CN188821
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: FFT1_SCHPO (Uncharacterized ATP-dependent helicase fft1 OS=Schizosaccharomyces pombe GN=fft1 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.377e-17 Identity = 47/138 (34.06%), Postives = 79/138 (57.25%), Query Frame = -1 Query: 341 MLDAIHKLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE-NLGQVLDGHENSLEVSSSQIRS 751 +LD + + + +R+DG TP +RQ L+ +F ++ K +LS K+GG G+ LT A+ VI + S+ P D +QAEDRAHR+GQ V+VY L+ +T+++ + + +KL D + E+S ++S Sbjct: 792 VLDILEYVLNTLDLEFLRLDGSTPVETRQQLIDDFHTNENYKVFLLSTKSGGFGINLTCANIVILFDCSFNPFDDMQAEDRAHRVGQTRPVHVYRLITKNTIEENIRRLANTKLTLESSLTTDSEKIQKEISGELMKS 929
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: INO80_CANGA (Putative DNA helicase INO80 OS=Candida glabrata GN=INO80 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.054e-17 Identity = 51/157 (32.48%), Postives = 85/157 (54.14%), Query Frame = -1 Query: 287 MLDAIHKLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPAK--QKTLDSFLKRCNNV 751 M+D + + ++ + IR+DG + R+ LV ++Q ++ +LS +AGG+G+ LTAA TVIF + W P QA DRAHR+GQ V VY LL T+++ + D + K + V++G + ++ R + K+L S + NN+ Sbjct: 1323 MMDLMEEYLTYRQYNHIRLDGSSKLEDRRDLVHDWQTNPEIFIFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTKQVTVYRLLVRGTIEERMRDRAKQKEQVQQVVMEGKTKDTNIQTTHTRPEHEQLTPKSLSSEPEATNNL 1479
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: INO80_ARATH (DNA helicase INO80 complex homolog 1 OS=Arabidopsis thaliana GN=INO80 PE=2 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 6.916e-17 Identity = 43/104 (41.35%), Postives = 64/104 (61.54%), Query Frame = -1 Query: 440 MLDAIHKLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDD 751 ML+ + +K +R+DG + R+ +V +FQ + D+ +LS +AGG+G+ LTAA TVIF E W P +QA DRAHR+GQ V VY L+ +TV++ Sbjct: 1234 MLNILEDYMNYRKYKYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEE 1337
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: INO80_DEBHA (Putative DNA helicase INO80 OS=Debaryomyces hansenii GN=INO80 PE=3 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 9.032e-17 Identity = 58/171 (33.92%), Postives = 87/171 (50.88%), Query Frame = -1 Query: 248 MLDAIHKLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPAKQKTL---DSFLKRCNNVDDSEHQQKLKYRK 751 M+D + + ++ IR+DG + R+ LV ++Q K ++ +LS +AGG+G+ LTAA TVIF + W P QA DRAHR+GQ V VY LL T+++ + D + K + V++G S + L DS N DDSE +Q L+ K Sbjct: 1170 MMDLMEEYLTYRQHKYIRLDGSSKLDDRRDLVHDWQTKPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLTRGTIEERMRDRAKQKEQVQQVVMEGKSAIANKEESGNKKKDVAFLLLGNDDSSAAALN--DDSEEKQNLQDSK 1338
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: INO80_LODEL (Putative DNA helicase ino80 OS=Lodderomyces elongisporus GN=INO80 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.180e-16 Identity = 46/128 (35.94%), Postives = 75/128 (58.59%), Query Frame = -1 Query: 368 MLDAIHKLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSL 751 M+D + + K+ IR+DG + R+ LV ++Q K ++ +LS +AGG+G+ LTAA TV+F + W P QA DRAHR+GQ V VY LL +T+++ + D + K + V++G ++ Sbjct: 1339 MMDLMEEYLTFKQHKYIRLDGSSKLDDRRDLVHDWQTKPEIFVFLLSTRAGGLGINLTAADTVVFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLTRNTIEERMRDRAKQKEQVQQVVMEGKATTI 1466
