIQGGDITTGDGTGGVSIYGETFPDE-NFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVIDGMTVVHSIELQATDGHDRPLTNCSI 193          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CYP3_CAEEL (Peptidyl-prolyl cis-trans isomerase 3 OS=Caenorhabditis elegans GN=cyn-3 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.532e-20
Identity = 65/150 (43.33%), Postives = 85/150 (56.67%), Query Frame = 1
Query:   37 GDIKCEIACDEVPKTAENFLALCA-------SG---YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            G I  E+  D VPKTA NF ALC        SG   ++ G+ FHR I  FMIQ             SI+G+KF DE  +  KH   G+LSMAN+GPNTNGSQFF+   K   L+G + VFGRV+ G +V+  +E   + SG +P+ +  I
Sbjct:   18 GRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTGGESIYGEKFPDENFKE-KHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGSQSG-KPVKDCMI 165          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIE_RHIOR (Peptidyl-prolyl cis-trans isomerase E OS=Rhizopus oryzae GN=cyp10 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.307e-20
Identity = 64/138 (46.38%), Postives = 79/138 (57.25%), Query Frame = 1
Query:   25 HTNLGDIKCEIACDEVPKTAENFLALCA--SGY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            +T  G I+ E+  D VPKTAENF ALC   +G+ Y  + FHR I  FM Q             SI+G KF DE    LKH   G LSMAN+G NTNGSQFFI   K   L+G + VFG+V+ G  V+  ME+  + SG
Sbjct:  165 NTLAGRIEIELRGDVVPKTAENFRALCTGEAGFGYKKSSFHRIIPQFMCQGGDFTKGNGTGGKSIYGGKFEDE-NFVLKHTGPGTLSMANAGSNTNGSQFFICTEKTTWLDGKHVVFGQVVSGMNVVREMERCGSASG 301          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIE_MOUSE (Peptidyl-prolyl cis-trans isomerase E OS=Mus musculus GN=Ppie PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 4.319e-20
Identity = 64/143 (44.76%), Postives = 81/143 (56.64%), Query Frame = 1
Query:   37 GDIKCEIACDEVPKTAENFLALCA--SGY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            G I+  +  D VP TAENF  LC    G+ + G+ FHR I  FM Q             SI+GKKF+DE    LKH   G+LSMANSGPNTNGSQFF++  K   L+G + VFG V  G +VL  +E AQ     +P  ++ I
Sbjct:  154 GRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDE-NFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIE-AQGSKDGKPKQKVMI 294          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CYPH_ALLCE (Peptidyl-prolyl cis-trans isomerase OS=Allium cepa GN=CYP PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.319e-20
Identity = 60/135 (44.44%), Postives = 75/135 (55.56%), Query Frame = 1
Query:   52 EIACDEVPKTAENFLALCASG---------YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            E+  D VP+TAENF ALC            +Y G+ FHR I GFM Q             SI+G KF DE     KH   G+LSMAN+GP TNGSQFFI   K   L+G + VFG+V+ G +V+  +EK  + SG
Sbjct:    2 ELFQDVVPQTAENFRALCTGEKGMGDRKPLHYKGSSFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFKDE-NFIKKHTGPGVLSMANAGPGTNGSQFFICTEKTAWLDGKHVVFGQVVEGMDVVRAIEKVGSQSG 135          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIB_CHICK (Peptidyl-prolyl cis-trans isomerase B OS=Gallus gallus GN=PPIB PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.641e-20
Identity = 59/132 (44.70%), Postives = 80/132 (60.61%), Query Frame = 1
Query:   70 VPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            VPKT ENF+AL     G+ + G+ FHR IK FMIQ             SI+G +F DE    LKH   G +SMAN+G +TNGSQFFI+  K   L+G + VFG+V+ G +V+  +E  +T S D+PL ++ I
Sbjct:   60 VPKTVENFVALATGEKGFGFKGSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGDRFPDE-NFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMDVVRKVENTKTDSRDKPLKDVTI 190          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CYP11_CAEEL (Peptidyl-prolyl cis-trans isomerase 11 OS=Caenorhabditis elegans GN=cyn-11 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.641e-20
Identity = 60/143 (41.96%), Postives = 76/143 (53.15%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCASGY--------YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRP 435
