CN188900
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_SHEPA (Bifunctional protein folD OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=folD PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.229e-29 Identity = 73/161 (45.34%), Postives = 96/161 (59.63%), Query Frame = -1 Query: 169 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTL 651 N+G LA R P+ CTP G + LL +GV+ G +AVV+G SNIVG P SL L T + H T+N E AD+V+ A G + G W+KPGA+V+DVG ++ +L+GDV ++ A + AS ITPVPGGVGPMT+A LL NTL Sbjct: 127 NVGRLAQR--IPVLRSCTPMGIMTLLKSTGVDTFGLDAVVVGASNIVGRPMSLELLLAGCTTTTCHRFTRNLEDKVRSADLVVVAVGKPGFIPGDWIKPGAIVIDVGINRLESG---------QLVGDVEFDVASQHASFITPVPGGVGPMTIASLLENTL 276
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_SHEDO (Bifunctional protein folD OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=folD PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.229e-29 Identity = 71/165 (43.03%), Postives = 99/165 (60.00%), Query Frame = -1 Query: 157 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 651 N+G LA R P+ PCTP G + L+ +GV+ G +A ++G SNIVG P +L L T + H TKN EQ +AD+++ A G + G W+KPGA+V+DVG ++ L+GDV ++ A + A ITPVPGGVGPMT+A LL NTL +A+ Sbjct: 127 NVGRLAQR--IPVLRPCTPLGIMTLIKSTGVDTYGLDATIVGASNIVGRPMTLELLLAGCTTTTCHRFTKNLEQKVRQADLLVVAVGKPGFILGEWIKPGAIVIDVGINRLE---------NGSLVGDVEFDAASQHAGFITPVPGGVGPMTIACLLENTLYAAE 280
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_ROSCS (Bifunctional protein folD OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=folD PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.229e-29 Identity = 75/165 (45.45%), Postives = 104/165 (63.03%), Query Frame = -1 Query: 157 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 651 N G LAM +P +P TP G +ELL+R+ + I G+ A V+GRS +VG P +LLL + HATV+I H+ TK+ + EADIV+AA G L+ ++PGAVV+D G V+V D +++GDV + +AS ITPVPGG GP+T MLL N L +A+ Sbjct: 127 NAGLLAMG--QPTMVPNTPAGGMELLLRNHILIKGQRATVVGRSVVVGKPMALLLLQEHATVTIAHSRTKDLASVVREADIVVAATGKPGLITADMVRPGAVVVDFG---VNVLGDG------KVVGDVDFAGVAEIASAITPVPGGTGPVTNIMLLRNVLRAAR 280
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_METFK (Bifunctional protein folD OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=folD PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.229e-29 Identity = 76/161 (47.20%), Postives = 103/161 (63.98%), Query Frame = -1 Query: 169 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTL 651 NIG LA+R +P CTP G I+LL +GV ++G +AVV+G SN VG P +L L TV+ H TK+ + + ADIV+AA G +L++G W+KPGA+V+D+G ++ D S L GDV ++ A A+ ITPVPGGVGPMTVA L+ NTL Sbjct: 127 NIGRLAVR--QPTLRSCTPYGVIKLLQSTGVRLLGLDAVVVGVSNHVGRPMALELLLAGCTVTSCHRHTKDLQASIARADIVVAAVGKPHLIKGEWIKPGAIVIDIG---INRLADGS------LCGDVEFDIAKTRAAWITPVPGGVGPMTVATLMQNTL 276
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_GLOVI (Bifunctional protein folD OS=Gloeobacter violaceus GN=folD PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.229e-29 Identity = 76/167 (45.51%), Postives = 105/167 (62.87%), Query Frame = -1 Query: 154 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 654 +N+G L +RG EP CTP G + +L +GV + GK AVVIGRS +VG P +L+L ATV H+ T + IT AD+++ AAG LV + ++PGAVV+DVG ++ E RL+GDV ++ +A+ ITPVP GVGPMTV MLL+NT+ S K+ Sbjct: 127 VNLGRL-VRG-EPGLRSCTPAGVMRILSEAGVPLAGKTAVVIGRSILVGKPVALMLLEKDATVITTHSRTADLAAITQMADVLVVAAGRPELVTAAMVRPGAVVIDVG-----INRVTDYEGNSRLVGDVDFDSVRDVAAAITPVPRGVGPMTVTMLLANTVQSYKQ 286
