CN185386

Overview
NameCN185386
Unique NameCN185386
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length690
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6745 contig Csv1_Contig6745:1300..1989. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185386 vs. ExPASy Swiss-Prot
Match: ALDOB_SHEEP (Fructose-bisphosphate aldolase B OS=Ovis aries GN=ALDOB PE=2 SV=2)

HSP 1 Score: 290.041 bits (741), Expect = 7.745e-78
Identity = 149/227 (65.64%), Postives = 170/227 (74.89%), Query Frame = 3
Query:   12 GKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSE-APKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGK 689
            GK F D+LKE G++ GIK+D+G   LAGTN ETT QGLDGL++RC +Y + GA F KWRAVLKI    PS LAI ENAN LARYA I Q+NGLVPIVEPE++ DG HD+  C  VTE+VLAA YKALNDHHV LEGTLLKPNMVT G     K TP+ +A  TV AL RT+PAAVP + FLSGG SEE+AT NLNA+N     KPW LSFS+GRALQ S L AW GK
Sbjct:   91 GKLFRDILKEKGIVVGIKLDQGVAPLAGTNKETTVQGLDGLSERCAQYKKDGADFGKWRAVLKIDNQCPSHLAIQENANTLARYASIYQQNGLVPIVEPEVIPDGSHDMEHCQYVTEKVLAAVYKALNDHHVYLEGTLLKPNMVTAGHACTKKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGK 317          
BLAST of CN185386 vs. ExPASy Swiss-Prot
Match: ALDOB_RABIT (Fructose-bisphosphate aldolase B OS=Oryctolagus cuniculus GN=ALDOB PE=1 SV=3)

HSP 1 Score: 289.656 bits (740), Expect = 1.012e-77
Identity = 147/227 (64.76%), Postives = 170/227 (74.89%), Query Frame = 3
Query:   12 GKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSE-APKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGK 689
            GK F ++LKE G++ GIK+D+G   LAGTN ETT QGLDGL++RC +Y + G  F KWRAVL+I    PS LAI ENAN LARYA ICQ+NGLVPIVEPE++ DG HD+  C  VTE+VLAA YKALNDHHV LEGTLLKPNMVT G     K TP+ +A  TV AL RT+PAAVP + FLSGG SEE+AT NLNA+N     KPW LSFS+GRALQ S L AW GK
Sbjct:   91 GKLFRNILKEKGIVVGIKLDQGGAPLAGTNKETTIQGLDGLSERCAQYKKDGVDFGKWRAVLRIADQCPSSLAIQENANTLARYASICQQNGLVPIVEPEVIPDGDHDLEHCQYVTEKVLAAVYKALNDHHVYLEGTLLKPNMVTAGHACTKKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGK 317          
BLAST of CN185386 vs. ExPASy Swiss-Prot
Match: ALDOB_MOUSE (Fructose-bisphosphate aldolase B OS=Mus musculus GN=Aldob PE=1 SV=3)

HSP 1 Score: 288.115 bits (736), Expect = 2.943e-77
Identity = 146/227 (64.32%), Postives = 170/227 (74.89%), Query Frame = 3
Query:   12 GKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSE-APKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGK 689
            G  F +VLKE G++ GIK+D+G   LAGTN ETT QGLDGL++RC +Y + G  F KWRAVL+I    PS LAI ENAN LARYA ICQ+NGLVPIVEPE+L DG HD+  C  V+E+VLAA YKALNDHHV LEGTLLKPNMVT G     K TP+ +A  TV AL RT+PAAVP + FLSGG SEE+AT NLNA+N+    +PW LSFS+GRALQ S L AW GK
Sbjct:   91 GNLFRNVLKEKGIVVGIKLDQGGAPLAGTNKETTIQGLDGLSERCAQYKKDGVDFGKWRAVLRIADQCPSSLAIQENANALARYASICQQNGLVPIVEPEVLPDGDHDLEHCQYVSEKVLAAVYKALNDHHVYLEGTLLKPNMVTAGHACTKKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINRCPLPRPWKLSFSYGRALQASALAAWGGK 317          