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: INO80_YEAST (Putative DNA helicase INO80 OS=Saccharomyces cerevisiae GN=INO80 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.012e-16 Identity = 45/135 (33.33%), Postives = 76/135 (56.30%), Query Frame = -1 Query: 347 MLDAIHKLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQI 751 M+D + + ++ + IR+DG + R+ LV ++Q ++ +LS +AGG+G+ LTAA TVIF + W P QA DRAHR+GQ V VY LL T+++ + D + K + V++G + + ++ Sbjct: 1327 MMDLMEEYLTYRQYNHIRLDGSSKLEDRRDLVHDWQTNPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLVRGTIEERMRDRAKQKEQVQQVVMEGKTQEKNIKTIEV 1461
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: INO80_YEAS7 (Putative DNA helicase INO80 OS=Saccharomyces cerevisiae (strain YJM789) GN=INO80 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.012e-16 Identity = 45/135 (33.33%), Postives = 76/135 (56.30%), Query Frame = -1 Query: 347 MLDAIHKLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQI 751 M+D + + ++ + IR+DG + R+ LV ++Q ++ +LS +AGG+G+ LTAA TVIF + W P QA DRAHR+GQ V VY LL T+++ + D + K + V++G + + ++ Sbjct: 1333 MMDLMEEYLTYRQYNHIRLDGSSKLEDRRDLVHDWQTNPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLVRGTIEERMRDRAKQKEQVQQVVMEGKTQEKNIKTIEV 1467
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: MOT1_SCHPO (Probable helicase mot1 OS=Schizosaccharomyces pombe GN=mot1 PE=1 SV=4) HSP 1 Score: 85.8853 bits (211), Expect = 2.628e-16 Identity = 49/130 (37.69%), Postives = 70/130 (53.85%), Query Frame = -1 Query: 371 MLDAIHKLFLKKK---VHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENS 751 MLD + K L+ V +R+DG P RQ VT+F + +L+ GG+GL LT A TVIF E W P +QA DRAHRIGQ VNVY L+ +++ + + R K+ N+ + +N+ Sbjct: 1748 MLDMVEKDLLQATMPDVTYMRLDGSVEPTKRQEAVTKFNNDPSIDVLLLTTHVGGLGLNLTGADTVIFVEHDWNPMRDLQAMDRAHRIGQKKVVNVYRLITRGCLEEKIMGLQRFKM-NVASTVVNQQNA 1876
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: INO80_KLULA (Putative DNA helicase INO80 OS=Kluyveromyces lactis GN=INO80 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.628e-16 Identity = 48/121 (39.67%), Postives = 73/121 (60.33%), Query Frame = -1 Query: 389 MLDAIHKLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVL 751 M+D + + ++ IR+DG + R+ LV ++Q K D+ +LS +AGG+G+ LTAA TVIF + W P QA DRAHR+GQ V VY LL T+++ + D + K E++ QV+ Sbjct: 1347 MMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRAKQK-EHVQQVV 1466
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: INO80_VANPO (Putative DNA helicase INO80 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=INO80 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.432e-16 Identity = 47/121 (38.84%), Postives = 73/121 (60.33%), Query Frame = -1 Query: 389 MLDAIHKLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVL 751 M+D + + ++ IR+DG + R+ LV ++Q + D+ +LS +AGG+G+ LTAA TVIF + W P QA DRAHR+GQ V VY LL T+++ + D + K E++ QV+ Sbjct: 1405 MMDLMEEYLTYRQYSHIRLDGSSKLEDRRDLVHDWQTRPDIFIFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRAKQK-EHVQQVV 1524 The following BLAST results are available for this feature:
BLAST of CN188821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 138
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188821 ID=CN188821; Name=CN188821; organism=Citrus sinensis; type=EST; length=757bpback to top |