CN185473

Overview
NameCN185473
Unique NameCN185473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIH_NEUCR (Peptidyl-prolyl cis-trans isomerase H OS=Neurospora crassa GN=cyp-3 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.257e-19
Identity = 58/139 (41.73%), Postives = 75/139 (53.96%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCASGY---------YDGTIFHRNIKGFMIQXXXXXXXXXXXXS-IWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTG 420
            LG I  E+  D VP+TAENF   C             Y G+ FHR I  FM Q            + I+G K   +    LKH+  G+LSMAN+GPNTNGSQFFI+    P L+G + VFG+V+ G +V+  ME  +TG
Sbjct:   25 LGRITFELFKDVVPRTAENFRQFCTGESKNNLGRPQGYKGSKFHRIIPNFMCQGGDFLNGDGTGSTCIYGTKSFADENFLLKHDTPGLLSMANAGPNTNGSQFFITTVPTPFLDGKHVVFGKVVDGMDVVKKMENTKTG 163          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIE_PONAB (Peptidyl-prolyl cis-trans isomerase E OS=Pongo abelii GN=PPIE PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.641e-19
Identity = 61/134 (45.52%), Postives = 76/134 (56.72%), Query Frame = 1
Query:   37 GDIKCEIACDEVPKTAENFLALCA--SGY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            G I+  +  D VP TAENF  LC    G+ + G+ FHR I  FM Q             SI+GKKF+DE    LKH   G+LSMANSGPNTNGSQFF++  K   L+G + VFG V  G +VL  +E   +  G
Sbjct:  154 GRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDE-NFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEARGSKDG 286          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CYP5_CAEEL (Peptidyl-prolyl cis-trans isomerase 5 OS=Caenorhabditis elegans GN=cyn-5 PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.641e-19
Identity = 58/132 (43.94%), Postives = 77/132 (58.33%), Query Frame = 1
Query:   70 VPKTAENFLALCASGY---YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            VPKTA NF+ L        Y G+ FHR I  FMIQ             SI+G+KF DE    LKH   G LSMAN+G +TNGSQFFI+  K P L+G + VFG+++ G +V+  +E+ +   GDRP  ++ I
Sbjct:   54 VPKTATNFIELAKKPKGEGYPGSKFHRVIADFMIQGGDFTRGDGTGGRSIYGEKFADE-NFKLKHYGAGWLSMANAGADTNGSQFFITTVKTPWLDGRHVVFGKILEGMDVVRKIEQTEKLPGDRPKQDVII 184          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIB_RAT (Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus GN=Ppib PE=2 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 2.144e-19
Identity = 58/132 (43.94%), Postives = 80/132 (60.61%), Query Frame = 1
Query:   70 VPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            VPKT +NF+AL     G+ Y  + FHR IK FMIQ             SI+G++F DE    LKH   G +SMAN+G +TNGSQFFI+  K   L+G + VFG+V+ G +V+  +E  +T S D+PL ++ I
Sbjct:   69 VPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDE-NFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKVENTKTDSRDKPLKDVII 199          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIB_MOUSE (Peptidyl-prolyl cis-trans isomerase B OS=Mus musculus GN=Ppib PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.144e-19
Identity = 58/132 (43.94%), Postives = 80/132 (60.61%), Query Frame = 1
Query:   70 VPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            VPKT +NF+AL     G+ Y  + FHR IK FMIQ             SI+G++F DE    LKH   G +SMAN+G +TNGSQFFI+  K   L+G + VFG+V+ G +V+  +E  +T S D+PL ++ I
Sbjct:   69 VPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDE-NFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKVESTKTDSRDKPLKDVII 199          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CYPH_LUPLU (Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.144e-19
Identity = 63/141 (44.68%), Postives = 76/141 (53.90%), Query Frame = 1
Query:   37 GDIKCEIACDEVPKTAENFLALCA-------SG---YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            G I  E+  D  P+TAENF ALC        SG   +Y G+ FHR I  FM Q             SI+G KF DE     +H   GILSMAN+G  TNGSQFFI   K   L+G + VFG+VI G  V+  +EK  +GSG
Sbjct:   18 GRIVMELYADTTPRTAENFRALCTGEKGVGRSGKPLHYKGSTFHRVIPNFMCQGGDFTAGNGTGAESIYGAKFADE-NFIKRHTGPGILSMANAGAGTNGSQFFICTEKTEWLDGKHVVFGKVIEGMNVVRDIEKVGSGSG 157          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CYPH_BRANA (Peptidyl-prolyl cis-trans isomerase OS=Brassica napus GN=CYP PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.144e-19
Identity = 63/141 (44.68%), Postives = 77/141 (54.61%), Query Frame = 1
