CN189120

Overview
NameCN189120
Unique NameCN189120
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length730
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6120 contig Csv1_Contig6120:949..1678. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: C85A3_SOLLC (Cytochrome P450 85A3 OS=Solanum lycopersicum GN=CYP85A3 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.440e-16
Identity = 51/193 (26.42%), Postives = 100/193 (51.81%), Query Frame = 1
Query:   58 QEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEE---LDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWAPAKGVK 627
            +  Y LSD+ +I  +  ++ +G +T + T   A+  L  +P+  ++ ++E   + +       +   DF+ + + + V+ E++RL      +L  K   D++++GY +PKG  ++V    +  DP  + +P  F P R+LE ++D   H    L FG G R+CPG +LG+  +++ L + +  + W    G K
Sbjct:  259 KNRYTLSDEELIDQIITIMYSGFETVSTTSMMAVKYLHDHPKALEEIRKEHFAIREKKSLEDPIDYNDFKAMRFTRAVIYETLRLATIVNGVL-RKTTQDMELNGYMIPKGWRIYVYTRELNYDPLIYPDPYTFNPWRWLENNLD---HQSSFLMFGGGTRLCPGKELGVAEISTFLHYFVTRYRWEEVGGNK 447          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: C5144_DICDI (Probable cytochrome P450 514A4 OS=Dictyostelium discoideum GN=cyp514a4 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.440e-16
Identity = 60/199 (30.15%), Postives = 102/199 (51.26%), Query Frame = 1
Query:   82 DTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEEL---DQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADW-KNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWAPAKGVKPEE--IDMAGNPG 660
            D+I+  + ++I A +D+T+      + +LI  P +Q K  EE+   D+    N + + AD     Y+  V+ ES R +   P+  P+K   DV+++GY + KG+++  N+         W ++ LEF+PERF  + ++ KG    L  FG+G R CPG +   +   + L  +L +F     K V P +  ID+ G  G
Sbjct:  298 DSILFSISDIIFAAVDSTSNGFSLLIGQLINKPEIQDKIYEEIMRNDENNNTNNI-SFADHTKYPYIISVMNESYRYNSSVPITEPNKTTEDVEVNGYKIAKGTMIIKNLRGTHLSKEFWGEDALEFKPERFKNQPLNQKG----LFHFGAGARACPGGRFTESFTFTFLVIMLKNF-----KIVNPTDIPIDVEGEVG 486          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: C12C1_DROME (Probable cytochrome P450 12c1, mitochondrial OS=Drosophila melanogaster GN=Cyp12c1 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.440e-16
Identity = 58/192 (30.21%), Postives = 97/192 (50.52%), Query Frame = 1
Query:   55 LQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEE-LDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKG--------HDYRLLPFGSGRRICPG---IQLGINLVTSMLGHLLH 594
            L++  ++     + +  +M++ G+DTT+  +   +  L KNP  QQ+ +EE L ++   +   T  D ++L YL+ V+KES+RL+P T       A ADV + GY +PKG+ + +    + +D   +    EF PER+L    D K         + +  LPFG G R+C G   + L + L  + L    H
Sbjct:  302 LEQLLQIDRKLAVVMAMDMLMGGVDTTSTAISGILLNLAKNPEKQQRLREEVLSKLTSLHSEFTVEDMKSLPYLRAVIKESLRLYPVT-FGNARSAGADVVLDGYRIPKGTKLLMTNSFLLKDDRLYPRAKEFIPERWLRRKDDDKSDVLMNKDLNAFIYLPFGFGPRMCVGKRIVDLEMELTVANLVRNFH 492          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: C11B2_HUMAN (Cytochrome P450 11B2, mitochondrial OS=Homo sapiens GN=CYP11B2 PE=1 SV=3)

HSP 1 Score: 86.6557 bits (213), Expect = 1.440e-16
Identity = 55/190 (28.95%), Postives = 96/190 (50.53%), Query Frame = 1
Query:   31 HFVDALLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHF 600
            H+   +  L  + ELS + I      +    +DTT   +   + EL +NP VQQ  ++E            +     L  L+  +KE++RL+P   L L    ++D+ +  Y++P G++V V ++++GR+ A +  P  + P+R+L  DI   G ++  +PFG G R C G +L    +  +L H+L HF
