CN188931

Overview
NameCN188931
Unique NameCN188931
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length727
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9577 contig Csv1_Contig9577:294..1020. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188931 vs. ExPASy Swiss-Prot
Match: CRK27_ARATH (Cysteine-rich receptor-like protein kinase 27 OS=Arabidopsis thaliana GN=CRK27 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.794e-11
Identity = 40/92 (43.48%), Postives = 53/92 (57.61%), Query Frame = -3
Query:  447 DVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSS 722
            DVYSFGV+ LEI++GK N           P  +A+     GT MEL+DP L    +K E+ + ++IAL C   +P+ RPTM  VVSML   S
Sbjct:  517 DVYSFGVLVLEIITGKRNSGLGLGEGTDLPT-FAWQNWIEGTSMELIDPVLLQTHDKKESMQCLEIALSCVQENPTKRPTMDSVVSMLSSDS 607          
BLAST of CN188931 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.794e-11
Identity = 40/104 (38.46%), Postives = 58/104 (55.77%), Query Frame = -3
Query:  417 ADVYSFGVVALEIVSG-KNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAG 725
            +DVYSFGV+  EI+SG KN+  Y  D + +  + + + L  +G+ ++LVDP  G  +   +  R I IALLC       RP MS +V ML  SS +  V  + G
Sbjct:  691 SDVYSFGVLVFEIISGMKNSSLYQMDDSVSNLVTYTWRLWSNGSQLDLVDPSFGDNYQTHDITRCIHIALLCVQEDVDDRPNMSAIVQMLTTSSIVLAVPKQPG 794          
BLAST of CN188931 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.343e-11
Identity = 44/106 (41.51%), Postives = 59/106 (55.66%), Query Frame = -3
Query:  414 ADVYSFGVVALEIVSGKNNMS-YVPDSNCTCPL-DWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGG 725
            +DVYSFGV+ LEI+SGK N + Y  D      L  + + L  +G+ +ELVDP     +   E  R I IALLC       RPTMS +V ML  +S+I   +P+  G
Sbjct:  534 SDVYSFGVLVLEIISGKKNSNVYQMDGTSAGNLVTYTWRLWSNGSPLELVDPSFRDNYRINEVSRCIHIALLCVQEEAEDRPTMSAIVQMLT-TSSIALAVPQRPG 638          
BLAST of CN188931 vs. ExPASy Swiss-Prot
Match: CRK15_ARATH (Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.343e-11
Identity = 37/93 (39.78%), Postives = 52/93 (55.91%), Query Frame = -3
Query:  447 ADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSS 725
            +DVYSFGV+ LEI+SGK N S+         +  A+ L  +GT ++LVDP +     K E  R I I LLC    P+ RP +S +  ML  ++
Sbjct:  520 SDVYSFGVLVLEIISGKKNNSFYETDGAHDLVTHAWRLWSNGTALDLVDPIIIDNCQKSEVVRCIHICLLCVQEDPAERPILSTIFMMLTSNT 612          
BLAST of CN188931 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.343e-11
Identity = 37/92 (40.22%), Postives = 57/92 (61.96%), Query Frame = -3
Query:  453 DVYSFGVVALEIVSGKN--NMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEG 722
            DV+ +GV+ LE+++G+   +++ + + +    LDW   L +   L  LVD  L   +   E E++I++ALLCT +SP  RP MSEVV MLEG
Sbjct:  474 DVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 565          
BLAST of CN188931 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.059e-11
Identity = 38/94 (40.43%), Postives = 55/94 (58.51%), Query Frame = -3
Query:  447 ADVYSFGVVALEIVSGKNNMSY-VPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSS 725
            +DVYSFGV+ LEI+SGK N ++   D +    + +A+   R+G+ +ELVD  L   +   E  R I IALLC    P  RP +S ++ ML  +S
Sbjct:  504 SDVYSFGVLVLEIISGKRNSNFHETDESGKNLVTYAWRHWRNGSPLELVDSELEKNYQSNEVFRCIHIALLCVQNDPEQRPNLSTIIMMLTSNS 597          
BLAST of CN188931 vs. ExPASy Swiss-Prot
Match: CRK8_ARATH (Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 5.219e-11
