CN185386

Overview
NameCN185386
Unique NameCN185386
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length690
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6745 contig Csv1_Contig6745:1300..1989. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185386 vs. ExPASy Swiss-Prot
Match: ALF1_XANAC (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas axonopodis pv. citri GN=XAC3344 PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.568e-62
Identity = 118/225 (52.44%), Postives = 159/225 (70.67%), Query Frame = 3
Query:   12 GKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEA-PKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA 683
            G PF + +   G++PGIKVDKG   LAG  GE  T+GLDGL  R ++YY  GARFAKWRAV+ IG + PS   I  N++ LARYA +CQE GLVP+VEPE+++DG HDI  C +VTE  L + + AL + +V+LEGT+LK +MV  G     + + + +AE TV  L+ T+PA +P +VFLSGGQ++E++T +LN M+QL    PW LSFS+GRA+QQ+ LK WA
Sbjct:   80 GVPFAEYMTAHGIIPGIKVDKGAQPLAGMPGELVTEGLDGLRARLEEYYTLGARFAKWRAVINIGEDIPSGTCIEANSHALARYAALCQEQGLVPMVEPEVIMDGSHDIETCYEVTEATLRSLFGALYEQNVVLEGTILKASMVISGKSCEEQASIEEVAESTVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQL-GNLPWPLSFSYGRAMQQAALKLWA 303          
BLAST of CN185386 vs. ExPASy Swiss-Prot
Match: ALF1_XANCP (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas campestris pv. campestris GN=XCC3185 PE=3 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.048e-62
Identity = 118/225 (52.44%), Postives = 159/225 (70.67%), Query Frame = 3
Query:   12 GKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEA-PKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA 683
            G PF   + + G++PGIKVDKG   LAG  GE  T+GLDGL  R ++YY  GARFAKWRAV+ IG + PS   I  NA+ LARYA +CQE GLVP+VEPE+++DG HDI  C +VTE  L + + AL + +V+LEGT+LK +MV  G     + + + +AE TV  L+ T+PA +P +VFLSGGQ++E++T +LN M+QL    PW LSFS+GRA+QQ+ LK W+
Sbjct:   80 GVPFAKYMADHGIIPGIKVDKGAQPLAGMPGELVTEGLDGLRARLEEYYTLGARFAKWRAVINIGEDIPSGTCIEANAHALARYAALCQEQGLVPMVEPEVIMDGDHDIETCYEVTEATLRSLFGALYEQNVVLEGTILKASMVISGKGCEEQASVEEVAESTVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQL-GNLPWPLSFSYGRAMQQAALKLWS 303          
BLAST of CN185386 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 226.098 bits (575), Expect = 1.373e-58
Identity = 122/224 (54.46%), Postives = 157/224 (70.09%), Query Frame = 3
Query:   12 GKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGS-EAPKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAW 680
            GK  VDVL E G++PGIKVDKG + L G+N E+  QGLDGLA R   YY+ GARFAKWR V+ I PN PS LA+ E A GLARYA I Q+NGL PI+EPEI++DG H I++   V ++V A  +  L +++VLLEG+ LKP+MV PG+  A K  P+ +A++ ++ L R     VP ++ LSGGQSE EAT NLNAMNQ  +  PW +SFS+ RALQ + LK W
