CN185473

Overview
NameCN185473
Unique NameCN185473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIB_STRAT (Peptidyl-prolyl cis-trans isomerase cyp18 OS=Streptomyces antibioticus GN=cyp18 PE=1 SV=3)

HSP 1 Score: 79.7221 bits (195), Expect = 1.590e-14
Identity = 51/145 (35.17%), Postives = 73/145 (50.34%), Query Frame = 1
Query:   13 SVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGL--------YTVFGRVIHGFEVLDLMEKAQTGS 423
            +V L+T+ G I  E+   E PKT ENFLA   SG+YDGTIFHR I  FMIQ            ++      +E    L+++   +     + P++  +QFFI+      LN          Y VFGRV  G +V+D ++  +TGS
Sbjct:    3 TVELNTSAGRIVLELNDAEAPKTVENFLAYVRSGHYDGTIFHRVISDFMIQGGGFTPDMQQKSTL--APIQNEADNGLRNDNYTVAMARTNDPHSATAQFFINVKDNAFLNHTSKTPNGWGYAVFGRVTEGQDVVDAIKGVKTGS 145          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIB_BACSU (Peptidyl-prolyl cis-trans isomerase B OS=Bacillus subtilis GN=ppiB PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.590e-14
Identity = 46/115 (40.00%), Postives = 60/115 (52.17%), Query Frame = 1
Query:   43 IKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFE 387
            I+ E+  +  P T  NF  L   G+YDG  FHR I GF+ Q               G     E   +   +  G LSMA++G +T GSQFFI +  QPHLNG++TVFG+V  G E
Sbjct:   14 IEFELYPEAAPGTVANFEKLANEGFYDGLTFHRVIPGFVSQGGCPHGTGTGGP---GYTIKCETEGNPHTHEAGALSMAHAGKDTGGSQFFIVHEPQPHLNGVHTVFGKVTSGLE 125          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIL4_EMENI (Peptidyl-prolyl cis-trans isomerase-like 4 OS=Emericella nidulans GN=cyp6 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.076e-14
Identity = 58/176 (32.95%), Postives = 85/176 (48.30%), Query Frame = 1
Query:   10 MSVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQ----XXXXXXXXXXXXSIWG-------KKFNDEIRESLKHNARGILSMANSGPNTNG-------SQFFISYAKQ-PHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTIHANP 480
            MSV L T+LGDI  ++  DE PK  ENFL LC   YY+ + F+   K F  Q                SIWG       +     +   LKH+ +G +SMA + P+ +        SQF ++      +L+G   +FG+V+ GF+VL+ + +A      RPL +IRI    I  +P
Sbjct:    1 MSVLLETSLGDIVIDLLVDESPKACENFLKLCKVKYYNFSPFYSVQKNFSFQTGDPIGPDSPDSNGGSSIWGLLEGPSKQAVPLALPPKLKHDEKGTVSMA-AVPSPHDPDLRLVTSQFIVTLGDNLDYLDGKAVIFGKVVEGFDVLEKVNEAFIDDRGRPLKDIRIRHTVILDDP 175          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_PSEAE (Peptidyl-prolyl cis-trans isomerase A OS=Pseudomonas aeruginosa GN=ppiA PE=3 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.346e-13
Identity = 57/162 (35.19%), Postives = 81/162 (50.00%), Query Frame = 1
Query:    7 KMSVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKH---NARGILSMANSG-PNTNGSQFFISYAKQPHLNG-----LYTVFGRVIHGFEVLDLMEKAQT----GSGDRPLAEIRI 453
            K  V + T+LG+I+ E+   + P + +NFL    SGYYDGT+FHR I GFM+Q             +  KK    I+    +   N RG L+MA +G  ++  SQFFI+      LN       Y VFG+V+ G  V+D + K  T    G  D P  ++ I
Sbjct:   26 KPHVLIATSLGEIEVELDPAKAPISVKNFLEYVDSGYYDGTLFHRVIPGFMVQ------TGGFSAGMQEKKTRAPIKNEADNGLLNERGTLAMARTGVVDSATSQFFINLTDNDFLNHGARDFGYAVFGKVVRGMGVVDQIAKVPTTRRNGFADVPSDDVVI 181          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_ACIAD (Peptidyl-prolyl cis-trans isomerase OS=Acinetobacter sp. (strain ADP1) GN=rotA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.998e-13