Sbjct:  285 HYTGIVAELLLKAELSLEAIKANSMELTAGSVDTTAFPLLMTLFELARNPDVQQILRQESLAAAASISEHPQKATTELPLLRAALKETLRLYP-VGLFLERVVSSDLVLQNYHIPAGTLVQVFLYSLGRNAALFPRPERYNPQRWL--DIRGSGRNFHHVPFGFGMRQCLGRRLAEAEMLLLLHHVLKHF 471          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: CP4F5_RAT (Cytochrome P450 4F5 OS=Rattus norvegicus GN=Cyp4f5 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.881e-16
Identity = 54/181 (29.83%), Postives = 92/181 (50.83%), Query Frame = 1
Query:   34 FVDALLNLQEEY--ELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVG---PNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGIN 561
            F+D LL  ++E+  ELSD+ I       +  G DTT   + W +  L ++P  Q++ ++E+ +++    P  +  + D   L +L   +KES+RLHPP   +L       V   G  +PKG++  ++++ I  +P+ W +P  F P RF  E+   K      +PF +G R C G    +N
Sbjct:  300 FIDVLLLAKDEHGKELSDEDIRAEADTFMFGGHDTTASALSWILYNLARHPEYQERCRQEVWELLRDREPEEIEWD-DLAQLPFLTMCIKESLRLHPPAIDLLRRCTQDIVLPDGRVIPKGNICVISIFGIHHNPSVWPDPEVFDPFRFDSEN-RQKRSPLSFIPFSAGPRNCIGQTFAMN 478          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: CP4A7_RABIT (Cytochrome P450 4A7 OS=Oryctolagus cuniculus GN=CYP4A7 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.881e-16
Identity = 49/178 (27.53%), Postives = 83/178 (46.63%), Query Frame = 1
Query:   34 FVDALL--NLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGIN 561
            F+D LL   ++    LSD  +   +   +  G DTT   + W    L  +P  Q + +EE+  ++G    +T      + Y    +KE++RL+PP P +    ++      G ++PKG ++ ++++ +  +P  W NP  F P RF         H +  LPF  G R C G Q  +N
Sbjct:  292 FLDVLLFAKMENGSSLSDQDLRAEVDTFMFEGHDTTASGISWIFYALATHPEHQHRCREEIQGLLGDGASITWEHLDKMPYTTMCIKEALRLYPPVPGVGSKLSSPVTFPDGRSLPKGIIITLSIYGLHHNPKVWPNPEVFDPSRFAP---GSARHSHAFLPFSGGSRNCIGKQFAMN 466          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: CP1A2_CHICK (Cytochrome P450 1A2 (Fragment) OS=Gallus gallus GN=CYP1A2 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.881e-16
Identity = 43/134 (32.09%), Postives = 71/134 (52.99%), Query Frame = 1
Query:   79 DDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQE-ELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEED 477
            ++ II L+ ++  AG DT T  + W++  L+  P  Q+K QE ELD  +G  R    ++   L Y +  + E++      P  +PH    D  ++G+++PK   V VN W +  +   W++P  FR ERFL +D
Sbjct:   41 NEKIINLVNDIFGAGFDTVTTALSWSLMYLVTQPHSQKKIQESELDTAIGRERRSWLSERSMLPYKEAFILETVPTWQFVPFTIPHSTTRDTTLNGFHIPKECCVFVNQWQVNHEAELWEDPFVFRTERFLTDD 174          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: CP11A_BOVIN (Cholesterol side-chain cleavage enzyme, mitochondrial OS=Bos taurus GN=CYP11A1 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.881e-16
Identity = 58/186 (31.18%), Postives = 103/186 (55.38%), Query Frame = 1
Query:   55 LQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADF----QNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHF 600
            L+ E  L +D    +   M+  G++TT++T++W + E+ ++  VQ+  +EE+       R   E D     Q +  L+  +KE++RLHP + + L     +D+ +  Y +P  ++V V ++A+GRDPA + +P +F P R+L +D D+    +R L FG G R C G ++    +T  L H+L +F
Sbjct:  305 LKSEKMLLEDVKANIT-EMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREEVLNA----RRQAEGDISKMLQMVPLLKASIKETLRLHPIS-VTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFSSPDKFDPTRWLSKDKDL--IHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILENF 482          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: C90A1_ARATH (Cytochrome P450 90A1 OS=Arabidopsis thaliana GN=CYP90A1 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.881e-16
Identity = 58/205 (28.29%), Postives = 103/205 (50.24%), Query Frame = 1
