CN185473

Overview
NameCN185473
Unique NameCN185473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_MYCTU (Probable peptidyl-prolyl cis-trans isomerase A OS=Mycobacterium tuberculosis GN=ppiA PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 9.935e-25
Identity = 69/169 (40.83%), Postives = 89/169 (52.66%), Query Frame = 1
Query:   13 SVTLHTNLGDIKCEIACDEVPKTAENFLALC----------ASG-----YYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVI--HGFEVLDLMEKAQTGSGDRPLAEIRINRVTI 468
            + TLHTN GDIK  +  +  PKT  NF+ L           ASG     +YDG +FHR I+GFMIQ               G KF DE    L+ +   +L+MAN+GP TNGSQFFI+  K PHLN  +T+FG VI      V++ + K  T   DRP   + I  +TI
Sbjct:   16 TATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGP---GYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITI 181          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_MYCBO (Probable peptidyl-prolyl cis-trans isomerase A OS=Mycobacterium bovis GN=ppiA PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 9.935e-25
Identity = 69/169 (40.83%), Postives = 89/169 (52.66%), Query Frame = 1
Query:   13 SVTLHTNLGDIKCEIACDEVPKTAENFLALC----------ASG-----YYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVI--HGFEVLDLMEKAQTGSGDRPLAEIRINRVTI 468
            + TLHTN GDIK  +  +  PKT  NF+ L           ASG     +YDG +FHR I+GFMIQ               G KF DE    L+ +   +L+MAN+GP TNGSQFFI+  K PHLN  +T+FG VI      V++ + K  T   DRP   + I  +TI
Sbjct:   16 TATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGP---GYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITI 181          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CYP6_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp6 OS=Rhizopus oryzae GN=cyp6 PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 9.935e-25
Identity = 69/150 (46.00%), Postives = 92/150 (61.33%), Query Frame = 1
Query:   37 GDIKCEIACDEVPKTAENFLALCA-------SG---YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            G +  ++  D VPKTAENF ALC        SG   +Y  + FHR I GFM Q             SI+G+ F DE   +LKH  +G+LSMAN+GPNTNGSQFFI++   P L+G +TVFG+++ G +VLDL+E+  + SG  P A+I I
Sbjct:   21 GRMTFKLFSDTVPKTAENFRALCTGEKGKGISGKPLHYKNSYFHRIIPGFMAQGGDFTMGDGRGGESIYGRTFKDE-NFTLKHKGKGLLSMANAGPNTNGSQFFITFVDTPWLDGNHTVFGQIVDGSKVLDLLEQHGSRSG-MPSAKIEI 168          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: SDC10_BOVIN (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Bos taurus GN=SDCCAG10 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.695e-24
Identity = 60/157 (38.22%), Postives = 83/157 (52.87%), Query Frame = 1
Query:   16 VTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGD--RPLAEIRINRVTIHANP 480
            V L T  GDI  E+   E PK   NF+ LC   YYD TIFHR + GF++Q            SI+G  F DE    L+ N RG+++MAN+GP+ NGSQFF +  +   LN  +T+FG+V  G  V +++   +    D  RP    +I    +  NP
Sbjct:   15 VLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTGTGGESIYGVPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTVYNMLRLTEVDIDDEERPRNSHKIRSCEVLFNP 170          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_MYCLE (Probable peptidyl-prolyl cis-trans isomerase A OS=Mycobacterium leprae GN=ppiA PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.775e-24
Identity = 68/169 (40.24%), Postives = 90/169 (53.25%), Query Frame = 1
Query:   13 SVTLHTNLGDIKCEIACDEVPKTAENFLALC----------ASG-----YYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVI--HGFEVLDLMEKAQTGSGDRPLAEIRINRVTI 468
            + TLHTN GDIK  +  + VPKT  NF+ L           ASG     +YDG +FHR I+GFMIQ               G KF DE    L+ +   +L+MAN+GP TNGSQFFI+  + PHLN  +T+FG V      +V+D +    T   DRP   + I+ +TI
Sbjct:   16 TATLHTNRGDIKVALFGNHVPKTVANFVGLAQGTKEYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGP---GYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGETPHLNRRHTIFGEVTDPDSQKVVDAISTTATDGNDRPTEPVVIDSITI 181          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CYP1_BRUMA (Peptidyl-prolyl cis-trans isomerase 1 OS=Brugia malayi GN=CYP-1 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.775e-24
Identity = 70/161 (43.48%), Postives = 93/161 (57.76%), Query Frame = 1
Query:   10 MSVTLHTNL-GDIKCEIACDEVPKTAENFLALCA--------SG---YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            + VT+  NL G I  E+  D  P+T  NFL LC         SG   +Y G+ FHR IK FMIQ             SI+G  F+DE    +KH+   ++SMAN GPNTNGSQFFI+    PHLN ++ VFG+V+ G EV+  +E  +T S +RPLA++ I