Identity = 36/93 (38.71%), Postives = 51/93 (54.84%), Query Frame = -3
Query:  447 ADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSS 725
            +DVYSFGV+ LEI+SG+ N S+         L   + L  + T ++LVDP + +     E  R I I LLC    P+ RPT+S V  ML  ++
Sbjct:  536 SDVYSFGVLVLEIISGRKNSSFDESDGAQDLLTHTWRLWTNRTALDLVDPLIANNCQNSEVVRCIHIGLLCVQEDPAKRPTISTVFMMLTSNT 628          
BLAST of CN188931 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.219e-11
Identity = 41/105 (39.05%), Postives = 60/105 (57.14%), Query Frame = -3
Query:  414 ADVYSFGVVALEIVSGKNNMS-YVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGG 725
            +DVYSFGV+ LEI+SG+ N S Y  D++    + + + L   G+ ++LVD      + + E  R I IALLC       RPTMS +V ML  +S+I   +P+  G
Sbjct:  523 SDVYSFGVLVLEIISGRKNSSLYQMDASFGNLVTYTWRLWSDGSPLDLVDSSFRDSYQRNEIIRCIHIALLCVQEDTENRPTMSAIVQMLT-TSSIALAVPQPPG 626          
BLAST of CN188931 vs. ExPASy Swiss-Prot
Match: CRK14_ARATH (Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana GN=CRK14 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.816e-11
Identity = 40/100 (40.00%), Postives = 61/100 (61.00%), Query Frame = -3
Query:  435 ADVYSFGVVALEIVSGKNNMSYVPDSNCTCP--LDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNI-PD 725
            +DVYSFGV+ LEI+ G+NN  ++  S+ T    + +A+ L R+ + +ELVDP +       E  R I IALLC   +P+ RP++S +  ML  +S + PD
Sbjct:  519 SDVYSFGVLVLEIICGRNNR-FIHQSDTTVENLVTYAWRLWRNDSPLELVDPTISENCETEEVTRCIHIALLCVQHNPTDRPSLSTINMMLINNSYVLPD 617          
The following BLAST results are available for this feature:
BLAST of CN188931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
CRK27_ARATH1.794e-1143.48Cysteine-rich receptor-like protein kinase 27 OS=A... [more]
CRK23_ARATH1.794e-1138.46Putative cysteine-rich receptor-like protein kinas... [more]
CRK4_ARATH2.343e-1141.51Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]
CRK15_ARATH2.343e-1139.78Cysteine-rich receptor-like protein kinase 15 OS=A... [more]
BAK1_ARATH2.343e-1140.22BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
CRK33_ARATH3.059e-1140.43Putative cysteine-rich receptor-like protein kinas... [more]
CRK8_ARATH5.219e-1138.71Cysteine-rich receptor-like protein kinase 8 OS=Ar... [more]
CRK5_ARATH5.219e-1139.05Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
CRK14_ARATH6.816e-1140.00Cysteine-rich receptor-like protein kinase 14 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001A23_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001A23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188931 ID=CN188931; Name=CN188931; organism=Citrus sinensis; type=EST; length=727bp
GACGGAAAATTTTAGATACAAAGATGATGCGAGAAGGTATGACACATAGA
CGTAGGTTACAAAAAAGTTGAATGTTGAAACTTGAAACTAGCTTGCGGAT
GATTTTGCACATCCGCTGGACTCAAATTGTGTTGTGAAGATCATGGGCAG
ATTGTGAAGAACCAGTCCATGAGGGGACTGGTGTTGATAATTGGGCAACC
GATCTTTGTCTTTCCATATGAATATGACTGTCTCTCATGGCCTTAAACTT
CAAATATGCCTCTGCATTAATTTCACGGACATCATCGGTAGAGGAAGAAC
CAGGCAAGAAGCTGGCTGACGATGAATAATGAGACAGACTTCCTTCCAAA
CCCGAACTATTCATTTCGGCGTGGATGGTCTCTTAGAGTTTTAAACCTCA
AGTCTTCACTCAAACCACCGGCTTCAGGGATTACATCCGGAATGTTAGAA
GATCCTTCCAGCATGCTTACCACTTCAGACATGGTTGGCCTTAGTGAAGG
TGACGCATTGGTGCATAAGAGTGCTATTTTAATCATTCTCTCTGCTTCAA
CCTTGTTGAATTCTGATCCGAGCCTTGGATCCACTAACTCCATTAACGTA
CCACTTCGGTGTAAATGGAAGGCCCAGTCAAGAGGACAGGTGCAATTACT
GTCTGGCACATAACTCATATTATTCTTCCCACTGACGATTTCCAAAGCCA
CAACTCCGAAACTGTAAACATCTGCTT
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