CN188943
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: MAD33_ORYSJ (MADS-box transcription factor 33 OS=Oryza sativa subsp. japonica GN=MADS33 PE=2 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 9.837e-31 Identity = 75/173 (43.35%), Postives = 111/173 (64.16%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCTTSSMVKTLERYQ-KCNYGAPEPNVSAREALELTSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLGQR 531 M RG+V+++RIEN ++RQVTF KRR GLLKKA ELSVLCDA+V +IIFS++GKL+E T +M +ERYQ G EP R+ + ++Q L+ + LQR R+ G G + +L +LE+ L++ + QIR+T+ Q M + L++KE +L EAN+ L ++ Sbjct: 1 MVRGKVQMRRIENPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHELATNGNMHNLVERYQSNVAGGQMEPGALQRQQV---AEQGIFLLREEIDLLQRGLRSTYGGGAGEMTLDKLHALEKGLELWIYQIRTTKMQMMQQEIQFLRNKEGILKEANEMLQEK 170
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: AGL21_ARATH (Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana GN=AGL21 PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.678e-30 Identity = 74/177 (41.81%), Postives = 110/177 (62.15%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCTTSSMVKTLERYQKCNYGAPEPNVSAREALELTS-QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLGQRTMTL 543 MGRG++ ++RI++ +RQVTF+KRR GL+KKA EL++LCDAEV LIIFS+ GKLY+F +SSM ++RY K E A E+ Q+E L+ ALQ + R ++GE+L L+ EL SLE Q+++SL+ IR + Q + + EL K L+ + N L ++ + Sbjct: 1 MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDF-ASSSMKSVIDRYNKSKI---EQQQLLNPASEVKFWQREAAVLRQELHALQENHRQMMGEQLNGLSVNELNSLENQIEISLRGIRMRKEQLLTQEIQELSQKRNLIHQENLDLSRKVQRI 173
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: MAD25_ORYSJ (MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica GN=MADS25 PE=2 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 2.862e-30 Identity = 79/214 (36.92%), Postives = 127/214 (59.35%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCTTSSMVKTLERYQKCNYGAPEPNVSAREALELTS--QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLGQRTMTLRHAAFAGL--QLMEGYQVNTLQLNPSAEDCGYGLKP 645 MGRG++ +KRI+N +NRQVTF+KRR GL+KKA EL++LCDA+V LI+FS G+LY+F ++SSM +ERYQ+ A E + + Q+E L+ + + L + R LLGEE+ ++L+ L+ Q++MSL IR+ + Q + + + +L K L+ + N L ++ + H L +L G ++ Q+ S++D G P Sbjct: 1 MGRGKIAIKRIDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDF-SSSSMKSIIERYQE----AGEEHCRLLNPMSEAKFWQREVTTLRQQVQNLHHNNRQLLGEEISNFTVRDLQLLQNQVEMSLHSIRNKKDQLLAEEILKLNEKGSLVQKENSEL-RKKFNIAHQRNIELHKKLNSGESTSSEQVTRSSKDPGESSTP 208
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: M17_MAIZE (MADS-box protein ZMM17 OS=Zea mays GN=M17 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.862e-30 Identity = 75/185 (40.54%), Postives = 114/185 (61.62%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCTTS-SMVKTLERYQKC-NYGAPEPNVSAREALELTSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLGQRTMTLRHAAFAG 564 MGRG++E+KRIEN NRQVTF+KRR GLLKKA EL+VLCDA V ++IFS+ GK++E+C+ + S+ + +E+YQ N E N + LE+T ++K E L+ R G++L L ++ LE+QL+ S+ ++R+ + Q + L L+ KEQ+L + N L + + AA G Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPACSLRELIEQYQHATNSHFEEINHDQQILLEMT------RMKNEMEKLETGIRRYTGDDLSSLTLDDVSDLEQQLEYSVSKVRARKHQLLNQQLDNLRRKEQILEDQNTFLYRMINENQQAALTG 179
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: AGL15_ARATH (Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana GN=AGL15 PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.376e-30 Identity = 81/177 (45.76%), Postives = 112/177 (63.28%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCTTSSMVKTLERYQKCNYGAPEPNVSAREALELTSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLGQRTMTLR 546 MGRG++E+KRIEN +RQVTF+KRR+GLLKKA ELSVLCDAEVA+I+FS GKL+E+ +T M +TL RY + SA +A E ++ + LK + LQ L G+ L PL KEL+SLE+QL +L +R + + + + L E + KEQ N+TL ++ LR Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEYSST-GMKQTLSRY------GNHQSSSASKAEEDCAEVDI--LKDQLSKLQEKHLQLQGKGLNPLTFKELQSLEQQLYHALITVRERKERLLTNQLEESRLKEQRAELENETLRRQVQELR 168
