CN188900
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_CAUSK (Bifunctional protein folD OS=Caulobacter sp. (strain K31) GN=folD PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 5.697e-35 Identity = 84/172 (48.84%), Postives = 110/172 (63.95%), Query Frame = -1 Query: 145 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDP--SCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 654 +N G LA P CTP GC+ LL ++ GK AVVIGRSN++G P + LL TV+I H+ +++ I EADI++AA G A +VRG W+KPGA V+DVG S DP + RL+GDV ++EA +A ITPVPGGVGPMT+AMLL+NT+ +AKR G Sbjct: 127 VNAGRLA--SGLPALTSCTPAGCMVLLRDVVGDLTGKRAVVIGRSNLMGKPMAQLLLAADCTVTIAHSRSRDLPAICREADILVAAVGRAEMVRGDWIKPGATVIDVGISRFP-SRDPVAAAAGKTRLVGDVAFDEAKEVAGAITPVPGGVGPMTIAMLLANTVSAAKRLNG 295
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_AZOSE (Bifunctional protein folD OS=Azoarcus sp. (strain EbN1) GN=folD PE=3 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 5.697e-35 Identity = 81/166 (48.80%), Postives = 111/166 (66.87%), Query Frame = -1 Query: 154 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 651 N+G L+ +G+E F+PCTP G +++L GV + G AVVIGRSNIVG P ++LL ATV++ H+ T++ T ADI++AA G V G +KPGAVV+DVG + D +L GDV +E A +AS+ITPVPGGVGPMT+ MLL+NT++SA+R Sbjct: 126 NVGRLS-QGQEA-FLPCTPHGVMKMLEAGGVPVQGAEAVVIGRSNIVGKPMAMLLTNAGATVTVTHSKTRDLAFHTRRADILVAAIGKPRFVTGDMIKPGAVVIDVGINRLTEGPDAG-----KLCGDVDFESAKEVASLITPVPGGVGPMTITMLLANTVESAER 284
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_NITHX (Bifunctional protein folD OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=folD PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 7.440e-35 Identity = 81/164 (49.39%), Postives = 105/164 (64.02%), Query Frame = -1 Query: 160 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSA 651 N G LA G P PCTP GCI L + G +A+VIGRSN+VG P LL +ATV+I H+ ++N ++ AD+V AA G A +VRG WLKPGA V+DVG ++ P+ + RL+GDV ++EAM +A +TPVPGGVG MTVA LL NTL +A Sbjct: 127 NAGRLA--GGLPALSPCTPLGCIILTKSVHSSLEGMDAIVIGRSNLVGRPLVQLLLNENATVTIAHSRSRNLPELCRRADLVYAAVGKAEMVRGDWLKPGATVIDVG-----ITRRPAADGKTRLIGDVAFDEAMEVAGAVTPVPGGVGQMTVACLLVNTLRAA 283
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD1_THICR (Bifunctional protein folD 1 OS=Thiomicrospira crunogena (strain XCL-2) GN=folD1 PE=3 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 7.440e-35 Identity = 80/164 (48.78%), Postives = 107/164 (65.24%), Query Frame = -1 Query: 160 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSA 651 N+G LA R P PCTP G + +L ++G+ + G NAVV+G SNIVG+P +L L ATV++ H+ TK+ Q +EAD+V+ G+ N+V+G W+K GA+V+DVG +D D S L GDV Y+ A AS ITPVPGGVGPMT+A LL NTL +A Sbjct: 127 NMGRLATR--LPELAPCTPHGVMTMLAKTGIPLRGLNAVVVGASNIVGVPMALELLNERATVTVCHSATKDLPQKVAEADLVVVGVGIPNMVKGDWIKDGAIVIDVGINRLD---DGS------LCGDVEYDVAKEKASWITPVPGGVGPMTIATLLQNTLQAA 279
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_GLUOX (Bifunctional protein folD OS=Gluconobacter oxydans GN=folD PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 9.717e-35 Identity = 74/151 (49.01%), Postives = 102/151 (67.55%), Query Frame = -1 Query: 157 IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 609 +PCTP GC+ LL ++ G +AVVIG SN+VG P + LL + + TV++ H T+N +++ EADI++ A G + LVRG W+KPGA V+DVG V P+ RL+GDV ++EA +A ITPVPGGVGPMT+A LL NTL +A+ Sbjct: 149 VPCTPLGCLMLLQSVHKDMTGMHAVVIGASNLVGKPMAQLLLKENCTVTVAHIHTRNTKELAREADILVVATGKSELVRGDWIKPGATVIDVGITRV-----PAENGKTRLVGDVAFDEAFPIAGHITPVPGGVGPMTIACLLHNTLQAAR 294
