CN188884
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_MAGSM (50S ribosomal protein L1 OS=Magnetococcus sp. (strain MC-1) GN=rplA PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 9.814e-35 Identity = 67/134 (50.00%), Postives = 97/134 (72.39%), Query Frame = -1 Query: 364 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 765 AD+VG DDL+E+I+GG++EFD+++A+PD+M V LGKILGPR +MPNPK GTVT ++ + ++E K G+V +R +K+GI+H GKA F +DL+ N A V+ + KP AKG Y K I S+MGP I+++ Sbjct: 92 ADVVGADDLLEKIQGGWLEFDRVVATPDVMGVVGRLGKILGPRNMMPNPKLGTVTFDVAKVVQEIKAGQVAFRVEKSGIIHAGVGKASFPVEDLVENITALVEQLRRMKPAAAKGTYMKKVSISSTMGPGIKVD 225
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_GEOMG (50S ribosomal protein L1 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=rplA PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 9.814e-35 Identity = 71/138 (51.45%), Postives = 96/138 (69.57%), Query Frame = -1 Query: 352 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 765 AD VG +DL+ +I+ G+ +FD IA+PDMM V +GK+LGPRGLMPNPK GTVT ++ +A++E K GKVE+R +K GIVH P GKA F D L N LA V+++ KP AKG Y K + S+MGP + L+I ++ Sbjct: 92 ADHVGAEDLVAKIQEGWFDFDTAIATPDMMGVVGKIGKLLGPRGLMPNPKVGTVTFDVGRAVKESKAGKVEFRVEKAGIVHAPVGKASFDADKLKENLLALVEALVKAKPSAAKGTYIKKISLSSTMGPGLNLDIADV 229
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_GEOLS (50S ribosomal protein L1 OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=rplA PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 9.814e-35 Identity = 71/138 (51.45%), Postives = 94/138 (68.12%), Query Frame = -1 Query: 352 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 765 AD VG DDL+ +I+ G+ EFD IA+PDMM V +GK+LGPRGLMPNPK GTVT + +A++E K GKVE+R +K GIVH P GK F + L N +A V+++ KP AKG Y K + S+MGP I L+I ++ Sbjct: 92 ADYVGADDLVAKIQEGWFEFDTAIATPDMMGVVGKIGKLLGPRGLMPNPKVGTVTFEVGRAVKESKAGKVEFRVEKAGIVHAPIGKVSFDAEKLQGNLVALVEALVKAKPSAAKGTYIKKISLSSTMGPGINLDISDV 229
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_OCEIH (50S ribosomal protein L1 OS=Oceanobacillus iheyensis GN=rplA PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.282e-34 Identity = 65/135 (48.15%), Postives = 95/135 (70.37%), Query Frame = -1 Query: 361 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNI 765 AD VG D I +I G+ EFD ++A+PDMM +V LG++LGP+GLMPNPK GTVT + +A+ + K GKVEYR DK+ +H+P GK F + L+ NF+A + + KP+ +KG+Y K+A I S+MGP I++++ Sbjct: 92 ADYVGEGDYINKINQGWFEFDVIVATPDMMAEVGKLGRVLGPKGLMPNPKTGTVTFEVEKAVNDIKAGKVEYRVDKSANIHVPIGKISFDDQKLVDNFVALTEQLVKVKPQSSKGIYMKNASITSTMGPGIKVDV 226
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_SOLUE (50S ribosomal protein L1 OS=Solibacter usitatus (strain Ellin6076) GN=rplA PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.674e-34 Identity = 69/135 (51.11%), Postives = 96/135 (71.11%), Query Frame = -1 Query: 364 ADLVGGDDLIEQIKG-GFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 765 AD VGG+D++ +I+ + ++D +IA+PDMM V LGK+LGPRGLMPNPK GTVT ++ +AI E K GKVE+R DKTGI+H P GK FS D L+ N + + ++ KP AKG Y +SA +CS+MGP + ++ Sbjct: 92 ADFVGGEDMVNKIQSESWTDYDAVIATPDMMRSVGKLGKVLGPRGLMPNPKTGTVTVDVAKAIAEIKAGKVEFRVDKTGIIHAPVGKISFSADKLVENASSLIAAVIKAKPAVAKGKYVRSATVCSTMGPGVAID 226