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_ANASP (Bifunctional protein folD OS=Anabaena sp. (strain PCC 7120) GN=folD PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.229e-29 Identity = 75/164 (45.73%), Postives = 105/164 (64.02%), Query Frame = -1 Query: 163 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDS 654 +N+G L +RG + L CTP G + LL + + GK AVV+GRS +VG P +L+L ATV+I H+ +++ + IT ADI+IAAAG+ L+ +KPGAVV+DVG V + S RL+GD+ + +A ITPVPGG+GPMTVA+LL NT+ S Sbjct: 129 VNLGRL-VRGEKGLR-SCTPAGVMRLLAEYEISLRGKQAVVVGRSILVGKPMALMLLEADATVTIAHSRSQDLKSITQNADILIAAAGLPGLITADMVKPGAVVVDVGINRVSDAHGKS-----RLVGDINFASIAGVAEYITPVPGGIGPMTVALLLQNTVTS 285
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: MTDC_CHICK (Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial OS=Gallus gallus GN=MTHFD2 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.605e-29 Identity = 78/177 (44.07%), Postives = 107/177 (60.45%), Query Frame = -1 Query: 154 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQ---RHH-----ATVSIVHALTKNPE--QITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 654 +N+G + + + +P TP G E++ R+G+ +GKN VV GRS VG+P ++LL RH ATV+I H T + Q T ADIV+AAAG+ NL+ +K GA V+DVG V + RL+GDV +E + AS ITPVPGGVGPMTVAML+ NT+ +AK+ Sbjct: 155 INVGRMCLD--QYSMLPATPWGVWEIIKRTGIPTLGKNVVVAGRSKNVGMPIAMLLHTDGRHERPGGDATVTISHRYTPKEQLKQHTIRADIVVAAAGIPNLITADMIKEGAAVIDVGITRVQDPITAKS----RLVGDVDFEGVKKKASYITPVPGGVGPMTVAMLMKNTIIAAKK 325
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_VIBVY (Bifunctional protein folD OS=Vibrio vulnificus (strain YJ016) GN=folD PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.605e-29 Identity = 72/161 (44.72%), Postives = 96/161 (59.63%), Query Frame = -1 Query: 169 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTL 651 N+G LA R P CTPKG I LL R + + GK+AV++G SNIVG P +L L T + H TK+ E +AD+++ A G N + G W+K GA+V+DVG ++ +L+GDV Y +A AS ITPVPGGVGPMTVA L+ NT+ Sbjct: 127 NVGRLAQR--IPKLRSCTPKGIITLLERYNIALRGKHAVIVGASNIVGRPMTLELLLAGCTTTTCHRFTKDLEGHVRQADVLVVAVGKPNFIPGEWVKEGAIVVDVGINRLESG---------KLIGDVEYNKARERASFITPVPGGVGPMTVASLIENTM 276
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_VIBVU (Bifunctional protein folD OS=Vibrio vulnificus GN=folD PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.605e-29 Identity = 72/161 (44.72%), Postives = 96/161 (59.63%), Query Frame = -1 Query: 169 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTL 651 N+G LA R P CTPKG I LL R + + GK+AV++G SNIVG P +L L T + H TK+ E +AD+++ A G N + G W+K GA+V+DVG ++ +L+GDV Y +A AS ITPVPGGVGPMTVA L+ NT+ Sbjct: 127 NVGRLAQR--IPKLRSCTPKGIITLLERYNIALRGKHAVIVGASNIVGRPMTLELLLAGCTTTTCHRFTKDLEGHVRQADVLVVAVGKPNFIPGEWVKEGAIVVDVGINRLESG---------KLIGDVEYNKARERASFITPVPGGVGPMTVASLIENTM 276
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_POLSQ (Bifunctional protein folD OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=folD PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.605e-29 Identity = 71/157 (45.22%), Postives = 100/157 (63.69%), Query Frame = -1 Query: 151 EPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRA 621 +P FIPCTP GC++LL I G AV++G SNIVG P ++LL + ATV+I ++ T++ T +ADI++ A G +V G +K GAVV+DVG + +L GDV ++ A +A ITPVPGGVGPMT+ MLL NTL++A++A Sbjct: 134 KPEFIPCTPYGCMKLLESIEYPIRGARAVIVGASNIVGKPMAMLLLQAGATVTICNSKTRDLAHHTKDADILVVATGKPKMVSGDMIKNGAVVIDVGINRLPDG---------KLCGDVDFDAAKYVAGWITPVPGGVGPMTITMLLMNTLEAAEKA 281 The following BLAST results are available for this feature:
BLAST of CN188900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188900 ID=CN188900; Name=CN188900; organism=Citrus sinensis; type=EST; length=654bpback to top |