Sbjct:  127 GKKMVDVLIEQGIVPGIKVDKGWLPLPGSNDESWCQGLDGLACRSAAYYQQGARFAKWRTVVSI-PNGPSALAVKEAAWGLARYAAITQDNGLDPILEPEIMLDGEHGIDRTFRVAQQVWAEVFFNLAENNVLLEGSSLKPSMVGPGALSARKGPPEQVADYPLKLLHRRRGPVVPGIMVLSGGQSEVEATLNLNAMNQ--SPNPWHVSFSYARALQNTCLKTW 347          
BLAST of CN185386 vs. ExPASy Swiss-Prot
Match: ALF_TRYBB (Fructose-bisphosphate aldolase, glycosomal OS=Trypanosoma brucei brucei GN=ALD PE=1 SV=2)

HSP 1 Score: 216.083 bits (549), Expect = 1.421e-55
Identity = 115/231 (49.78%), Postives = 144/231 (62.34%), Query Frame = 3
Query:    3 AAAGKPFVDVLKEGGVLPGIKVDKGTVELA-GTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGK 689
            A  G+ F   L+  GV+PGIK D G   L  G  GE  T GLDG  +R +KYY  G RF KWR V KI     S+  +  NA  LARYAI+ Q  GLVPIVEPE+++DG HDI  C  V++ V +    AL+ H V+ EG LLKPNMV PG+E+  K   + +AE+TV+ L R +P A+P V FLSGG SE  A+  LNAMN     +PW L+FS+ RALQ S +K W GK
Sbjct:   97 AKTGETFPQYLRRRGVVPGIKTDCGLEPLVEGAKGEQMTAGLDGYIKRAKKYYAMGCRFCKWRNVYKIQNGTVSEAVVRFNAETLARYAILSQLCGLVPIVEPEVMIDGTHDIETCQRVSQHVWSEVVSALHRHGVVWEGCLLKPNMVVPGAESGLKGHAEQVAEYTVKTLARVIPPALPGVTFLSGGLSEVMASEYLNAMNNCPLPRPWKLTFSYARALQSSAIKRWGGK 327          
BLAST of CN185386 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.019e-53
Identity = 118/226 (52.21%), Postives = 154/226 (68.14%), Query Frame = 3
Query:    6 AAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAW 680
            A+GK FVDV+KE  ++PGIKVDKG V    T   +   GLDG     + YY+AGARFAKWR+V+ I P+ PS + +   A GLARYA I Q  GLVPIVEPE+L+DG HDI++C +V E + A  +K + D+ V+L+G LLKP MVTPG++   K  P  +AE+T++ L    P  VP ++FLSGGQSE E+T NLNAMNQ  +  PW +SFS+ RAL  + LK W
Sbjct:  106 ASGKKFVDVMKEQNIVPGIKVDKGLVPCP-TPTMSWCMGLDGWTSAAE-YYKAGARFAKWRSVVSI-PHGPS-IMLPRLAYGLARYAAIAQNAGLVPIVEPEVLLDGEHDIDRCLEVQEAIWAETFKYMADNKVMLQGILLKPAMVTPGADCKNKAGPAKVAEYTLKMLAARAP-PVPGIMFLSGGQSELESTLNLNAMNQ--SPNPWHVSFSYARALTNTVLKTW 324          
BLAST of CN185386 vs. ExPASy Swiss-Prot
Match: ALF_ENCCU (Fructose-bisphosphate aldolase OS=Encephalitozoon cuniculi GN=ECU01_0240 PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.643e-45
Identity = 97/229 (42.36%), Postives = 138/229 (60.26%), Query Frame = 3
Query:    3 AAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGS-EAPKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAG 686
            + +G P  ++LK+ G+  GIK+DKG ++      E  + GL+ L  RC+      A FAKWR++       PS+  INEN + LA+YAIICQ+NGLVPIVEPE+ ++G + + +  +VT ++L+   K LN   V + G L+K + VT G     K TP  +A  T+RAL  T+P  +P +VFLSGG   E+A   LNA+N  +  + WSLSFSF RAL    L+ W G
Sbjct:   81 SGSGVPLTELLKKKGIEIGIKLDKGLIDYK--EKEKISVGLEDLDLRCKSSAFKDATFAKWRSLFYFYDGIPSEDCINENCSILAKYAIICQKNGLVPIVEPEVFLEGDYSMKRSYEVTRQILSTLMKYLNYELVYIPGVLIKASYVTSGQLSNEKYTPKKVATFTLRALLSTIPCGIPGIVFLSGGHGSEDAIGFLNAINMERGCRTWSLSFSFARALTDGVLETWRG 307          
BLAST of CN185386 vs. ExPASy Swiss-Prot
Match: ALF_LYMST (Fructose-bisphosphate aldolase (Fragment) OS=Lymnaea stagnalis PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.285e-29
