CN188809
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188809 vs. ExPASy Swiss-Prot
Match: YKT6_MOUSE (Synaptobrevin homolog YKT6 OS=Mus musculus GN=Ykt6 PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 5.540e-39 Identity = 93/202 (46.04%), Postives = 127/202 (62.87%), Query Frame = -1 Query: 199 MKITALLVL-KCNPDGSDPVVLATAMDVSHFGYFQRSSVKEFILFVARTVGKRTPPGQRQSVQHEEYKVHSYNRN-GLCAMGFMDDHYPVRSSFSLLNQVLDEYQKNFGE-SWRTAQADNMQPWPYLNEALNKYQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLSAASQMFYKQAKKTNQCCTIL 795 MK+ +L VL K +P V+L A DVS F +FQRSSV+EF+ F ++ + +R+ G R SV+ +EY H Y R+ L + D YP R +F+LL +VLDE+ K W +Q + L++ L+KYQ+P EAD + K+Q ELDETKIILH T++S+L RGEKLD LV KS L S+ FYK A+K N CC I+ Sbjct: 1 MKLYSLSVLYKGDPKA---VLLKAAYDVSSFSFFQRSSVQEFMTFTSQLIVERSGKGSRASVKEQEYLCHVYVRSDSLAGVVIADSEYPSRVAFTLLEKVLDEFSKQVDRIDWPVGSPATIQ-YTGLDDHLSKYQNPREADPMSKVQAELDETKIILHNTMESLLERGEKLDDLVSKSEVLGTQSKAFYKTARKQNSCCAIM 198
BLAST of CN188809 vs. ExPASy Swiss-Prot
Match: YKT6_HUMAN (Synaptobrevin homolog YKT6 OS=Homo sapiens GN=YKT6 PE=1 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.234e-38 Identity = 85/183 (46.45%), Postives = 117/183 (63.93%), Query Frame = -1 Query: 199 VVLATAMDVSHFGYFQRSSVKEFILFVARTVGKRTPPGQRQSVQHEEYKVHSYNRN-GLCAMGFMDDHYPVRSSFSLLNQVLDEYQKNFGE-SWRTAQADNMQPWPYLNEALNKYQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLSAASQMFYKQAKKTNQCCTIL 741 V+L A DVS F +FQRSSV+EF+ F ++ + +R+ G R SV+ ++Y H Y RN L + D+ YP R +F+LL +VLDE+ K W + +P L+ L++YQ+P EAD + K+Q ELDETKIILH T++S+L RGEKLD LV KS L S+ FYK A+K N CC I+ Sbjct: 17 VLLKAAYDVSSFSFFQRSSVQEFMTFTSQLIVERSSKGTRASVKEQDYLCHVYVRNDSLAGVVIADNEYPSRVAFTLLEKVLDEFSKQVDRIDWPVGSPATIH-YPALDGHLSRYQNPREADPMTKVQAELDETKIILHNTMESLLERGEKLDDLVSKSEVLGTQSKAFYKTARKQNSCCAIM 198
BLAST of CN188809 vs. ExPASy Swiss-Prot
Match: YKT6_RAT (Synaptobrevin homolog YKT6 OS=Rattus norvegicus GN=Ykt6 PE=1 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.328e-37 Identity = 84/183 (45.90%), Postives = 115/183 (62.84%), Query Frame = -1 Query: 199 VVLATAMDVSHFGYFQRSSVKEFILFVARTVGKRTPPGQRQSVQHEEYKVHSYNRN-GLCAMGFMDDHYPVRSSFSLLNQVLDEYQKNFGE-SWRTAQADNMQPWPYLNEALNKYQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLSAASQMFYKQAKKTNQCCTIL 741 V+L A DVS F +FQRSSV+EF+ F ++ + +R+ G R SV+ +EY H Y R+ L + D YP R +F+LL +VLDE+ K W + + L+ L++YQ+P EAD + K+Q ELDETKIILH T++S+L RGEKLD LV KS L S+ FYK A+K N CC I+ Sbjct: 17 VLLKAAYDVSSFSFFQRSSVQEFMTFTSQLIVERSAKGSRASVKEQEYLCHVYVRSDSLAGVVIADSEYPSRVAFTLLEKVLDEFSKQVDRIDWPVGSPATIH-YTALDGHLSRYQNPREADPMSKVQAELDETKIILHNTMESLLERGEKLDDLVSKSEVLGTQSKAFYKTARKQNSCCAIM 198
BLAST of CN188809 vs. ExPASy Swiss-Prot