Query:   37 GDIKCEIACDEVPKTAENFLALCA-------SG---YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            G I  E+  D VP+TAENF ALC        SG   +Y G+ FHR I  FM Q             SI+G KF DE     KH   GILSM N+G NTNGSQFFI   K   L+G + VFG+V+ G +V+  +EK  + SG
Sbjct:   18 GRIVMELYADTVPETAENFRALCTGERGIGKSGKPLHYKGSAFHRVIPKFMCQGGDFTAGNGTGGESIYGMKFKDE-NFVKKHTGPGILSMRNAGSNTNGSQFFICTEKTSWLDGKHVVFGQVVEGMDVVRDIEKVGSDSG 157          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIH_RHIOR (Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus oryzae GN=cyp7 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.800e-19
Identity = 59/150 (39.33%), Postives = 77/150 (51.33%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCASGY--------YDGTIFHRNIKGFMIQXXXXXXXXXXXXSI--WGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            +G +K E+  D VP+TAENF  LC   Y        Y   +FHR IK FM+Q                 G +F DE     KH   G+LSMANSGPN+NG QFFI+      L+G + VFGR++ G   L  +E   TG  +RP   ++I
Sbjct:   24 VGRMKMELFSDIVPRTAENFRQLCTGEYKRNGVPQGYKNCLFHRVIKDFMVQGGDFIKGDGTGAMCIYGGDRFADE-NFIEKHTGAGLLSMANSGPNSNGCQFFITCDACDFLDGKHVVFGRLVDGLLTLRKIENVATGPNNRPKLPVKI 172          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIB_BOVIN (Peptidyl-prolyl cis-trans isomerase B OS=Bos taurus GN=PPIB PE=1 SV=4)

HSP 1 Score: 95.5153 bits (236), Expect = 2.800e-19
Identity = 58/133 (43.61%), Postives = 78/133 (58.65%), Query Frame = 1
Query:   70 VPKTAENFLALCAS----GYYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            VPKT +NF+AL       GY D   FHR IK FMIQ             SI+G++F DE    LKH   G +SMAN+G +TNGSQFFI+  K   L+G + VFG+V+ G +V+  +E  +T   D+PL ++ I
Sbjct:   69 VPKTVDNFVALATGEKGFGYKDSK-FHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDE-NFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMDVVRKVESTKTDGRDKPLKDVTI 199          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIB2_RHIOR (Peptidyl-prolyl cis-trans isomerase B2 OS=Rhizopus oryzae GN=cyp9 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.800e-19
Identity = 61/145 (42.07%), Postives = 83/145 (57.24%), Query Frame = 1
Query:   31 NLGDIKCEIACDEVPKTAENF--LALCASGY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            +LG I   +    VPKTAENF  LA   +GY Y G+ FHR I  FMIQ             SI+G +F DE    L+H   G+LSMAN+GP++NGSQFFI+      L+G + VFG+V+ G +V+  +EK  T    +P  ++ I
Sbjct:   46 SLGRIVFGLYGKTVPKTAENFKQLATGQNGYGYKGSTFHRVIDQFMIQGGDFTNHDGTGGKSIYGSRFPDE-NFKLRHTVPGLLSMANAGPDSNGSQFFITTVVTSWLDGKHVVFGKVLEGMDVVTKIEKTPTNYRSKPNVDVVI 189          
The following BLAST results are available for this feature:
BLAST of CN185473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
PPIH_NEUCR1.257e-1941.73Peptidyl-prolyl cis-trans isomerase H OS=Neurospor... [more]
PPIE_PONAB1.641e-1945.52Peptidyl-prolyl cis-trans isomerase E OS=Pongo abe... [more]
CYP5_CAEEL1.641e-1943.94Peptidyl-prolyl cis-trans isomerase 5 OS=Caenorhab... [more]
PPIB_RAT2.144e-1943.94Peptidyl-prolyl cis-trans isomerase B OS=Rattus no... [more]
PPIB_MOUSE2.144e-1943.94Peptidyl-prolyl cis-trans isomerase B OS=Mus muscu... [more]
CYPH_LUPLU2.144e-1944.68Peptidyl-prolyl cis-trans isomerase OS=Lupinus lut... [more]
CYPH_BRANA2.144e-1944.68Peptidyl-prolyl cis-trans isomerase OS=Brassica na... [more]
PPIH_RHIOR2.800e-1939.33Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus ... [more]
PPIB_BOVIN2.800e-1943.61Peptidyl-prolyl cis-trans isomerase B OS=Bos tauru... [more]
PPIB2_RHIOR2.800e-1942.07Peptidyl-prolyl cis-trans isomerase B2 OS=Rhizopus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001G07_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185473 ID=CN185473; Name=CN185473; organism=Citrus sinensis; type=EST; length=688bp
AGGGGTAAGATGTCGGTAACTCTACACACTAATCTGGGTGATATTAAGTG
CGAGATTGCTTGCGACGAAGTCCCTAAGACGGCTGAGAATTTTTTGGCAC
TATGCGCGAGTGGTTACTACGATGGGACCATTTTTCACCGGAATATTAAA
GGTTTTATGATTCAAGGTGGAGACCCAACAGGCACTGGAAAAGGCGGAAC
AAGCATATGGGGCAAGAAGTTCAATGATGAGATAAGGGAGTCCCTCAAGC
ATAATGCTAGAGGGATACTGTCAATGGCCAATAGTGGCCCTAACACTAAT
GGAAGCCAATTCTTCATCTCTTATGCAAAGCAGCCCCATCTTAACGGATT
GTACACTGTGTTTGGTAGAGTAATTCATGGGTTCGAAGTTCTTGACCTTA
TGGAAAAGGCTCAAACTGGATCAGGGGACCGGCCACTTGCGGAGATAAGG
ATCAATCGAGTTACCATACATGCTAACCCACTTGCTGTCTAGCTTTGTCT
GAAAATTTCTTGTTGTATAACATTGTAAAGAGGCTTAGTGTGGAGTGGGA
ACAGTGACTTACGATTAAACTCCCAGTAGACTCTGTACATTTTTCTTTTC
CCAGTTATGACTATGGGCTTGAAGGAAGAAGTAACCGCAGAATTTTATGT
AGCATCAAATGGTGAGATTGACGATTGAGAAAAAAAAA
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