CN189115

Overview
NameCN189115
Unique NameCN189115
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length739
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12367 contig Csv1_Contig12367:25..764. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CN189115 vs. ExPASy Swiss-Prot
Match: ASPG1_DROSI (Putative N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase GD10667 OS=Drosophila simulans GN=GD10667 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.252e-11
Identity = 49/170 (28.82%), Postives = 77/170 (45.29%), Query Frame = 1 
Query:  250 GRGSALTENGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLARLVMEKSPHSYLAFSGAEEFARQQGVELFDNEYFITEENVGM-LKLAKEA------NSILFDYRIPNGGFETCSAGAAATDSPLQMNGLPISLYAPETVGCVVVDQEGRCAAATSTGGLMNKRTGRIG 738
            G G +  E G   ++A +MDG     GAV+GL  +K+ I +AR V+E + H+ L    A  FA   G   F++E  +T E+  M L+   E        ++  D ++  G ++               N   I     +T+G + +D E    A TST G  +K  GR+G
Sbjct:  107 GYGGSPDELGETTLDAMVMDGATMDVGAVAGLRRIKDAIKVARHVLEHTQHTMLVGDAASAFANAMG---FESESLVTPESKDMWLQWTAENCQPNFWKNVHPDPKVSCGPYKPRPTPLTRWKEDRARNEYEIGRKNHDTIGMIAIDVENNIHAGTSTNGARHKIPGRVG 273
[Close]
BLAST of CN189115 vs. ExPASy Swiss-Prot
Match: ASPG1_DROME (Putative N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase CG1827 OS=Drosophila melanogaster GN=CG1827 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.252e-11
Identity = 49/170 (28.82%), Postives = 77/170 (45.29%), Query Frame = 1 
Query:  250 GRGSALTENGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLARLVMEKSPHSYLAFSGAEEFARQQGVELFDNEYFITEENVGM-LKLAKEA------NSILFDYRIPNGGFETCSAGAAATDSPLQMNGLPISLYAPETVGCVVVDQEGRCAAATSTGGLMNKRTGRIG 738
            G G +  E G   ++A +MDG     GAV+GL  +K+ I +AR V+E + H+ L    A  FA   G   F++E  +T E+  M L+   E        ++  D ++  G ++               N   I     +T+G + +D E    A TST G  +K  GR+G
Sbjct:  107 GYGGSPDELGETTLDAMVMDGATMDVGAVAGLRRIKDAIKVARHVLEHTQHTMLVGDAASAFANAMG---FESESLVTPESKDMWLQWTAENCQPNFWKNVHPDPKVSCGPYKPRPTPLTRWKEDRARNEYEIGRKNHDTIGMIAIDVESNIHAGTSTNGARHKIPGRVG 273
The following BLAST results are available for this feature:
BLAST of CN189115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
ASPG1_DROSI9.252e-1128.82Putative N(4)-(beta-N-acetylglucosaminyl)-L-aspara... [more]
ASPG1_DROME9.252e-1128.82Putative N(4)-(beta-N-acetylglucosaminyl)-L-aspara... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001F12_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189115 ID=CN189115; Name=CN189115; organism=Citrus sinensis; type=EST; length=739bp
CAGACGAGGGGGCGAGAGCGCGTGAGCANAAGCAAAAACAACCGAAAGAA
AATGGGAAAATGGGCTATAGCGGTGCATGGTGGCGCTGGCGTGGACCCCA
ATCTTCCCGTGCAACGACAAGAGGCCGCCAAACAACTCCTCACTCGCTGC
CTTAATCTTGGCATCTCCGCTCTTCGCTCTAACTGCCCTGCTATCGACGT
CGTCGAACTCGTTGTGAGAGAACTGGAAACGGATCCTCTGTTCAACTCTG
GCCGTGGATCTGCACTTACGGAGAATGGAACGGTGGAGATGGAGGCGAGC
ATTATGGACGGGCCCAAGAGACGCTGCGGCGCCGTATCTGGGCTTACCAC
CGTTAAAAACCCTATATCTCTTGCGCGACTCGTCATGGAGAAATCTCCCC
ATTCATATCTCGCCTTCTCTGGGGCCGAGGAATTCGCCAGACAGCAGGGT
GTTGAGTTGTTCGACAATGAATACTTCATCACCGAAGAGAACGTGGGAAT
GTTAAAATTAGCCAAGGAAGCAAACTCAATCCTGTTTGATTACAGAATTC
CAAACGGGGGATTCGAAACCTGCAGCGCTGGAGCTGCAGCCACAGACAGC
CCCTTGCAAATGAACGGACTTCCAATAAGCCTGTACGCCCCAGAAACGGT
TGGGTGCGTTGTGGTTGACCAGGAGGGTCGGTGCGCTGCAGCCACGTCAA
CGGGAGGGCTGATGAATAAGAGGACCGGCAGAATCGGTG
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