Sbjct:   11 LDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGDGTGGESIYGGMFDDE-EFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLKTNSKNRPLADVVI 170          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CP20B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-2, chloroplastic OS=Arabidopsis thaliana GN=CYP20-2 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.775e-24
Identity = 64/134 (47.76%), Postives = 83/134 (61.94%), Query Frame = 1
Query:   64 DEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            D+VP+T ENF ALC    G+ Y G+ FHR I+ FMIQ             S++G+ F DE    L H   G+LSMAN+GPNTNGSQFFI   K   L+G + VFG+VI G EV+ L+E+ +T  GDRP  ++ I
Sbjct:  116 DDVPQTVENFRALCTGEKGFGYKGSTFHRVIRDFMIQGGDFEKGNGTGGKSVYGRTFKDE-NFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQVIEGMEVVKLIEEQETDRGDRPRKKVVI 248          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIB_ASPFU (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus fumigatus GN=cpr2 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.931e-24
Identity = 65/144 (45.14%), Postives = 87/144 (60.42%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            LG I   +    VPKTAENF AL     G+ Y+G+ FHR IK FMIQ             SI+G+KF DE    L+H  +G+LSMAN+G +TNGSQFFI+    P L+G + VFG V+ G+EV++ +E    G GD+P   ++I
Sbjct:   49 LGRIVLGLYGKTVPKTAENFRALATGEKGFGYEGSTFHRVIKSFMIQGGDFTRGDGTGGKSIYGEKFADE-NFKLRHTRKGLLSMANAGKDTNGSQFFITTVPTPWLDGRHVVFGEVLEGYEVVEQIENVPKGPGDKPAETVKI 191          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIB_SCHPO (Peptidyl-prolyl cis-trans isomerase B OS=Schizosaccharomyces pombe GN=cyp4 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.410e-24
Identity = 63/144 (43.75%), Postives = 89/144 (61.81%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            LG +   +    VPKTAENF AL     G+ Y+G+IFHR I  FMIQ             SI+G +F DE    L H   G+LSMAN+GP++NGSQFFI+  K P L+G + VFG V+ G++++  + KA+T + D+PL +++I
Sbjct:   40 LGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRVIPNFMIQGGDITKGDGTGGKSIYGSRFPDE-NFKLSHQRPGLLSMANAGPDSNGSQFFITTVKTPWLDGHHVVFGEVLSGYDIVKKISKAETDNRDKPLEDVKI 182          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CYP8_CAEEL (Peptidyl-prolyl cis-trans isomerase 8 OS=Caenorhabditis elegans GN=cyn-8 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.410e-24
Identity = 61/137 (44.53%), Postives = 82/137 (59.85%), Query Frame = 1
Query:   73 PKTAENFLALCAS---------GYYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            P+T ENF A C             Y G++FHR IKGFMIQ             SI+G+ F+DE   +LKH    +LSMAN GP+TNGSQFFI+  + PHL+G + VFG VI G EV+  +E  +TG+ D+P+ ++ I
Sbjct:   35 PRTVENFRAFCTGELGKMNGHYASYQGSVFHRVIKGFMIQGGDITHGNGTGGYSIYGRTFDDE-NLALKHKKPYLLSMANRGPDTNGSQFFITSEEVPHLDGKHCVFGEVIKGVEVVKAIENLETGNEDKPVCKVEI 170          
The following BLAST results are available for this feature:
BLAST of CN185473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
PPIA_MYCTU9.935e-2540.83Probable peptidyl-prolyl cis-trans isomerase A OS=... [more]
PPIA_MYCBO9.935e-2540.83Probable peptidyl-prolyl cis-trans isomerase A OS=... [more]
CYP6_RHIOR9.935e-2546.00Peptidyl-prolyl cis-trans isomerase cyp6 OS=Rhizop... [more]
SDC10_BOVIN1.695e-2438.22Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Bo... [more]
PPIA_MYCLE3.775e-2440.24Probable peptidyl-prolyl cis-trans isomerase A OS=... [more]
CYP1_BRUMA3.775e-2443.48Peptidyl-prolyl cis-trans isomerase 1 OS=Brugia ma... [more]
CP20B_ARATH3.775e-2447.76Peptidyl-prolyl cis-trans isomerase CYP20-2, chlor... [more]
PPIB_ASPFU4.931e-2445.14Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIB_SCHPO8.410e-2443.75Peptidyl-prolyl cis-trans isomerase B OS=Schizosac... [more]
CYP8_CAEEL8.410e-2444.53Peptidyl-prolyl cis-trans isomerase 8 OS=Caenorhab... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001G07_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185473 ID=CN185473; Name=CN185473; organism=Citrus sinensis; type=EST; length=688bp
AGGGGTAAGATGTCGGTAACTCTACACACTAATCTGGGTGATATTAAGTG
CGAGATTGCTTGCGACGAAGTCCCTAAGACGGCTGAGAATTTTTTGGCAC
TATGCGCGAGTGGTTACTACGATGGGACCATTTTTCACCGGAATATTAAA
GGTTTTATGATTCAAGGTGGAGACCCAACAGGCACTGGAAAAGGCGGAAC
AAGCATATGGGGCAAGAAGTTCAATGATGAGATAAGGGAGTCCCTCAAGC
ATAATGCTAGAGGGATACTGTCAATGGCCAATAGTGGCCCTAACACTAAT
GGAAGCCAATTCTTCATCTCTTATGCAAAGCAGCCCCATCTTAACGGATT
GTACACTGTGTTTGGTAGAGTAATTCATGGGTTCGAAGTTCTTGACCTTA
TGGAAAAGGCTCAAACTGGATCAGGGGACCGGCCACTTGCGGAGATAAGG
ATCAATCGAGTTACCATACATGCTAACCCACTTGCTGTCTAGCTTTGTCT
GAAAATTTCTTGTTGTATAACATTGTAAAGAGGCTTAGTGTGGAGTGGGA
ACAGTGACTTACGATTAAACTCCCAGTAGACTCTGTACATTTTTCTTTTC
CCAGTTATGACTATGGGCTTGAAGGAAGAAGTAACCGCAGAATTTTATGT
AGCATCAAATGGTGAGATTGACGATTGAGAAAAAAAAA
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