            +G I  E+  D  P+TAENF   C   Y        Y    FHR IK FMIQ             SI+G KF DE  E LKH   G+LSMAN+G +TNG QFFI+ AK   L+  + VFGRV+ G   +  +E   TG+ ++P
Sbjct:   30 IGTIVIELFADVTPRTAENFRQFCTGEYKKDGVPNGYKNCTFHRVIKDFMIQGGDFCNGDGTGLMSIYGSKFRDENFE-LKHIGPGMLSMANAGSDTNGCQFFITCAKTDFLDNKHVVFGRVLDGMLTVRKIENVPTGANNKP 171          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIL4_RHIOR (Peptidyl-prolyl cis-trans isomerase-like 4 OS=Rhizopus oryzae GN=cyp13 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.368e-20
Identity = 61/169 (36.09%), Postives = 87/169 (51.48%), Query Frame = 1
Query:   10 MSVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWG-----KKFNDEIRESLKHNARGILSMANSGP------NTNGSQFFISYAKQ-PHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTIHANP 480
            MSV + T+LGDI  ++  +E PKT  NFL LC   YY+   F    K FM Q            S++G     + F  EI  +LKH  RG++SMA +          +GSQFFI+  +   +L+G YT+FG +  GF+VLD + +A      RP  +IRI    +  +P
Sbjct:    1 MSVLIETSLGDIVIDLYTEECPKTTLNFLKLCKIKYYNFAPFFNVQKDFMAQTGDPTGKGDQGQSVYGILGGSRYFPAEIHPTLKHVRRGMVSMAVAADASIETGGVSGSQFFITLGENLDYLDGKYTLFGEIAEGFDVLDKINEAYCDEQGRPFRDIRIKHTVVLDDP 169          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIE_HUMAN (Peptidyl-prolyl cis-trans isomerase E OS=Homo sapiens GN=PPIE PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.368e-20
Identity = 64/143 (44.76%), Postives = 81/143 (56.64%), Query Frame = 1
Query:   37 GDIKCEIACDEVPKTAENFLALCA--SGY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            G I+  +  D VP TAENF  LC    G+ + G+ FHR I  FM Q             SI+GKKF+DE    LKH   G+LSMANSGPNTNGSQFF++  K   L+G + VFG V  G +VL  +E AQ     +P  ++ I
Sbjct:  154 GRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDE-NFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIE-AQGSKDGKPKQKVII 294          
The following BLAST results are available for this feature:
BLAST of CN185473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
PPIH_ASPFU1.939e-2041.18Peptidyl-prolyl cis-trans isomerase H OS=Aspergill... [more]
PPIC_HUMAN2.532e-2047.73Peptidyl-prolyl cis-trans isomerase C OS=Homo sapi... [more]
CYP3_CAEEL2.532e-2043.33Peptidyl-prolyl cis-trans isomerase 3 OS=Caenorhab... [more]
PPIE_RHIOR3.307e-2046.38Peptidyl-prolyl cis-trans isomerase E OS=Rhizopus ... [more]
PPIE_MOUSE4.319e-2044.76Peptidyl-prolyl cis-trans isomerase E OS=Mus muscu... [more]
CYPH_ALLCE4.319e-2044.44Peptidyl-prolyl cis-trans isomerase OS=Allium cepa... [more]
PPIB_CHICK5.641e-2044.70Peptidyl-prolyl cis-trans isomerase B OS=Gallus ga... [more]
CYP11_CAEEL5.641e-2041.96Peptidyl-prolyl cis-trans isomerase 11 OS=Caenorha... [more]
PPIL4_RHIOR7.368e-2036.09Peptidyl-prolyl cis-trans isomerase-like 4 OS=Rhiz... [more]
PPIE_HUMAN7.368e-2044.76Peptidyl-prolyl cis-trans isomerase E OS=Homo sapi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001G07_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185473 ID=CN185473; Name=CN185473; organism=Citrus sinensis; type=EST; length=688bp
AGGGGTAAGATGTCGGTAACTCTACACACTAATCTGGGTGATATTAAGTG
CGAGATTGCTTGCGACGAAGTCCCTAAGACGGCTGAGAATTTTTTGGCAC
TATGCGCGAGTGGTTACTACGATGGGACCATTTTTCACCGGAATATTAAA
GGTTTTATGATTCAAGGTGGAGACCCAACAGGCACTGGAAAAGGCGGAAC
AAGCATATGGGGCAAGAAGTTCAATGATGAGATAAGGGAGTCCCTCAAGC
ATAATGCTAGAGGGATACTGTCAATGGCCAATAGTGGCCCTAACACTAAT
GGAAGCCAATTCTTCATCTCTTATGCAAAGCAGCCCCATCTTAACGGATT
GTACACTGTGTTTGGTAGAGTAATTCATGGGTTCGAAGTTCTTGACCTTA
TGGAAAAGGCTCAAACTGGATCAGGGGACCGGCCACTTGCGGAGATAAGG
ATCAATCGAGTTACCATACATGCTAACCCACTTGCTGTCTAGCTTTGTCT
GAAAATTTCTTGTTGTATAACATTGTAAAGAGGCTTAGTGTGGAGTGGGA
ACAGTGACTTACGATTAAACTCCCAGTAGACTCTGTACATTTTTCTTTTC
CCAGTTATGACTATGGGCTTGAAGGAAGAAGTAACCGCAGAATTTTATGT
AGCATCAAATGGTGAGATTGACGATTGAGAAAAAAAAA
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