CN185473

Overview
NameCN185473
Unique NameCN185473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIC_BOVIN (Peptidyl-prolyl cis-trans isomerase C OS=Bos taurus GN=PPIC PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.368e-20
Identity = 61/132 (46.21%), Postives = 76/132 (57.58%), Query Frame = 1
Query:   70 VPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            VPKT ENF+AL     GY Y G+ FHR IK FMIQ             SI+G+ F DE    LKH   G +SMAN+GP+TNGSQFFI+  K   L+G + VFG+V+ G  V+  +E   T   DRP  +  I
Sbjct:   63 VPKTVENFVALATGEKGYGYKGSKFHRVIKDFMIQGGDFTRGDGTGGISIYGETFPDE-NFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVLDGMTVVHSIELQATDGHDRPFTDCSI 193          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PAL4A_HUMAN (Peptidylprolyl cis-trans isomerase A-like 4A OS=Homo sapiens GN=PPIAL4A PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.368e-20
Identity = 62/130 (47.69%), Postives = 77/130 (59.23%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDE--IRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLME 405
            LG I  +   D++PKTAENF AL     G+ Y G+ FHR I GFM Q             SI+G+KF+DE  IR   KH   GILSMAN+GPNTNGSQFFI  AK   L+G +  FG+V     +++ ME
Sbjct:   17 LGRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTHPNGTGDKSIYGEKFDDENLIR---KHTGSGILSMANAGPNTNGSQFFICTAKTEWLDGKHVAFGKVKERVNIVEAME 143          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIE_BOVIN (Peptidyl-prolyl cis-trans isomerase E OS=Bos taurus GN=PPIE PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.623e-20
Identity = 63/144 (43.75%), Postives = 82/144 (56.94%), Query Frame = 1
Query:   37 GDIKCEIACDEVPKTAENFLALCA--SGY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRIN 456
            G I+  +  D VP TAENF  LC    G+ + G+ FHR I  FM Q             SI+GKKF+DE    LKH   G+LSMANSGPNTNGSQFF++  K   L+G + VFG +  G +VL  +E AQ     +P  ++ I+
Sbjct:  154 GRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDE-NFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEITDGLDVLRQIE-AQGSKDGKPKQKVIIS 295          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIB_SCHMA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma mansoni GN=CYP PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.623e-20
Identity = 59/137 (43.07%), Postives = 76/137 (55.47%), Query Frame = 1
Query:   70 VPKTAENFLALCA--------SGYYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            VPKT ENF  L          +  Y G+ FHR IK FMIQ             SI+G +F DE    L+H   G LSMAN+GP+TNGSQFFI+  K   L+G + VFG+V+ G  ++  +E   T S DRP+  I+I
Sbjct:   57 VPKTVENFKQLSIGTQLKDGRTASYKGSTFHRVIKSFMIQGGDFTNHDGTGGFSIYGDRFPDE-NFKLRHVGAGWLSMANAGPDTNGSQFFITTVKTSWLDGKHVVFGKVVEGMNIVRQIESETTDSRDRPVKSIKI 192          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIB_HUMAN (Peptidyl-prolyl cis-trans isomerase B OS=Homo sapiens GN=PPIB PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 9.623e-20
Identity = 59/132 (44.70%), Postives = 80/132 (60.61%), Query Frame = 1
Query:   70 VPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            VPKT +NF+AL     G+ Y  + FHR IK FMIQ             SI+G++F DE    LKH   G +SMAN+G +TNGSQFFI+  K   L+G + VFG+V+ G EV+  +E  +T S D+PL ++ I
Sbjct:   69 VPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDE-NFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKPLKDVII 199          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA2_RHIOR (Peptidyl-prolyl cis-trans isomerase A2 OS=Rhizopus oryzae GN=cyp1 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.623e-20
Identity = 60/134 (44.78%), Postives = 80/134 (59.70%), Query Frame = 1
Query:   37 GDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            G I+ ++  D VPKTA+NF ALC    G+ Y G+ FHR I  FM+Q             SI+G+KF DE    LKH+  G+LSMAN+GPNTNGSQFFI+      L+G + VFG+V    E++  +E   + SG
Sbjct:   15 GRIEFQLFEDVVPKTAKNFRALCTGEQGFGYKGSKFHRVIPQFMLQGGDFTRGDGTGGKSIYGEKFADE-NFKLKHSEPGLLSMANAGPNTNGSQFFITTVPCSWLDGAHVVFGKVTKNMELVSKIESLGSASG 147          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CYPH_YEAST (Peptidyl-prolyl cis-trans isomerase OS=Saccharomyces cerevisiae GN=CPR1 PE=1 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 9.623e-20
Identity = 59/135 (43.70%), Postives = 81/135 (60.00%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            +G +  ++  D VPKTAENF ALC    G+ Y G+ FHR I  FM+Q             SI+G KF DE  +   H+  G+LSMAN+GPNTNGSQFFI+    P L+G + VFG V+ G++++  +E   + SG