BLAST of CN185386 vs. ExPASy Swiss-Prot
Match: ALF_DROME (Fructose-bisphosphate aldolase OS=Drosophila melanogaster GN=Ald PE=1 SV=5)

HSP 1 Score: 286.574 bits (732), Expect = 8.563e-77
Identity = 145/226 (64.16%), Postives = 172/226 (76.11%), Query Frame = 3
Query:   12 GKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAPKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGK 689
            G PF ++LK+ G++ GIKVDKG V L G+  E TTQGLD LA RC +Y + G  FAKWR VLKIG N PS  +I ENAN LARYA ICQ   +VPIVEPE+L DG HD+++   VTE VLAA YKAL+DHHV LEGTLLKPNMVT G  A K TP+ IA  TV+AL+RT+PAAV  V FLSGGQSEEEAT NL+A+N +   +PW+L+FS+GRALQ S L+AWAGK
Sbjct:   91 GTPFAEILKKKGIILGIKVDKGVVPLFGSEDEVTTQGLDDLAARCAQYKKDGCDFAKWRCVLKIGKNTPSYQSILENANVLARYASICQSQRIVPIVEPEVLPDGDHDLDRAQKVTETVLAAVYKALSDHHVYLEGTLLKPNMVTAGQSAKKNTPEEIALATVQALRRTVPAAVTGVTFLSGGQSEEEATVNLSAINNVPLIRPWALTFSYGRALQASVLRAWAGK 316          
BLAST of CN185386 vs. ExPASy Swiss-Prot
Match: ALDCA_DANRE (Fructose-bisphosphate aldolase C-A OS=Danio rerio GN=aldoca PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.118e-76
Identity = 144/227 (63.44%), Postives = 172/227 (75.77%), Query Frame = 3
Query:   12 GKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGK 689
            G PFV ++K+ G+  GIKVDKG V L GTNGET TQGLDGL++RC +Y + GA FAKWR V+KI    PS L I ENA  LARYA ICQ++G+VPIVEPEIL DG H++ +C  VTERVLAA YKA+ DHHV LEGTLLKPNMVTPG   P K + + +A  TV AL+RT+P AV  V FLSGGQSEEEA+ NL+A+N  +  KPW+L+FSFGRALQ S LK W G+
Sbjct:   91 GVPFVKMIKDKGITIGIKVDKGVVPLPGTNGETATQGLDGLSERCAQYKKDGADFAKWRCVMKISETTPSNLCITENAKVLARYASICQQHGIVPIVEPEILPDGDHNLKRCQFVTERVLAAVYKAMFDHHVYLEGTLLKPNMVTPGHGCPTKYSAEEVAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLSAINNCRLVKPWALTFSFGRALQASALKTWRGQ 317          
BLAST of CN185386 vs. ExPASy Swiss-Prot
Match: ALDOB_RAT (Fructose-bisphosphate aldolase B OS=Rattus norvegicus GN=Aldob PE=1 SV=2)

HSP 1 Score: 285.804 bits (730), Expect = 1.461e-76
Identity = 144/227 (63.44%), Postives = 171/227 (75.33%), Query Frame = 3
Query:   12 GKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSE-APKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGK 689
            GK F ++LKE G++ GIK+D+G   LAGTN ETT QGLDGL++RC +Y + G  F KWRAVL+I    PS LAI ENAN LARYA ICQ+NGLVPIVEPE+L DG HD+  C  V+E+VLAA YKALNDHHV LEGTLLKPNM+T G     K TP+ +A  TV AL RT+PAAVP++ FLSGG SEE+AT NLNA+ +    +PW LSFS+GRALQ S L AW GK
Sbjct:   91 GKLFRNILKEKGIVVGIKLDQGGAPLAGTNKETTIQGLDGLSERCAQYKKDGVDFGKWRAVLRISDQCPSSLAIQENANALARYASICQQNGLVPIVEPEVLPDGDHDLEHCQYVSEKVLAAVYKALNDHHVYLEGTLLKPNMLTAGHACTKKYTPEQVAMATVTALHRTVPAAVPSICFLSGGMSEEDATLNLNAIYRCPLPRPWKLSFSYGRALQASALAAWGGK 317          
BLAST of CN185386 vs. ExPASy Swiss-Prot