Match: YKT6B_XENLA (Synaptobrevin homolog YKT6-B OS=Xenopus laevis GN=ykt6-B PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.040e-37 Identity = 89/202 (44.06%), Postives = 126/202 (62.38%), Query Frame = -1 Query: 199 MKITALLVLKCNPDGSDPV-VLATAMDVSHFGYFQRSSVKEFILFVARTVGKRTPPGQRQSVQHEEYKVHSYNRN-GLCAMGFMDDHYPVRSSFSLLNQVLDEYQKNFGE-SWRTAQADNMQPWPYLNEALNKYQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLSAASQMFYKQAKKTNQCCTIL 795 MK+ +L VL G + V +L +A DVS F +FQRSSV+EF+ F ++ + +R+ G R SV+ +EY H Y RN L + D+ YP R F+LL +VL+E+ W + +Q + L+ L+KYQ+P +AD + K+Q ELDETKI+LH T++S+L RGEKLD LV KS L S+ FYK A+K N CC I+ Sbjct: 1 MKLYSLSVLY---KGENKVHLLKSAYDVSSFSFFQRSSVQEFMTFTSQLIVERSDKGSRSSVKEQEYLCHVYVRNDSLAGVVIADNEYPPRVCFTLLEKVLEEFSTQVDRIDWPSGSPATIQ-YNALDSYLSKYQNPRDADPMSKVQAELDETKIVLHNTMESLLQRGEKLDDLVSKSEVLGTQSKAFYKTARKQNSCCDIM 198
BLAST of CN188809 vs. ExPASy Swiss-Prot
Match: YKT6A_XENLA (Synaptobrevin homolog YKT6-A OS=Xenopus laevis GN=ykt6-A PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.040e-37 Identity = 89/202 (44.06%), Postives = 126/202 (62.38%), Query Frame = -1 Query: 199 MKITALLVLKCNPDGSDPV-VLATAMDVSHFGYFQRSSVKEFILFVARTVGKRTPPGQRQSVQHEEYKVHSYNRN-GLCAMGFMDDHYPVRSSFSLLNQVLDEYQKNFGE-SWRTAQADNMQPWPYLNEALNKYQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLSAASQMFYKQAKKTNQCCTIL 795 MK+ +L VL G + V +L +A DVS F +FQRSS++EF+ F ++ + +R+ G R SV+ +EY H Y RN L + D+ YP R F+LL +VL+E+ W + +Q + L+ L+KYQ+P +AD + K+Q ELDETKIILH T++S+L RGEKLD LV KS L S+ FYK A+K N CC I+ Sbjct: 1 MKLYSLSVLY---KGENKVHLLKSAYDVSSFSFFQRSSIQEFMAFTSQLIVERSDKGSRSSVKEQEYLCHVYVRNDSLAGVVIADNEYPPRVCFTLLEKVLEEFSTQVDRIDWPSGSPATIQ-YNALDSYLSKYQNPRDADPMSKVQAELDETKIILHNTMESLLQRGEKLDDLVSKSEVLGTQSKAFYKTARKQNSCCDIM 198
BLAST of CN188809 vs. ExPASy Swiss-Prot
Match: YKT6_XENTR (Synaptobrevin homolog YKT6 OS=Xenopus tropicalis GN=ykt6 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.971e-37 Identity = 89/202 (44.06%), Postives = 126/202 (62.38%), Query Frame = -1 Query: 199 MKITALLVLKCNPDGSDPV-VLATAMDVSHFGYFQRSSVKEFILFVARTVGKRTPPGQRQSVQHEEYKVHSYNRN-GLCAMGFMDDHYPVRSSFSLLNQVLDEYQKNFGE-SWRTAQADNMQPWPYLNEALNKYQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLSAASQMFYKQAKKTNQCCTIL 795 MK+ +L VL G + V +L +A DVS F +FQRSS++EF+ F ++ + +R+ G R SV+ +EY H Y RN L + D+ YP R F+LL +VL+E+ W + +Q + L+ L+KYQ+P +AD + K+Q ELDETKIILH T++S+L RGEKLD LV KS L S+ FYK A+K N CC I+ Sbjct: 1 MKLYSLSVLY---KGDNKVSLLKSAYDVSSFSFFQRSSIQEFMAFTSQLIVERSDKGSRSSVKEQEYLCHVYVRNDSLAGVVIADNEYPPRVCFTLLEKVLEEFSTQVDRIDWPSGSPATIQ-YNALDSYLSKYQNPRDADPMSKVQAELDETKIILHNTMESLLQRGEKLDDLVSKSEVLGTQSKAFYKTARKQNSCCGIM 198
BLAST of CN188809 vs. ExPASy Swiss-Prot