Sbjct:   15 IGRVVFKLYNDIVPKTAENFRALCTGEKGFGYAGSPFHRVIPDFMLQGGDFTAGNGTGGKSIYGGKFPDENFKK-HHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVVDGYDIVKKVESLGSPSG 148          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CYPH_ENCCU (Peptidyl-prolyl cis-trans isomerase OS=Encephalitozoon cuniculi GN=CPR1 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.623e-20
Identity = 61/136 (44.85%), Postives = 78/136 (57.35%), Query Frame = 1
Query:   31 NLGDIKCEIACDEVPKTAENFLALCASGY---YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            +LG I  ++  D VPKTA+NF  LC       Y G+ FHR I GFM+Q             SI+G+KF DE  E LKH   GILSMAN G +TNGSQFFI+  K   L+  + VFG V+ G +V+  + K  + SG
Sbjct:   19 SLGRIVMKLEDDIVPKTAKNFRTLCERPKGEGYKGSTFHRIIPGFMVQGGDYTAHNGTGGRSIYGEKFPDENFE-LKHTKEGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDVVHKIAKYGSESG 153          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CYP6_CAEEL (Peptidyl-prolyl cis-trans isomerase 6 OS=Caenorhabditis elegans GN=cyn-6 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.623e-20
Identity = 60/144 (41.67%), Postives = 86/144 (59.72%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALC--ASGY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            +G I   +  + VPKT +NF+ L   A G  Y G+ FHR I+ FMIQ             SI+G++F DE    L+H   G LSMAN+G +TNGSQFFI+ AK   L+G + VFG+++ G +V+  +E    G+GDRP+ ++ I
Sbjct:   39 VGKIVIGLFGEVVPKTVKNFVELAQRAEGEGYVGSKFHRVIENFMIQGGDFTRGDGTGGRSIYGERFEDE-NFKLQHYGPGWLSMANAGEDTNGSQFFITTAKTSWLDGKHVVFGKILEGMDVVREIEATPKGAGDRPIEDVVI 181          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CWC27_GIBZE (Peptidyl-prolyl isomerase CWC27 OS=Gibberella zeae GN=CWC27 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.623e-20
Identity = 67/188 (35.64%), Postives = 86/188 (45.74%), Query Frame = 1
Query:   13 SVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIW-------------------------GKKFNDEIRESLKHNARGILSMAN-SGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG------DRPLAEIRINRVTIHANP 480
            SV +HT  G++  E+   + P T  NFL L   GYYD TIFHR + GF++Q            SI+                         G  F DE    LK N RG+L  AN S P+TN SQFF +      LNG  T+FGR I G  V +L   A+ G G      +RP   ++I R+ I  NP
Sbjct:   14 SVIIHTTRGELSVELFAKQAPLTCRNFLQLALDGYYDNTIFHRLVPGFILQGGDPTGTGNGGESIYDGGAFSGDLDPWPMDQRMGKNAGPTGINFKDEFHSRLKFNRRGLLGSANESRPDTNSSQFFFTLDTAEELNGKNTMFGR-IAGDTVYNL---AKMGEGEVDEATERPTYPVKIERIEILINP 197          
The following BLAST results are available for this feature:
BLAST of CN185473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
PPIC_BOVIN7.368e-2046.21Peptidyl-prolyl cis-trans isomerase C OS=Bos tauru... [more]
PAL4A_HUMAN7.368e-2047.69Peptidylprolyl cis-trans isomerase A-like 4A OS=Ho... [more]
PPIE_BOVIN9.623e-2043.75Peptidyl-prolyl cis-trans isomerase E OS=Bos tauru... [more]
PPIB_SCHMA9.623e-2043.07Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]
PPIB_HUMAN9.623e-2044.70Peptidyl-prolyl cis-trans isomerase B OS=Homo sapi... [more]
PPIA2_RHIOR9.623e-2044.78Peptidyl-prolyl cis-trans isomerase A2 OS=Rhizopus... [more]
CYPH_YEAST9.623e-2043.70Peptidyl-prolyl cis-trans isomerase OS=Saccharomyc... [more]
CYPH_ENCCU9.623e-2044.85Peptidyl-prolyl cis-trans isomerase OS=Encephalito... [more]
CYP6_CAEEL9.623e-2041.67Peptidyl-prolyl cis-trans isomerase 6 OS=Caenorhab... [more]
CWC27_GIBZE9.623e-2035.64Peptidyl-prolyl isomerase CWC27 OS=Gibberella zeae... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001G07_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185473 ID=CN185473; Name=CN185473; organism=Citrus sinensis; type=EST; length=688bp
AGGGGTAAGATGTCGGTAACTCTACACACTAATCTGGGTGATATTAAGTG
CGAGATTGCTTGCGACGAAGTCCCTAAGACGGCTGAGAATTTTTTGGCAC
TATGCGCGAGTGGTTACTACGATGGGACCATTTTTCACCGGAATATTAAA
GGTTTTATGATTCAAGGTGGAGACCCAACAGGCACTGGAAAAGGCGGAAC
AAGCATATGGGGCAAGAAGTTCAATGATGAGATAAGGGAGTCCCTCAAGC
ATAATGCTAGAGGGATACTGTCAATGGCCAATAGTGGCCCTAACACTAAT
GGAAGCCAATTCTTCATCTCTTATGCAAAGCAGCCCCATCTTAACGGATT
GTACACTGTGTTTGGTAGAGTAATTCATGGGTTCGAAGTTCTTGACCTTA
TGGAAAAGGCTCAAACTGGATCAGGGGACCGGCCACTTGCGGAGATAAGG
ATCAATCGAGTTACCATACATGCTAACCCACTTGCTGTCTAGCTTTGTCT
GAAAATTTCTTGTTGTATAACATTGTAAAGAGGCTTAGTGTGGAGTGGGA
ACAGTGACTTACGATTAAACTCCCAGTAGACTCTGTACATTTTTCTTTTC
CCAGTTATGACTATGGGCTTGAAGGAAGAAGTAACCGCAGAATTTTATGT
AGCATCAAATGGTGAGATTGACGATTGAGAAAAAAAAA
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