Match: ALF_SCHMA (Fructose-bisphosphate aldolase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 7.249e-76
Identity = 146/227 (64.32%), Postives = 167/227 (73.57%), Query Frame = 3
Query:   12 GKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAPKV-TPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGK 689
            GK    +L E  ++PGIKVDKG V LAGT+ ETTTQGLD LA RC +Y+  G RFAKWR VLKI  + PS LA+ ENAN LARYA ICQ+NGLVPIVEPE+L DG HD+     VTE+VLA  YKAL DHHV LEGTLLKPNMVT G    K  TP   A  TVRALQRT+P AVP + FLSGGQSE +AT+NLN +N++   KPW+L+FSFGRALQ S L  W GK
Sbjct:   91 GKTLPTLLAERNIIPGIKVDKGVVPLAGTDNETTTQGLDDLASRCAEYWRLGCRFAKWRCVLKISSHTPSYLAMLENANVLARYASICQQNGLVPIVEPEVLPDGDHDLLTAQRVTEQVLAFVYKALADHHVYLEGTLLKPNMVTAGQACKKAYTPQENALATVRALQRTVPPAVPGITFLSGGQSELDATKNLNEINKIPGPKPWALTFSFGRALQASVLATWKGK 317          
BLAST of CN185386 vs. ExPASy Swiss-Prot
Match: ALF2_CAEEL (Fructose-bisphosphate aldolase 2 OS=Caenorhabditis elegans GN=aldo-2 PE=1 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.157e-73
Identity = 142/227 (62.56%), Postives = 168/227 (74.01%), Query Frame = 3
Query:   12 GKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPG-SEAPKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGK 689
            G+ F D+L + G++PGIK+D G V LAGT GE TTQGLD LA+R   + + G  FAKWR VL IG + PS L + ENAN LARYA ICQ NGLVPIVEPE+L DG HD+ +   VTE+VLA  YKAL DHHV LEGTLLKPNMVTPG S A K + + I   TV AL+R +PAAVP + FLSGGQSE +AT NLNA+N ++  KPW L+FS+GRALQ S LKAW GK
Sbjct:   94 GEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGLDKLAERAAAFKKGGCGFAKWRCVLNIGTHTPSHLGMLENANVLARYASICQANGLVPIVEPEVLCDGEHDLARAQKVTEQVLAFVYKALADHHVYLEGTLLKPNMVTPGQSSASKASHEAIGLATVTALRRGVPAAVPGITFLSGGQSELDATANLNAINSVQLGKPWKLTFSYGRALQASVLKAWGGK 320          
BLAST of CN185386 vs. ExPASy Swiss-Prot
Match: ALF1_CAEEL (Fructose-bisphosphate aldolase 1 OS=Caenorhabditis elegans GN=aldo-1 PE=1 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.564e-70
Identity = 141/229 (61.57%), Postives = 166/229 (72.49%), Query Frame = 3
Query:   12 GKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGL-ARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAPKVTPDV--IAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGK 689
            GKPF  +L+E G++PGIKVDKG V +AGT GE TTQGLD L  RC +Y + GA+FAKWR V KI    PS  A+ E A+ L +RYA ICQ+NGLVPIVEPEIL DG H + +   +TE VL+  Y ALN+HHV LEGTLLKPNMVT G       P    I   TV ALQR +P+AVP VVFLSGGQSEE+AT NLNA+NQ+  KKPW+L+FS+GRALQ S L  WAGK
Sbjct:   91 GKPFTALLQEQGIIPGIKVDKGVVPMAGTIGEGTTQGLDDLNARCAQYKKDGAQFAKWRCVHKISSTTPSVTALKEIASNLGSRYASICQQNGLVPIVEPEILPDGEHCLARGQKITETVLSYVYHALNEHHVFLEGTLLKPNMVTSGQSFTGEKPSNADIGLATVTALQRGVPSAVPGVVFLSGGQSEEDATLNLNAINQVSGKKPWALTFSYGRALQASCLAKWAGK 319          
BLAST of CN185386 vs. ExPASy Swiss-Prot