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_GLUOX (50S ribosomal protein L1 OS=Gluconobacter oxydans GN=rplA PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.674e-34 Identity = 70/135 (51.85%), Postives = 96/135 (71.11%), Query Frame = -1 Query: 361 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNI 765 A++VG +DL E+I+ G ++FD+ IA+PDMM V LGKILGPRGLMPNP+ GTVT ++ AI K G+VEYRA+K GI+H GKA F E L+ N A V +++ +P GAKG Y K A + S+MGP +R+++ Sbjct: 91 AEVVGAEDLAEKIQAGEIDFDRCIATPDMMALVGRLGKILGPRGLMPNPRLGTVTMDVKGAITAAKSGQVEYRAEKAGIIHAGVGKASFDEAKLVENINALVDAVQKARPTGAKGTYLKKAALSSTMGPGVRVDV 225
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_CLOK5 (50S ribosomal protein L1 OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=rplA PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.674e-34 Identity = 72/141 (51.06%), Postives = 99/141 (70.21%), Query Frame = -1 Query: 346 ADLVGGDDLIEQI-KGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLD 765 AD VG ++ +E+I K + +FD ++A+PDMM V LG+ILGP+GLMPNPK+GTVT ++ +AI+E K GKVEYR DKT IVH+P GK F LL NF +++I KP AKG Y KS + S+MGP I++N ++L+ Sbjct: 89 ADYVGAEEYVEKIQKENWFDFDVVVATPDMMGVVGRLGRILGPKGLMPNPKSGTVTFDVAKAIQEIKAGKVEYRVDKTSIVHVPIGKKSFEVQKLLDNFRVLMEAIIKAKPSAAKGQYLKSVAVSSTMGPGIKINSVKVLE 229
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_CLOK1 (50S ribosomal protein L1 OS=Clostridium kluyveri (strain NBRC 12016) GN=rplA PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.674e-34 Identity = 72/141 (51.06%), Postives = 99/141 (70.21%), Query Frame = -1 Query: 346 ADLVGGDDLIEQI-KGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLD 765 AD VG ++ +E+I K + +FD ++A+PDMM V LG+ILGP+GLMPNPK+GTVT ++ +AI+E K GKVEYR DKT IVH+P GK F LL NF +++I KP AKG Y KS + S+MGP I++N ++L+ Sbjct: 91 ADYVGAEEYVEKIQKENWFDFDVVVATPDMMGVVGRLGRILGPKGLMPNPKSGTVTFDVAKAIQEIKAGKVEYRVDKTSIVHVPIGKKSFEVQKLLDNFRVLMEAIIKAKPSAAKGQYLKSVAVSSTMGPGIKINSVKVLE 231
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_CLOBM (50S ribosomal protein L1 OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=rplA PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.674e-34 Identity = 70/141 (49.65%), Postives = 101/141 (71.63%), Query Frame = -1 Query: 346 ADLVGGDDLIEQI-KGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLD 765 AD VG ++L+E+I K + +FD ++A+PDMM V LG++LGP+GLMPNPK+GTVT ++ +AI + K GKVEYR DKT I+H+P GK+ F E+ L NF ++++ KP AKG Y KS I S+MGP I++N ++L+ Sbjct: 89 ADFVGAEELVEKIQKENWFDFDVVVATPDMMGVVGRLGRVLGPKGLMPNPKSGTVTFDVAKAIADIKAGKVEYRVDKTAIIHVPIGKSSFGEEKLSDNFHVLMEAVVKAKPAAAKGQYIKSVAISSTMGPGIKINPGKVLE 229
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_CLOBL (50S ribosomal protein L1 OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=rplA PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.674e-34 Identity = 70/141 (49.65%), Postives = 101/141 (71.63%), Query Frame = -1 Query: 346 ADLVGGDDLIEQI-KGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLD 765 AD VG ++L+E+I K + +FD ++A+PDMM V LG++LGP+GLMPNPK+GTVT ++ +AI + K GKVEYR DKT I+H+P GK+ F E+ L NF ++++ KP AKG Y KS I S+MGP I++N ++L+ Sbjct: 89 ADFVGAEELVEKIQKENWFDFDVVVATPDMMGVVGRLGRVLGPKGLMPNPKSGTVTFDVAKAIADIKAGKVEYRVDKTAIIHVPIGKSSFGEEKLSDNFHVLMEAVVKAKPAAAKGQYIKSVAISSTMGPGIKINPGKVLE 229 The following BLAST results are available for this feature:
BLAST of CN188884 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188884 ID=CN188884; Name=CN188884; organism=Citrus sinensis; type=EST; length=765bpback to top |