CN188900
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_DICNV (Bifunctional protein folD OS=Dichelobacter nodosus (strain VCS1703A) GN=folD PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 8.789e-36 Identity = 85/167 (50.90%), Postives = 107/167 (64.07%), Query Frame = -1 Query: 157 LNIGNLAMRGREPLFIPCTPKGCIELLIRS-GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 654 LNIG L EP +PCTP GC +L R G + GK A++IGRSNIVG P + LL + HATV+I H+ T + + +ADIVIAA G LV+G W+K GAVVLDVG + V +L+GDV +E A +A+ ITPVPGG+GPMT+A LL NTL AK Sbjct: 126 LNIGRLW--AGEPCSVPCTPLGCSLILKRYFGDSLAGKKALIIGRSNIVGKPMAALLLQQHATVTIAHSKTPDVPALCRQADIVIAAVGQPELVKGDWIKSGAVVLDVGINRIAVGDKT------KLVGDVAFESAKEVAAAITPVPGGIGPMTIACLLKNTLTLAK 284
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_DESPS (Bifunctional protein folD OS=Desulfotalea psychrophila GN=folD PE=3 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 8.789e-36 Identity = 82/169 (48.52%), Postives = 109/169 (64.50%), Query Frame = -1 Query: 160 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH----HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSA 654 +NIG L + G + F+PCTP G E+L+RSGVE G VV+GRSNIVG P ++++ + +ATV+IVH +++ ADI+I AAGV NLV+ W+KPGA V+DVG V + + L GDV +E +A ITPVPGGVGPMT+AML+ NTL SA Sbjct: 126 VNIGRLMIGGDDVKFLPCTPAGIQEMLVRSGVETAGAEVVVVGRSNIVGKPIAMMMAQKGIGANATVTIVHTGSRDLATHCRRADILIVAAGVPNLVKPEWIKPGATVIDVGVNRVGTNSETGKAI---LRGDVDFEAVKEIAGKITPVPGGVGPMTIAMLMKNTLASA 291
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_OCHA4 (Bifunctional protein folD OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=folD PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.148e-35 Identity = 84/174 (48.28%), Postives = 114/174 (65.52%), Query Frame = -1 Query: 145 LNIGNLAMRGREPLFIPCTPKGCIELLIR-SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYG---YRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 654 +N+G L E F+PCTP G + ++ R G ++ G NAVVIGRSNIVG P LL +ATV++ H+ TK+ I ADI++AA G +V+G W+KPGA V+DVG ++ P+ E G RL+GDV + EA ++A ITPVPGGVGPMT+AML++NTL +A R G Sbjct: 125 INVGKLGTGEVETAFVPCTPAGAMIMIERIHGRDLSGLNAVVIGRSNIVGKPMFNLLLAANATVTVAHSRTKDLPAIARTADILVAAVGRPQMVKGDWVKPGATVIDVG-----INRIPAPERGEGRTRLVGDVDFVEAEKVAGAITPVPGGVGPMTIAMLMANTLTAACRTAG 293
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_MOOTA (Bifunctional protein folD OS=Moorella thermoacetica (strain ATCC 39073) GN=folD PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.148e-35 Identity = 80/166 (48.19%), Postives = 110/166 (66.27%), Query Frame = -1 Query: 154 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 651 N+GNL + + F PCTP GC+ LL ++G++ GK AVV+GRSNIVG P +++L HATV+I H+ T++ +ADI+IAA G L+ G +K GAVV+DVG V +L+GDV +E A + A ITPVPGGVGPMT+AMLL NT+++A+R Sbjct: 126 NVGNLVIGDK--CFYPCTPHGCMVLLEKAGIDPKGKKAVVVGRSNIVGKPVAMMLLARHATVTICHSRTRDLAAECRQADILIAAVGKPELITGDMIKEGAVVIDVGINRVGEK---------KLVGDVHFESAAQKAGWITPVPGGVGPMTIAMLLKNTVEAARR 280
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_FLAPJ (Bifunctional protein folD OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=folD PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.148e-35 Identity = 85/165 (51.52%), Postives = 111/165 (67.27%), Query Frame = -1 Query: 169 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH----HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTL 651 N G +A+ FIP TP G +ELL R GVE GK+ VVIGRS+IVG P S+L+ R ++TV++ H+ TKN QIT++ADI+I+A GV N ++ +K GAV++DVG V D + E GY + GDV +E + AS ITPVPGGVGPMT+AMLL NTL Sbjct: 125 NFGKMALD--MTTFIPATPFGILELLERYGVETKGKHTVVIGRSHIVGRPMSILMGRKGFPGNSTVTLTHSYTKNIAQITTQADIIISALGVPNYLKAEMVKDGAVIIDVGITRVP---DETNEKGYVITGDVDFENVSKKASHITPVPGGVGPMTIAMLLKNTL 284
