CN188943
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: FLC_ARATH (MADS-box protein FLOWERING LOCUS C OS=Arabidopsis thaliana GN=FLC PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.051e-28 Identity = 74/194 (38.14%), Postives = 113/194 (58.25%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCTTSSMVKTLERYQKCNYGAPEPNVSAREALELTSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLGQRTMTLRH-AAFAGLQLMEGYQVN 594 MGR ++E+KRIENK +RQVTF+KRRNGL++KA +LSVLCDA VAL++ S GKLY F + ++VK L+RY K + A + L Q + L + YE L+ L+G + ++ L LE L+ +L R+ +T+ ML + L+ KE++L E N+ L + H A A +++ Q++ Sbjct: 1 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSGDNLVKILDRYGKQH---------ADDLKALDHQSKALNYGSHYELLELVDSKLVGSNVKNVSIDALVQLEEHLETALSVTRAKKTELMLKLVENLKEKEKMLKEENQVLASQMENNHHVGAEAEMEMSPAGQIS 185
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: FBP24_PETHY (MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.679e-28 Identity = 74/175 (42.29%), Postives = 109/175 (62.29%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCT-TSSMVKTLERYQKCNYGAPEPNVSAREALELTSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLGQRTM 537 MGRG++E+KRIENK +RQVTF+KRR GLLKK +ELSVLCDA++ LIIFS++GKL+E+C+ SM + + RY + GA P R L E K++ LQ S + G++L +EL LE+QL+ +L +IR+ + + M + L+ E++L + N + Q M Sbjct: 4 MGRGKIEVKRIENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQPHSMSQIISRYLQTT-GASLPVEDNRVQL----YDEVAKMRRDTLNLQLSLQRYKGDDLSLAQYEELNELEKQLEHALNKIRARKLELMQQQMENLKKTEKMLEKENHDMYQWLM 173
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: DEF21_ANTMA (MADS-box protein defh21 OS=Antirrhinum majus GN=DEFH21 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.968e-28 Identity = 68/171 (39.77%), Postives = 108/171 (63.16%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCTTS-SMVKTLERYQKCNYGAPE-PNVSAREALELTSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTL 522 MGRG++E+KRIEN +RQVTF+KRR+GL+KK +ELSVLCDA++ LI+FS +GKL E+CT SM + ++RY K PE N + A +E ++K LQ + + G++L + +EL LE+ LD SL ++R+ + + + + + L+ E +L + N+ + Sbjct: 1 MGRGKIEVKRIENNTSRQVTFSKRRSGLMKKTHELSVLCDAQIGLIVFSTKGKLTEYCTPPFSMKQIIDRYVKAKGILPEMENRAGPHADNDQVIKELTRMKEETLNLQLNLQRYKGDDLSTVRFEELTELEKLLDQSLNKVRARKLELLHEQMENLKRTEFMLEKENQEM 171
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: SVP_ARATH (MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.329e-27 Identity = 69/172 (40.12%), Postives = 108/172 (62.79%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCTTSSMVKTLERYQKCNYGAPEPNVSAREALELTSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLGQR 531 M R ++++++I+N RQVTF+KRR GL KKA ELSVLCDA+VALIIFS+ GKL+EFC +SSM + LER+ + + + + E L+L ++ ++ R + GEEL L+ +EL+ LE+ L+ L ++ T++ ++ ++ELQ K L + NK L Q+ Sbjct: 1 MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFC-SSSMKEVLERHNLQSKNLEKLDQPSLE-LQLVENSDHARMSKEIADKSHRLRQMRGEELQGLDIEELQQLEKALETGLTRVIETKSDKIMSEISELQKKGMQLMDENKRLRQQ 170
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: JOIN_SOLLC (MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.470e-26 Identity = 70/176 (39.77%), Postives = 105/176 (59.66%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCTTSSMVKTLERYQKCNYGAPEPNVSAREALELTSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLGQRTMTL 543 M R ++++K+I+N RQVTF+KRR GL KKA ELSVLCDA+VALIIFS+ GKL+++ ++SSM + LER + + + + E L+L Y +L R + GEEL LN +EL+ LER L+ L ++ + ++ + +LQ K L E N+ L Q+ M + Sbjct: 1 MAREKIQIKKIDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDY-SSSSMKQILERRDLHSKNLEKLDQPSLE-LQLVENSNYSRLSKEISEKSHRLRQMRGEELQGLNIEELQQLERSLETGLSRVIERKGDKIMREINQLQQKGMHLMEENEKLRQQVMEI 174