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: MAD57_ORYSJ (MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica GN=MADS57 PE=2 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 1.420e-29 Identity = 72/172 (41.86%), Postives = 108/172 (62.79%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCTTSSMVKTLERYQKCNYGAPEPNVSAREALELTS-QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLGQ 528 MGRG++ ++RI+N +RQVTF+KRRNGLLKKA ELS+LCDAEV L++FS+ G+LYEF +T +M ++RY A E + E+ Q+E L+ + LQ S + L+GEEL L ++L+ LE +L++SL+ IR + + + EL K L+ + N L + Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSST-NMKTVIDRYT----NAKEELLGGNATSEIKIWQREAASLRQQLHNLQESHKQLMGEELSGLGVRDLQGLENRLEISLRNIRMRKDNLLKSEIEELHVKGSLIHQENIELSR 167
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: AGL17_ARATH (Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana GN=AGL17 PE=2 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 2.423e-29 Identity = 74/176 (42.05%), Postives = 108/176 (61.36%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCTTSSMVKTLERYQKCNYGAPEPNVSAREALELTSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLGQRTMTL 543 MGRG++ +++I++ +RQVTF+KRR GL+KKA EL++LCDAEV LIIFSN KLY+F +SS+ T+ER+ E A E Q+E L+ +LQ + R L G EL L+ KEL+++E QL+MSL+ IR R Q + + + EL K L+ N L ++ + Sbjct: 1 MGRGKIVIQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDF-ASSSVKSTIERFNTAKMEEQELMNPASEV--KFWQREAETLRQELHSLQENYRQLTGVELNGLSVKELQNIESQLEMSLRGIRMKREQILTNEIKELTRKRNLVHHENLELSRKVQRI 173
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSJ (MADS-box transcription factor 26 OS=Oryza sativa subsp. japonica GN=MADS26 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.398e-29 Identity = 70/173 (40.46%), Postives = 108/173 (62.43%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCTTSSMVKTLERYQKCNYGAPEPNVSAREALELTSQQEYLKLKARYEALQRSQRNLLGEELGP-LNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLGQR 531 M RG+V+L+RIEN ++RQVTF KRR GLLKKA ELS+LC+A++ +IIFS GKLY+ TT +M + +ERY+ + + N + ++ +QE + LK LQ+ R + G + +EL +LER L++ + IRS + Q M+ + L+ KE +L AN+ L ++ Sbjct: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYKSAS--GEQANACGDQRMD--PKQEAMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEK 169
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSI (MADS-box transcription factor 26 OS=Oryza sativa subsp. indica GN=MADS26 PE=2 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 5.398e-29 Identity = 70/173 (40.46%), Postives = 108/173 (62.43%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCTTSSMVKTLERYQKCNYGAPEPNVSAREALELTSQQEYLKLKARYEALQRSQRNLLGEELGP-LNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLGQR 531 M RG+V+L+RIEN ++RQVTF KRR GLLKKA ELS+LC+A++ +IIFS GKLY+ TT +M + +ERY+ + + N + ++ +QE + LK LQ+ R + G + +EL +LER L++ + IRS + Q M+ + L+ KE +L AN+ L ++ Sbjct: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYKSAS--GEQANACGDQRMD--PKQEAMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEK 169
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: MAD29_ORYSJ (MADS-box transcription factor 29 OS=Oryza sativa subsp. japonica GN=MADS29 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.050e-29 Identity = 73/185 (39.46%), Postives = 110/185 (59.46%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCT-TSSMVKTLERYQK-CNYGAPEPNVSAREALELTSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLGQRTMTLRHAAFAG 564 MGRG++E+KRIEN NRQVTF+KRR GLLKKA EL+VLCDA V ++IFS+ GK++E+C+ T S+ + +E YQ N E N + +E+T +++ E L R G++L L ++ LE+QL+ S+ ++R+ + Q + L L+ KE +L + N L + H A G Sbjct: 1 MGRGKIEIKRIENATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPTCSLRELIEHYQTVTNTHFEEINHDQQIFVEMT------RMRNEMEKLDGGIRRFTGDDLSNLTLADINDLEQQLEFSVTKVRARKHQLLNQQLDNLRRKEHILEDQNSFLCRMINENHHQAAVG 179 The following BLAST results are available for this feature:
BLAST of CN188943 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188943 ID=CN188943; Name=CN188943; organism=Citrus sinensis; type=EST; length=710bpback to top |