CN188900
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_ZYMMO (Bifunctional protein folD OS=Zymomonas mobilis GN=folD PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.226e-37 Identity = 84/167 (50.30%), Postives = 113/167 (67.66%), Query Frame = -1 Query: 157 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYG-YRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 654 +N G LA+ P +PCTP GC+ LL S + GKNA+VIGRS IVG P + LL TV++ H TKN E++ +ADIV+AA G+ + V+ SWLKPGAVV+DVG V + + G R++GDV + EA ++AS ITPVPGGVGPMT+A LL+NT+ +A+ Sbjct: 127 VNAGRLAIG--TPSLVPCTPAGCMMLLEHSLGSLKGKNALVIGRSTIVGRPMAQLLLAADCTVTVAHRHTKNLEELCRQADIVVAAVGIPHFVKASWLKPGAVVIDVGINRVPAEDEAAKAAGKTRIVGDVDFVEAAKVASAITPVPGGVGPMTIACLLNNTVQAAR 291
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_LISW6 (Bifunctional protein folD OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=folD PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.226e-37 Identity = 82/169 (48.52%), Postives = 115/169 (68.05%), Query Frame = -1 Query: 148 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 654 +N+GNL + G++ F+PCTP G IEL+ +G +I GK AVVIGRSNIVG P + LL +ATV+I H+ TKN ++ EADI++ A G+A V+ ++KPGA+V+DVG + +L GDV +++ + A ITPVPGGVGPMT+ MLL+NTL +AKR + Sbjct: 124 VNVGNLFI-GKDS-FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKNLPEVAKEADILVVATGLAKFVKKEYIKPGAIVIDVGM---------DRDENNKLCGDVDFDDVIEEAGFITPVPGGVGPMTITMLLANTLKAAKRIW 281
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_CLOTH (Bifunctional protein folD OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=folD PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.226e-37 Identity = 79/166 (47.59%), Postives = 113/166 (68.07%), Query Frame = -1 Query: 157 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 654 +N+G L + P F+PCTP G +EL+ SG++I GK VV+GRSNIVG P ++LL + TV++ H+ T+N +++ ADI++ A G ++GS +KPGAVV+DVG ++ +L+GDV YE A R+AS ITPVPGGVGPMT+AML+ NT+ +AK Sbjct: 125 VNVGKLMIGN--PDFLPCTPAGVMELIKESGIDITGKECVVVGRSNIVGKPMAMLLLAQNGTVTVCHSRTQNIDEVCKRADILVVAVGKPEFIKGSSIKPGAVVIDVGINRLE---------NKKLVGDVEYESASRVASAITPVPGGVGPMTIAMLMKNTVKAAK 279
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_LISMO (Bifunctional protein folD OS=Listeria monocytogenes GN=folD PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.602e-37 Identity = 82/169 (48.52%), Postives = 116/169 (68.64%), Query Frame = -1 Query: 148 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 654 +N+GNL + G++ F+PCTP G IEL+ +G +I GK AVVIGRSNIVG P + LL +ATV+I H+ TK+ Q+ EADI++ A G+A V+ ++KPGA+V+DVG + +L GDV +++ ++ A ITPVPGGVGPMT+ MLL+NTL +AKR + Sbjct: 124 VNVGNLFI-GKDS-FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKDYIKPGAIVIDVGM---------DRDENNKLCGDVDFDDVVQEAGFITPVPGGVGPMTITMLLANTLKAAKRIW 281
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_LISMC (Bifunctional protein folD OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=folD PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.602e-37 Identity = 83/169 (49.11%), Postives = 115/169 (68.05%), Query Frame = -1 Query: 148 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 654 +N+GNL + G++ F+PCTP G IEL+ +G +I GK AVVIGRSNIVG P + LL +ATV+I H+ TK+ Q+ EADI++ A G+A V+ ++KPGAVV+DVG + +L GDV +++ + A ITPVPGGVGPMT+ MLL+NTL +AKR + Sbjct: 124 VNVGNLFI-GKDS-FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKDYIKPGAVVIDVGM---------DRDENNKLCGDVDFDDVVEEAGFITPVPGGVGPMTITMLLANTLKAAKRIW 281