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: MADS2_PETHY (Floral homeotic protein PMADS 2 OS=Petunia hybrida GN=PMADS2 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.507e-26 Identity = 73/188 (38.83%), Postives = 110/188 (58.51%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCTTS-SMVKTLERYQKCN----YGAPEPNVSAREALELTSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLGQRTMTLRHAAFAG 564 MGRG++E+KRIEN NRQVT++KRRNG++KKA E++VLCDA+V+LIIF N GK++E+C+ S ++ L+ YQK + + A N+S E ++K + +Q R+L GE++ LN KEL LE L L I + ++ + L ++ +Q+L E +K L AA G Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAKVSLIIFGNSGKMHEYCSPSTTLPDMLDGYQKTSGRRLWDAKHENLS----------NEIDRIKKENDNMQVKLRHLKGEDINSLNHKELMVLEEGLTNGLSSISAKQS----EILRMVRKNDQILEEEHKQLQYALHQKEMAAMGG 174
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: GLOB_TOBAC (Floral homeotic protein GLOBOSA OS=Nicotiana tabacum GN=GLO PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.528e-26 Identity = 73/180 (40.56%), Postives = 105/180 (58.33%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCTTSSMVKTLERYQKCNYGAPEPNVSAREALELTSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLGQRTMTLRHAA 555 MGRG++E+KRIEN NRQVT++KRRNG+LKKA E+SVLCDA V++IIF++ GK++EF +T S+V L++Y K +A E K+K + +Q R+L GE++ LN +EL LE LD L IR+ + D L ++ K Q + E L + L A+ Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEFSST-SLVDILDQYHKLT------GRRLWDAKHENLDNEINKVKKDNDNMQIELRHLKGEDITSLNHRELMMLEDALDNGLTSIRNKQN----DLLRMMRKKTQSMEEEQDQLNWQLRQLEIAS 169
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: MADS2_ORYSJ (MADS-box transcription factor 2 OS=Oryza sativa subsp. japonica GN=MADS2 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.625e-25 Identity = 69/174 (39.66%), Postives = 104/174 (59.77%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCT-TSSMVKTLERYQ----KCNYGAPEPNVSAREALELTSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTL 522 MGRG++E+KRIEN NRQVTF+KRR+G+LKKA E+SVLCDAEV ++IFS+ GKLY++C+ +S+ + LE+YQ K + ++SA E ++K + +Q R+L GE+L L KEL +E LD + + ++D +++L + NK L Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSPKTSLSRILEKYQTNSGKILWDEKHKSLSA----------EIDRIKKENDNMQIELRHLKGEDLNSLQPKELIMIEEALDNGIVNVNDK----LMDHWERHVRTDKMLEDENKLL 160
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: MAD16_ORYSJ (MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica GN=MADS16 PE=1 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 1.625e-25 Identity = 79/215 (36.74%), Postives = 119/215 (55.35%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCTTSSMVKTL-ERYQKCNYGAPEPNVSAREALELTSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLS-EANKTLGQRTMTLRHAAFAGLQLMEGYQVNTLQLNPSAEDCGYGLKPARP 654 MGRG++E+KRIEN NRQVT++KRR G++KKA EL+VLCDA+VA+I+FS+ GK +EFC+ S+ +K + +RYQ+ S Q+ LK L+ R +GE+L L EL LE+ +D +LK++R R +++ T TE K+ S EA +TL Q AF + G +A+ + + P++P Sbjct: 1 MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSPSTDIKGIFDRYQQA------IGTSLWIEQYENMQRTLSHLKDINRNLRTEIRQRMGEDLDGLEFDELRGLEQNVDAALKEVRH-RKYHVITTQTETYKKKVKHSYEAYETLQQELGLREEPAFGFVDNTGGGWDGGAGAGAAADMFAFRVVPSQP 208
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: FBP1_PETHY (Floral homeotic protein FBP1 OS=Petunia hybrida GN=FBP1 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.625e-25 Identity = 70/174 (40.23%), Postives = 106/174 (60.92%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCTTSSMVKTLERYQKCNYGAPEPNVSAREALELTSQ---QEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLGQ 528 MGRG++E+KRIEN NRQVT++KRRNG+LKKA E+SVLCDA V++IIF++ GK++EF +T S+V L++Y K ++ R L+ + E K+K + +Q R+L GE++ LN +EL LE L+ L IR+ + + + + Q E+ + N L Q Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEFSST-SLVDILDQYHK---------LTGRRLLDAKHENLDNEINKVKKDNDNMQIELRHLKGEDITSLNHRELMILEDALENGLTSIRNKQNEVLRMMRKKTQSMEEEQDQLNCQLRQ 164 The following BLAST results are available for this feature:
BLAST of CN188943 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188943 ID=CN188943; Name=CN188943; organism=Citrus sinensis; type=EST; length=710bpback to top |