Identity = 51/142 (35.92%), Postives = 74/142 (52.11%), Query Frame = 1
Query:   16 VTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMA-NSGPNTNGSQFFISYAKQPHLNGL-----YTVFGRVIHGFEVLDLMEKAQTGS 423
            V + TNLG+I+ E+  ++ P +A+NF +   + +Y+GTIFHR I  FMIQ            +       +E    L  N RG L+MA  S P++  SQFFI+ A    LN       Y VFG+VI G +V+D +    T +
Sbjct:   24 VEMKTNLGNIEIELYNNKAPISAKNFESYVKNNFYNGTIFHRVIPNFMIQGGGFETNMKEKAT--AAPIKNEASNGLA-NTRGTLAMARTSNPDSATSQFFINVADNNFLNASRTDAGYAVFGKVIKGMDVVDKIANVPTST 162          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIL4_USTMA (Peptidyl-prolyl cis-trans isomerase-like 4 OS=Ustilago maydis GN=CYP6 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.943e-12
Identity = 59/191 (30.89%), Postives = 82/191 (42.93%), Query Frame = 1
Query:   10 MSVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGK------------KFNDEIRE-SLKHNARGILSMA---------------NSGPNTNGSQFFISYAKQ-PHLNGLYTVFGRVIHGFE---VLDLMEKAQTGSGDRPLAEIRINRVTIHANPLA 486
            MSV L T+LGDI  ++  +  P++  NFL LC+  YY    F R  K F+ Q            SIW +             F  E  +  LKH  +G +S A                S     GSQFF++   +  +L+G +  FG V+ G E    LD +  A T    RPL +IRI  V +  +P A
Sbjct:    1 MSVLLETSLGDIVIDLHTELAPRSCTNFLKLCSKHYYKLNAFFRVEKDFLAQTGDPSNTGKGGASIWSQLPSTSQDSSTSTYFTPESSDGQLKHLKKGTVSFACFRKHVQGADEDGEGGSCELLAGSQFFVTLKDELDYLDGRHAPFGMVVEGHEPGGTLDKINHAFTDDQKRPLRDIRIRHVVVLEDPFA 191          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPI1_BRUAB (Probable peptidyl-prolyl cis-trans isomerase OS=Brucella abortus GN=ppi PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.315e-12
Identity = 53/163 (32.52%), Postives = 69/163 (42.33%), Query Frame = 1
Query:   13 SVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXX------SIWGKKFNDEIRESLKHN-ARGILSMANS-GPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTIHAN 477
            +V L    GD+  EI  D  PK       L   G Y+G  FHR I GFM Q                     G  + D   E  K    RG + MA S  PN+  SQFFI +   P LNG YTV G+V+ G + +D ++K             +I + TI A+
Sbjct:   32 TVILKLKDGDVALEIRPDLAPKHVAQIKKLVREGAYNGVAFHRVIPGFMAQTGDVKFGNMDKGFDAARVGTGGSNYPDLPAEFSKEPFVRGTVGMARSQNPNSANSQFFIMFDDGPFLNGQYTVVGKVVSGMDAVDKIKKGSEAENGAVKNPDKIIKATIEAD 194          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPI1_BRUA2 (Probable peptidyl-prolyl cis-trans isomerase OS=Brucella abortus (strain 2308) GN=ppi PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.315e-12
Identity = 53/163 (32.52%), Postives = 69/163 (42.33%), Query Frame = 1
Query:   13 SVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXX------SIWGKKFNDEIRESLKHN-ARGILSMANS-GPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTIHAN 477
            +V L    GD+  EI  D  PK       L   G Y+G  FHR I GFM Q                     G  + D   E  K    RG + MA S  PN+  SQFFI +   P LNG YTV G+V+ G + +D ++K             +I + TI A+
Sbjct:   32 TVILKLKDGDVALEIRPDLAPKHVAQIKKLVREGAYNGVAFHRVIPGFMAQTGDVKFGNMDKGFDAARVGTGGSNYPDLPAEFSKEPFVRGTVGMARSQNPNSANSQFFIMFDDGPFLNGQYTVVGKVVSGMDAVDKIKKGSEAENGAVKNPDKIIKATIEAD 194          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPI1_BRUSU (Probable peptidyl-prolyl cis-trans isomerase OS=Brucella suis GN=ppi PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.654e-12
Identity = 52/163 (31.90%), Postives = 69/163 (42.33%), Query Frame = 1