Query:   13 GGAAKPHFVDALLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQV---VGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWAPAK 618
            G   K   + ALL   + +  SD+ I+  L  +++AG +TT+  +  A+  L + P    + +EE +++      +  +  +D++++ + QCVV E++R+      +   +A  DV+I GY +PKG  V  +  A+  DP  +K+   F P R+    +   G      PFG G R+CPG +L    ++  L  L+  F W PA+
Sbjct:  245 GAERKKDMLAALLAADDGF--SDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGVF-RRAMTDVEIKGYKIPKGWKVFSSFRAVHLDPNHFKDARTFNPWRWQSNSV-TTGPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTGFSWVPAE 445          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: CP6B5_PAPGL (Cytochrome P450 6B5 (Fragment) OS=Papilio glaucus GN=CYP6B5 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.457e-16
Identity = 59/185 (31.89%), Postives = 96/185 (51.89%), Query Frame = 1
Query:   70 ELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVV-GPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNV--PKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWAPA 615
            EL+D  I    +    AG +T+  T+ + + EL +NP +Q+K   E+D+ +   N  +T      + YL  V  E++R +P   ++L   A AD  + G NV   KG  V V+ + I  DP  + +P +F PERF  E++  + H    +PFG+G+R C G++ G   V   +  LL  F + P+
Sbjct:  287 ELTDSVIAAQTFIFYAAGYETSASTMSFLLFELAENPDIQEKVIAEVDETLKRHNGEITYDTLSEMTYLTQVFHETLRKYPVADILL-RNAKADYAVPGTNVTLKKGQTVVVSGFGIHYDPKYYPDPEKFDPERFSPENVRNR-HPCAYIPFGAGQRKCLGMRFGQWQVQVCIIKLLSKFRFEPS 469          
The following BLAST results are available for this feature:
BLAST of CN189120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
C85A3_SOLLC1.440e-1626.42Cytochrome P450 85A3 OS=Solanum lycopersicum GN=CY... [more]
C5144_DICDI1.440e-1630.15Probable cytochrome P450 514A4 OS=Dictyostelium di... [more]
C12C1_DROME1.440e-1630.21Probable cytochrome P450 12c1, mitochondrial OS=Dr... [more]
C11B2_HUMAN1.440e-1628.95Cytochrome P450 11B2, mitochondrial OS=Homo sapien... [more]
CP4F5_RAT1.881e-1629.83Cytochrome P450 4F5 OS=Rattus norvegicus GN=Cyp4f5... [more]
CP4A7_RABIT1.881e-1627.53Cytochrome P450 4A7 OS=Oryctolagus cuniculus GN=CY... [more]
CP1A2_CHICK1.881e-1632.09Cytochrome P450 1A2 (Fragment) OS=Gallus gallus GN... [more]
CP11A_BOVIN1.881e-1631.18Cholesterol side-chain cleavage enzyme, mitochondr... [more]
C90A1_ARATH1.881e-1628.29Cytochrome P450 90A1 OS=Arabidopsis thaliana GN=CY... [more]
CP6B5_PAPGL2.457e-1631.89Cytochrome P450 6B5 (Fragment) OS=Papilio glaucus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001F14_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001F14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189120 ID=CN189120; Name=CN189120; organism=Citrus sinensis; type=EST; length=730bp
CGTTAAAAGGGTGGAGGAGCTGCTAAGCCACACTTCGTTGATGCGTTGCT
CAATTTGCAAGAGGAATATGAACTTAGTGATGATACAATTATTGGGCTAC
TTTGGAACATGATAATAGCAGGCATGGACACCACAACAATAACTGTAGAA
TGGGCAATGGCAGAGCTCATAAAAAACCCTAGAGTGCAACAAAAAGCTCA
GGAAGAACTAGACCAAGTAGTAGGCCCTAATCGCGTCATGACAGAAGCAG
ACTTTCAAAACCTGCACTATCTCCAGTGCGTGGTCAAAGAATCAATGCGG
CTACACCCACCAACGCCTCTAATGCTGCCCCACAAAGCCAACGCCGATGT
AAAAATCAGCGGCTACAACGTCCCGAAAGGATCAGTCGTACATGTAAACG
TTTGGGCCATAGGCAGAGACCCTGCTGATTGGAAAAACCCGTTGGAATTT
AGGCCTGAGAGGTTCTTAGAGGAGGACATTGACATGAAAGGACACGATTA
TCGATTGTTACCATTTGGTTCGGGGAGAAGAATTTGTCCCGGCATACAAC
TTGGCATAAATTTAGTGACCTCGATGTTGGGTCATCTTTTGCACCATTTT
TGGTGGGCACCGGCTAAAGGAGTGAAGCCTGAGGAAATTGATATGGCCGG
GAACCCTGGACAGGTCACGTACATGACCACACCCCTTGAGGTTGTGGCTA
CCCCGCGGTTGGCTGATCATGGCCTGTACA
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