Match: YKT6_DANRE (Synaptobrevin homolog YKT6 OS=Danio rerio GN=ykt6 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.155e-36 Identity = 87/201 (43.28%), Postives = 123/201 (61.19%), Query Frame = -1 Query: 199 MKITALLVLKCNPDGSDPVVLATAMDVSHFGYFQRSSVKEFILFVARTVGKRTPPGQRQSVQHEEYKVHSYNRN-GLCAMGFMDDHYPVRSSFSLLNQVLDEYQKNFGE-SWRTAQADNMQPWPYLNEALNKYQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLSAASQMFYKQAKKTNQCCTIL 795 MK+ +L VL + + +L D+S F +FQRSSV+EF+ F + + +R+ G R SV+ +EY H Y RN L + D YP R F+LL++VLDE+ + W + +Q + L+ L +YQ+P EAD + K+Q ELDETKIILH T++S+L RGEKLD LV+KS L S+ FYK A+K N CC I+ Sbjct: 1 MKLYSLSVL--HKGSTKANLLKATYDLSSFSFFQRSSVQEFMTFTSALIVERSALGSRASVKEQEYLCHVYVRNDNLGGVVIADSEYPSRVCFTLLDKVLDEFSRQVNSIDWPSGSPATIQ-YTALDSHLARYQNPREADAMTKVQAELDETKIILHNTMESLLERGEKLDDLVQKSEHLGNQSKAFYKTARKQNSCCEIM 198
BLAST of CN188809 vs. ExPASy Swiss-Prot
Match: YKT6_DICDI (Putative synaptobrevin homolog YKT6 OS=Dictyostelium discoideum GN=ykt6 PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 9.473e-31 Identity = 79/200 (39.50%), Postives = 117/200 (58.50%), Query Frame = -1 Query: 208 MKITALLVLKCNPDGSDPVVLATAMDVSHFGYFQRSSVKEFILFVARTVGKRTPPGQRQSVQHEEYKVHSY---NRNGLCAMGFMDDHYPVRSSFSLLNQVLDEYQKNFGES-WRTAQADNMQPWPYLNEALNKYQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLSAASQMFYKQAKKTNQCC 795 MK+ ++ + K P G+ PV+L ++S FG+FQR SVKE LFV+R RT G+R S++H + + + + GL D YP R + +L+ L+E+ K ES WR Q+D P L++ L KYQ+P AD ++ +Q+ LDET I+ KT++ + RGEKLD L KS DLS S+ F A++ N+CC Sbjct: 1 MKVYSIGLFKVVP-GNKPVLLNIVYELSSFGFFQRGSVKEVSLFVSRETVGRTNVGERVSMEHTQTQKVCHTTVDSKGLGCSVLTDSEYPGRVAHTLIRICLEEFYKVHPESEWRGLQSDVELQTPALDQLLLKYQNPETADPMMNLQKNLDETITIVKKTVEQLGQRGEKLDDLAAKSDDLSFQSKAFMNNAERMNKCC 199
BLAST of CN188809 vs. ExPASy Swiss-Prot
Match: SEC22_SCHPO (Protein transport protein sec22 OS=Schizosaccharomyces pombe GN=sec22 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.592e-12 Identity = 43/156 (27.56%), Postives = 79/156 (50.64%), Query Frame = -1 Query: 217 ARTVGKRTPPG--QRQSVQHEEYKVHSYNRNGLCAMGFMDDHYPVRSSFSLLNQVLDEYQKNFGESWRTAQADNMQPWPY------LNEALNKYQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLSAASQMFYKQAKKTN 660 A+ + KR P +R S++ +Y H NG+C + + YP + +FS L ++ E+ +FGE A ++P+ + + ++ Y P D L K+ EL + ++ K I+ +L RG+ L+ + + SSDL +S + K A++ N Sbjct: 29 AKLILKRLSPTSEKRASIESGDYTFHYLIDNGICYLCICEQSYPRKLAFSYLEELAGEFWNSFGEE---ALQPGLRPYAFVQFDTFMQKSKRVYNTPRANDNLDKLNTELKDVTRVMTKNIEDLLYRGDSLEKMADLSSDLRYSSAKYKKAARRVN 181 The following BLAST results are available for this feature:
BLAST of CN188809 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188809 ID=CN188809; Name=CN188809; organism=Citrus sinensis; type=EST; length=813bpback to top |