Identity = 65/98 (66.33%), Postives = 75/98 (76.53%), Query Frame = 3
Query:  399 HHVLLEGTLLKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGK 689
            H++ LEGTLLKPNMVT G   PK  TP+ IA  TV AL RT+PAAV  + FLSGGQSEE+AT NLNA+NQ   +KPW L+FS+GRALQ S LKAW GK
Sbjct:    1 HNMFLEGTLLKPNMVTAGQGCPKKYTPEDIARATVTALNRTVPAAVAGITFLSGGQSEEDATINLNAINQFPGRKPWPLTFSYGRALQASVLKAWGGK 98          
BLAST of CN185386 vs. ExPASy Swiss-Prot
Match: ALDOC_CHICK (Fructose-bisphosphate aldolase C (Fragment) OS=Gallus gallus GN=ALDOC PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.213e-24
Identity = 57/90 (63.33%), Postives = 68/90 (75.56%), Query Frame = 3
Query:  423 LLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGK 689
            LLKPNMVTPG   P K +P+ IA  TV AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N     +PW+L+FS+GRALQ S L AW G+
Sbjct:    1 LLKPNMVTPGHSCPTKYSPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASINLNAINTCPLVRPWALTFSYGRALQASALSAWRGQ 90          
The following BLAST results are available for this feature:
BLAST of CN185386 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALF1_XANAC1.568e-6252.44Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XANCP2.048e-6252.44Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALFC_SPIOL1.373e-5854.46Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALF_TRYBB1.421e-5549.78Fructose-bisphosphate aldolase, glycosomal OS=Tryp... [more]
ALFC_CHLRE1.019e-5352.21Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]
ALF_ENCCU8.643e-4542.36Fructose-bisphosphate aldolase OS=Encephalitozoon ... [more]
ALF_LYMST2.285e-2966.33Fructose-bisphosphate aldolase (Fragment) OS=Lymna... [more]
ALDOC_CHICK2.213e-2463.33Fructose-bisphosphate aldolase C (Fragment) OS=Gal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001E04_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185386 ID=CN185386; Name=CN185386; organism=Citrus sinensis; type=EST; length=690bp
AGGCTGCTGCTGGCAAGCCCTTTGTTGATGTCTTGAAGGAGGGTGGAGTC
CTCCCTGGAATTAAGGTTGACAAGGGTACTGTTGAGCTTGCTGGTACCAA
TGGTGAGACCACCACCCAGGGTCTTGATGGCCTCGCCCAGCGCTGCCAGA
AATACTATGAAGCTGGTGCTCGTTTTGCCAAATGGCGTGCTGTTCTTAAG
ATTGGCCCTAATGAGCCTTCGCAGCTGGCCATCAATGAGAATGCCAATGG
CCTGGCCCGATATGCTATCATCTGCCAGGAGAATGGCCTTGTTCCCATTG
TTGAACCTGAGATCCTTGTTGACGGTCCCCATGACATCAACAAGTGTGCT
GATGTGACCGAGCGTGTTCTTGCTGCATGCTACAAGGCTCTGAATGACCA
CCATGTCCTTCTTGAGGGTACCCTTTTGAAGCCCAACATGGTGACCCCTG
GATCTGAAGCTCCCAAAGTTACACCGGACGTGATTGCTGAACACACTGTC
CGGGCCCTGCAACGCACTATGCCTGCAGCAGTTCCTGCTGTTGTGTTCTT
GTCTGGTGGGCAGAGTGAGGAGGAGGCTACCCGCAACCTTAATGCCATGA
ACCAGCTCAAGACGAAGAAGCCATGGTCACTTTCCTTCTCCTTTGGACGT
GCACTTCAGCAGAGCACTCTCAAGGCATGGGCTGGAAAGG
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