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_DESOH (Bifunctional protein folD OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=folD PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.148e-35 Identity = 85/177 (48.02%), Postives = 113/177 (63.84%), Query Frame = -1 Query: 145 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLP-TSLLLQR---HHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPV---DVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 654 +N+G L + G E F PCTP G E+++R+GVE G VV+GRSNIVG P +++LQ+ +ATV++VH TKN ++ ADI+I AAGV LV+ W+KPGA V+DVG V + DP+ L GDV ++ A +A ITPVPGGVGPMT+ ML+ NTL S K G Sbjct: 126 VNVGRLMIGGSEVKFPPCTPAGIQEMIVRAGVETSGAEVVVVGRSNIVGKPIANMMLQKGPGANATVTVVHTRTKNMDEHCKRADILIVAAGVPGLVKPEWIKPGACVIDVGVNRVGEKPSAKDPNKMVAI-LSGDVDFDAAKEIAGSITPVPGGVGPMTITMLMLNTLKSLKFKLG 301
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD3_SPHWW (Bifunctional protein folD 3 OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=folD3 PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.148e-35 Identity = 83/171 (48.54%), Postives = 111/171 (64.91%), Query Frame = -1 Query: 145 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYG-YRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 654 +N G LA+ E ++PCTP GC+ LL ++ G AVVIGRSNIVG P + LL + TV+I H+ T++ ++ ADIV+AA G +VRG W++PGA V+DVG ++ P E G RL+GDV + EA +A ITPVPGGVGPMT+A+LL NTL +A R G Sbjct: 132 VNAGRLAVG--EAGYVPCTPLGCLMLLKDRRGDLSGLEAVVIGRSNIVGKPMAALLLAENCTVTIAHSRTRDLAEVVRRADIVVAAVGRPEMVRGDWIRPGATVIDVG-----INRVPGAEPGKTRLVGDVAFAEAAAVAGAITPVPGGVGPMTIAVLLRNTLVAAHRRAG 295
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_PARL1 (Bifunctional protein folD OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=folD PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.499e-35 Identity = 84/181 (46.41%), Postives = 118/181 (65.19%), Query Frame = -1 Query: 121 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYG---YRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGFT*LPMHY 654 LN G LA P +P TP+GC+ + R+G ++ GK+AV+IGRSN+VG P + LL + + TV+I H+ +++ I +ADI++AA G +VRG W+KPGAVV+DVG ++ P+ E G RL+GDV ++EA +A ITPVPGGVG MTVA LL NT+ +A R G LP + Sbjct: 126 LNAGRLA--SGLPAMVPATPEGCVIMAKRAGGDLSGKHAVIIGRSNLVGKPVAQLLLKENCTVTIAHSRSRDLPSIARQADILVAAVGRPGMVRGDWVKPGAVVIDVG-----INRVPAPEKGEGKTRLVGDVLFDEAAEVAGAITPVPGGVGLMTVACLLRNTVIAACRQNGIA-LPQDF 298
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD1_ACIAD (Bifunctional protein folD 1 OS=Acinetobacter sp. (strain ADP1) GN=folD1 PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.958e-35 Identity = 83/166 (50.00%), Postives = 113/166 (68.07%), Query Frame = -1 Query: 157 NIGNLAMRGREPLFIPCTPKGCIELLIRS-GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 651 N+G L+ +GR+ L PCTP GCI LL S G ++ G +AVVIGRSNIVG P + LL + TV++VH+ T+N EQ+ +ADIV+AA G AN++ S+LK AVV+DVG + RL+GDV +E+A+ + S ITPVPGGVGPMT+A L+ NTL + + Sbjct: 134 NVGGLS-QGRDVL-TPCTPTGCIRLLKDSLGDDLSGLHAVVIGRSNIVGKPMAALLLKESCTVTVVHSKTRNIEQVCQQADIVVAAVGKANMINASYLKADAVVIDVGINRI------MTHEKTRLVGDVDFEDALPMVSAITPVPGGVGPMTIAYLMKNTLQAVR 291
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_RHOCS (Bifunctional protein folD OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=folD PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.557e-35 Identity = 83/173 (47.98%), Postives = 113/173 (65.32%), Query Frame = -1 Query: 139 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYG-YRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGFT 654 +N G LA+ P +PCTP GC+ LL ++ G NAVV+GRSNIVG P + LL + +ATV++ H+ T + ++ ADI+IAA G ++RGSW+K GA+V+DVG V + G R++GDV +EEA +A ITPVPGGVGPMT+A LL NTL +A R+ G T Sbjct: 127 VNAGRLAVG--LPGLVPCTPLGCLMLLKDVVGDLRGLNAVVVGRSNIVGKPMANLLLQANATVTVAHSHTVDLPEVCRGADILIAAVGRPEMIRGSWIKEGAIVIDVGINRVPARDPAAAAAGKTRVVGDVAFEEAKGIAGAITPVPGGVGPMTIACLLLNTLTAACRSKGIT 297 The following BLAST results are available for this feature:
BLAST of CN188900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188900 ID=CN188900; Name=CN188900; organism=Citrus sinensis; type=EST; length=654bpback to top |