CN188899
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188899 vs. ExPASy Swiss-Prot
Match: UBIQ_LEIMA (Ubiquitin OS=Leishmania major GN=UB-EP52 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.459e-14 Identity = 37/39 (94.87%), Postives = 39/39 (100.00%), Query Frame = -2 Query: 187 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 303 PDQQRLIFAGKQLE+GRTL+DYNIQKESTLHLVLRLRGG Sbjct: 38 PDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CN188899 vs. ExPASy Swiss-Prot
Match: UBIQ_LEITA (Ubiquitin OS=Leishmania tarentolae GN=UB-EP52 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.454e-14 Identity = 36/39 (92.31%), Postives = 38/39 (97.44%), Query Frame = -2 Query: 187 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 303 PDQQRLIFA KQLE+GRTL+DYNIQKESTLHLVLRLRGG Sbjct: 38 PDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CN188899 vs. ExPASy Swiss-Prot
Match: UBIQ_LUMTE (Ubiquitin (Fragment) OS=Lumbricus terrestris PE=1 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 1.235e-13 Identity = 36/37 (97.30%), Postives = 37/37 (100.00%), Query Frame = -2 Query: 193 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 303 PDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLR Sbjct: 27 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 63
BLAST of CN188899 vs. ExPASy Swiss-Prot
Match: UBIL_NPVAC (Ubiquitin-like protein OS=Autographa californica nuclear polyhedrosis virus GN=V-UBI PE=3 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 4.692e-13 Identity = 34/38 (89.47%), Postives = 37/38 (97.37%), Query Frame = -2 Query: 187 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 300 DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG Sbjct: 39 DQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 76
BLAST of CN188899 vs. ExPASy Swiss-Prot
Match: UBIL_NPVOP (Ubiquitin-like protein OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=V-UBI PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.128e-13 Identity = 34/39 (87.18%), Postives = 38/39 (97.44%), Query Frame = -2 Query: 184 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGD 300 DQQRLI+AGKQLED +TLADYNIQKESTLH+VLRLRGG+ Sbjct: 39 DQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGGN 77 The following BLAST results are available for this feature:
BLAST of CN188899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188899 ID=CN188899; Name=CN188899; organism=Citrus sinensis; type=EST; length=304bpback to top |