Query:   13 SVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXX------SIWGKKFNDEIRESLKHN-ARGILSMANS-GPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTIHAN 477
            +V L    GD+  E+  D  PK       L   G Y+G  FHR I GFM Q                     G  + D   E  K    RG + MA S  PN+  SQFFI +   P LNG YTV G+V+ G + +D ++K             +I + TI A+
Sbjct:   32 TVILKLKDGDVALELRPDLAPKHVAQIKKLVREGAYNGVAFHRVIPGFMAQTGDVKFGNMDKGFDAARVGTGGSNYPDLPAEFSKEPFVRGTVGMARSQNPNSANSQFFIMFDDGPFLNGQYTVVGKVVSGMDAVDKIKKGSEAENGAVKNPDKIIKATIEAD 194          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPI1_BRUME (Probable peptidyl-prolyl cis-trans isomerase OS=Brucella melitensis GN=ppi PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 5.654e-12
Identity = 52/163 (31.90%), Postives = 69/163 (42.33%), Query Frame = 1
Query:   13 SVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXX------SIWGKKFNDEIRESLKHN-ARGILSMANS-GPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTIHAN 477
            +V L    GD+  E+  D  PK       L   G Y+G  FHR I GFM Q                     G  + D   E  K    RG + MA S  PN+  SQFFI +   P LNG YTV G+V+ G + +D ++K             +I + TI A+
Sbjct:   32 TVILKLKDGDVALELRPDLAPKHVAQIKKLVREGAYNGVAFHRVIPGFMAQTGDVKFGNMDKGFDAARVGTGGSNYPDLPAEFSKEPFVRGTVGMARSQNPNSANSQFFIMFDDGPFLNGQYTVVGKVVSGMDAVDKIKKGSEAENGAVKNPDKIIKATIEAD 194          
The following BLAST results are available for this feature:
BLAST of CN185473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
PPIB_STRAT1.590e-1435.17Peptidyl-prolyl cis-trans isomerase cyp18 OS=Strep... [more]
PPIB_BACSU1.590e-1440.00Peptidyl-prolyl cis-trans isomerase B OS=Bacillus ... [more]
PPIL4_EMENI2.076e-1432.95Peptidyl-prolyl cis-trans isomerase-like 4 OS=Emer... [more]
PPIA_PSEAE1.346e-1335.19Peptidyl-prolyl cis-trans isomerase A OS=Pseudomon... [more]
PPIA_ACIAD2.998e-1335.92Peptidyl-prolyl cis-trans isomerase OS=Acinetobact... [more]
PPIL4_USTMA1.943e-1230.89Peptidyl-prolyl cis-trans isomerase-like 4 OS=Usti... [more]
PPI1_BRUAB3.315e-1232.52Probable peptidyl-prolyl cis-trans isomerase OS=Br... [more]
PPI1_BRUA23.315e-1232.52Probable peptidyl-prolyl cis-trans isomerase OS=Br... [more]
PPI1_BRUSU5.654e-1231.90Probable peptidyl-prolyl cis-trans isomerase OS=Br... [more]
PPI1_BRUME5.654e-1231.90Probable peptidyl-prolyl cis-trans isomerase OS=Br... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001G07_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185473 ID=CN185473; Name=CN185473; organism=Citrus sinensis; type=EST; length=688bp
AGGGGTAAGATGTCGGTAACTCTACACACTAATCTGGGTGATATTAAGTG
CGAGATTGCTTGCGACGAAGTCCCTAAGACGGCTGAGAATTTTTTGGCAC
TATGCGCGAGTGGTTACTACGATGGGACCATTTTTCACCGGAATATTAAA
GGTTTTATGATTCAAGGTGGAGACCCAACAGGCACTGGAAAAGGCGGAAC
AAGCATATGGGGCAAGAAGTTCAATGATGAGATAAGGGAGTCCCTCAAGC
ATAATGCTAGAGGGATACTGTCAATGGCCAATAGTGGCCCTAACACTAAT
GGAAGCCAATTCTTCATCTCTTATGCAAAGCAGCCCCATCTTAACGGATT
GTACACTGTGTTTGGTAGAGTAATTCATGGGTTCGAAGTTCTTGACCTTA
TGGAAAAGGCTCAAACTGGATCAGGGGACCGGCCACTTGCGGAGATAAGG
ATCAATCGAGTTACCATACATGCTAACCCACTTGCTGTCTAGCTTTGTCT
GAAAATTTCTTGTTGTATAACATTGTAAAGAGGCTTAGTGTGGAGTGGGA
ACAGTGACTTACGATTAAACTCCCAGTAGACTCTGTACATTTTTCTTTTC
CCAGTTATGACTATGGGCTTGAAGGAAGAAGTAACCGCAGAATTTTATGT
AGCATCAAATGGTGAGATTGACGATTGAGAAAAAAAAA
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