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD2_PSEMY (Bifunctional protein folD 2 OS=Pseudomonas mendocina (strain ymp) GN=folD2 PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.602e-37 Identity = 88/176 (50.00%), Postives = 119/176 (67.61%), Query Frame = -1 Query: 127 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYG-YRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGFT*LPM 651 N+G L+ +GR+ L PCTP GC+ LL S ++ GK+AVVIGRSNIVG P + LL + H +VS+VH+ + N ++ +ADIV+AA G LV WLKPGAVV+DVG +D E G RL+GDV ++ A+ A+ ITPVPGGVGPMT+A L+ NTL +A+ + T LP+ Sbjct: 130 NVGGLS-QGRDVL-TPCTPAGCLRLLQDSCGDLTGKHAVVIGRSNIVGKPMAALLLKAHCSVSVVHSKSANLRELCRQADIVVAAVGKPRLVDADWLKPGAVVIDVGINRID-------EGGRSRLVGDVDFDSALTRAAAITPVPGGVGPMTIAFLMKNTLVAARLQHPATGLPL 296
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_LISMH (Bifunctional protein folD OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=folD PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.092e-37 Identity = 82/169 (48.52%), Postives = 115/169 (68.05%), Query Frame = -1 Query: 148 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 654 +N+GNL + G++ F+PCTP G IEL+ +G +I GK AVVIGRSNIVG P + LL +ATV+I H+ TK+ Q+ EADI++ A G+A V+ ++KPGA+V+DVG + +L GDV +++ + A ITPVPGGVGPMT+ MLL+NTL +AKR + Sbjct: 124 VNVGNLFI-GKDS-FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKDYIKPGAIVIDVGM---------DRDENNKLCGDVDFDDVVEEAGFITPVPGGVGPMTITMLLANTLKAAKRIW 281
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_PROVI (Bifunctional protein folD OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=folD PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.732e-37 Identity = 86/172 (50.00%), Postives = 113/172 (65.70%), Query Frame = -1 Query: 148 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLL----LQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 651 N+G L M + F+ CTP G +ELL R G+E GK+ VV+GRSNIVG P + L L+R + TV+I H+ T++ T +ADI+IAA G A + +K GAVV+DVG +D DP+ + G RL+GDV YE LAS +TPVPGGVGPMT+AMLL NTL S +R + Sbjct: 125 NLGRLVMGHLDKCFVSCTPYGILELLGRYGIETSGKHCVVVGRSNIVGKPMANLMLQKLKRSNCTVTICHSATQDIASYTRQADILIAAIGRAKFITPDMVKEGAVVIDVGINRID---DPTTKSGTRLVGDVDYEGVSALASAMTPVPGGVGPMTIAMLLKNTLHSFERTH 293
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_LISIN (Bifunctional protein folD OS=Listeria innocua GN=folD PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.732e-37 Identity = 82/169 (48.52%), Postives = 114/169 (67.46%), Query Frame = -1 Query: 148 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 654 +N+GNL + G++ F+PCTP G IEL+ +G +I GK AVVIGRSNIVG P + LL +ATV+I H+ TK+ Q+ EADI++ A G+A V+ ++KPGA+V+DVG + +L GDV +++ A ITPVPGGVGPMT+ MLL+NTL +AKR + Sbjct: 124 VNVGNLFI-GKDS-FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKEYIKPGAIVIDVGM---------DRDENNKLCGDVDFDDVKEQAGFITPVPGGVGPMTITMLLANTLKAAKRIW 281
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_LISMF (Bifunctional protein folD OS=Listeria monocytogenes serotype 4b (strain F2365) GN=folD PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.568e-37 Identity = 83/169 (49.11%), Postives = 115/169 (68.05%), Query Frame = -1 Query: 148 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 654 +N+GNL + G++ F+PCTP G IEL+ +G +I GK AVVIGRSNIVG P + LL +ATV+I H+ TK+ Q+ EADI++ A G+A V+ ++KPGAVV+DVG + +L GDV +++ + A ITPVPGGVGPMT+ MLL+NTL +AKR + Sbjct: 124 VNVGNLFI-GKDS-FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLIENATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKDYIKPGAVVIDVGM---------DRDENNKLCGDVDFDDVVEEAGFITPVPGGVGPMTITMLLANTLKAAKRIW 281 The following BLAST results are available for this feature:
BLAST of CN188900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188900 ID=CN188900; Name=CN188900; organism=Citrus sinensis; type=EST; length=654bpback to top |