Match: ALF2_PLABA (Fructose-bisphosphate aldolase 2 OS=Plasmodium berghei (strain Anka) GN=ALDO2 PE=3 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.324e-69
Identity = 138/230 (60.00%), Postives = 172/230 (74.78%), Query Frame = 3
Query:    9 AGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGP--NEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSE-APKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGK 689
            AG P V++L + G++PGIKVDKG V +  T+ E +TQGLDGLA+RC++YY+AGARFAKWRAVL I P   +P+ L+I E + GLARYA ICQ+N LVPIVEPEIL DG H I  CA VT++VLA+ +KAL+D+ VLLEG  LKPNMVT G +   K   D I   TVR L+RT+P A+P V FLSGGQSEE+A+ NLN++N L    PW+L+FS+GRALQ S L  W GK
Sbjct:   84 AGVPLVNLLHDEGIIPGIKVDKGLVSIPCTDDEKSTQGLDGLAERCKEYYKAGARFAKWRAVLVIDPAKGKPTDLSIQEVSWGLARYASICQQNKLVPIVEPEILADGAHTIEVCATVTQKVLASVFKALHDNGVLLEGASLKPNMVTAGYDCTEKTKTDDIGFFTVRTLRRTVPPALPGVAFLSGGQSEEDASINLNSINVL-GPHPWALTFSYGRALQASVLNTWQGK 312          
The following BLAST results are available for this feature:
BLAST of CN185386 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALDOB_SHEEP7.745e-7865.64Fructose-bisphosphate aldolase B OS=Ovis aries GN=... [more]
ALDOB_RABIT1.012e-7764.76Fructose-bisphosphate aldolase B OS=Oryctolagus cu... [more]
ALDOB_MOUSE2.943e-7764.32Fructose-bisphosphate aldolase B OS=Mus musculus G... [more]
ALF_DROME8.563e-7764.16Fructose-bisphosphate aldolase OS=Drosophila melan... [more]
ALDCA_DANRE1.118e-7663.44Fructose-bisphosphate aldolase C-A OS=Danio rerio ... [more]
ALDOB_RAT1.461e-7663.44Fructose-bisphosphate aldolase B OS=Rattus norvegi... [more]
ALF_SCHMA7.249e-7664.32Fructose-bisphosphate aldolase OS=Schistosoma mans... [more]
ALF2_CAEEL1.157e-7362.56Fructose-bisphosphate aldolase 2 OS=Caenorhabditis... [more]
ALF1_CAEEL1.564e-7061.57Fructose-bisphosphate aldolase 1 OS=Caenorhabditis... [more]
ALF2_PLABA1.324e-6960.00Fructose-bisphosphate aldolase 2 OS=Plasmodium ber... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0001E04_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185386 ID=CN185386; Name=CN185386; organism=Citrus sinensis; type=EST; length=690bp
AGGCTGCTGCTGGCAAGCCCTTTGTTGATGTCTTGAAGGAGGGTGGAGTC
CTCCCTGGAATTAAGGTTGACAAGGGTACTGTTGAGCTTGCTGGTACCAA
TGGTGAGACCACCACCCAGGGTCTTGATGGCCTCGCCCAGCGCTGCCAGA
AATACTATGAAGCTGGTGCTCGTTTTGCCAAATGGCGTGCTGTTCTTAAG
ATTGGCCCTAATGAGCCTTCGCAGCTGGCCATCAATGAGAATGCCAATGG
CCTGGCCCGATATGCTATCATCTGCCAGGAGAATGGCCTTGTTCCCATTG
TTGAACCTGAGATCCTTGTTGACGGTCCCCATGACATCAACAAGTGTGCT
GATGTGACCGAGCGTGTTCTTGCTGCATGCTACAAGGCTCTGAATGACCA
CCATGTCCTTCTTGAGGGTACCCTTTTGAAGCCCAACATGGTGACCCCTG
GATCTGAAGCTCCCAAAGTTACACCGGACGTGATTGCTGAACACACTGTC
CGGGCCCTGCAACGCACTATGCCTGCAGCAGTTCCTGCTGTTGTGTTCTT
GTCTGGTGGGCAGAGTGAGGAGGAGGCTACCCGCAACCTTAATGCCATGA
ACCAGCTCAAGACGAAGAAGCCATGGTCACTTTCCTTCTCCTTTGGACGT
GCACTTCAGCAGAGCACTCTCAAGGCATGGGCTGGAAAGG
back to top