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_GLUDA (Bifunctional protein folD OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=folD PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 9.717e-35 Identity = 79/172 (45.93%), Postives = 111/172 (64.53%), Query Frame = -1 Query: 139 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGFT 654 +N G LA+ +P +PCTP GC+ LL ++ G +AV+IG SN+VG P + LL TV++ H T++P + + DI++ A G LVRG W+KPGA V+DVG + + PS + RL+GDV ++EA+ A ITPVPGGVGPMT+A LL+NTL +A+R G T Sbjct: 144 VNAGRLALG--QPGIVPCTPLGCLMLLKSELGDLRGLHAVIIGASNLVGRPMARLLLAEGCTVTVGHIDTRDPAALARQGDILVVATGCHGLVRGDWIKPGAAVIDVGITRISL---PSGK--TRLVGDVAFDEAVTRAGCITPVPGGVGPMTIACLLNNTLAAARRIVGAT 308
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_DEHSC (Bifunctional protein folD OS=Dehalococcoides sp. (strain CBDB1) GN=folD PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 9.717e-35 Identity = 83/175 (47.43%), Postives = 117/175 (66.86%), Query Frame = -1 Query: 145 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLP-TSLLLQR---HHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLM-GDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 654 +N+G + + EP F+PCTP G ELLIRSG++I G + V++GRSN+VG P ++LLQ+ +ATV+I H+ TKN +IT +ADI++AA G + ++ GAVV+DVGT + + + G R++ GDV +EE A ITPVP GVGPMT+ ML+ NTL +AKRA G Sbjct: 126 VNVGRMCLG--EPCFLPCTPHGVQELLIRSGIKIEGTHVVIVGRSNLVGKPLANILLQKAPGANATVTICHSGTKNLPEITRQADILVAAMGKPKFITADMVREGAVVIDVGTTCIGYTPE-----GKRILSGDVDFEEVKEKAFAITPVPKGVGPMTIIMLMLNTLTAAKRAVG 293
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD2_GEOSL (Bifunctional protein folD 2 OS=Geobacter sulfurreducens GN=folD2 PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 9.717e-35 Identity = 79/167 (47.31%), Postives = 107/167 (64.07%), Query Frame = -1 Query: 151 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRA 651 N+G L +P F PCTP G + +L +GV++ GK VV+GRSNIVG P +L+ + +ATV+I H+ T++ AD+VIAA GV +++G W+K GAVV+DVG V +L+GDV + A AS ITPVPGGVGPMT+ MLL NTL++AK A Sbjct: 125 NVGRLVTG--KPTFQPCTPYGVMVMLQEAGVDLAGKEVVVVGRSNIVGKPVALMCLQRNATVTICHSKTRDLPGRVRAADVVIAAVGVPEMIKGDWIKEGAVVIDVGVNRVGEK---------KLVGDVEFAAAAERASAITPVPGGVGPMTITMLLHNTLEAAKMA 280
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_STAES (Bifunctional protein folD OS=Staphylococcus epidermidis (strain ATCC 12228) GN=folD PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.269e-34 Identity = 79/172 (45.93%), Postives = 110/172 (63.95%), Query Frame = -1 Query: 139 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGFT 654 +NIG L + E F+PCTP G +E+L + + + GKNAVVIGRS+IVG P S LL + +ATV+I+H+ TKN +AD++++A G LV +K GAV++DVG P + +L GDV Y+E +AS ITPVPGGVGP+T+ M+L+NTL + K G T Sbjct: 125 INIGKLYID--EQTFVPCTPLGIMEILKHADINLEGKNAVVIGRSHIVGQPVSKLLLQANATVTILHSRTKNMNAHLKQADVIVSAVGQPGLVTKENVKKGAVIIDVGNTP---------DENGKLKGDVAYDEVKEIASAITPVPGGVGPLTITMVLNNTLLAEKLRRGLT 285
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_SORC5 (Bifunctional protein folD OS=Sorangium cellulosum (strain So ce56) GN=folD PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.269e-34 Identity = 79/166 (47.59%), Postives = 105/166 (63.25%), Query Frame = -1 Query: 157 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 654 +N G LAM GR PCTP GC+ LL +GVE+ G AVV+GRSN+VG P + LL HATV+I H T++ + + EAD+++ AAG A L+ G W+K GA V+DVG D +L+GDV ++ A+ ITPVPGGVGPMT+A LL TL +A+ Sbjct: 126 VNAGLLAM-GRPGGIAPCTPVGCMRLLAEAGVELAGARAVVVGRSNLVGRPMAQLLLARHATVAIAHTRTRDLKALCREADVLVVAAGKAKLIGGDWIKEGATVIDVGMNRDDAG---------KLVGDVDFDAVRERAAWITPVPGGVGPMTIASLLETTLRAAE 281 The following BLAST results are available for this feature:
BLAST of CN188900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188900 ID=CN188900; Name=CN188900; organism=Citrus sinensis; type=EST; length=654bpback to top |