CN188807
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188807 vs. ExPASy Swiss-Prot
Match: UBIQ_LEIMA (Ubiquitin OS=Leishmania major GN=UB-EP52 PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.800e-33 Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = -3 Query: 389 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 616 MQIFVKTLTGKTI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 130.954 bits (328), Expect = 8.430e-30 Identity = 65/70 (92.86%), Postives = 68/70 (97.14%), Query Frame = -3 Query: 179 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 388 MQIFVKTLTGKTI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTL+DYNIQKESTLHLV Sbjct: 1 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLV 70
BLAST of CN188807 vs. ExPASy Swiss-Prot
Match: UBIQ_LEITA (Ubiquitin OS=Leishmania tarentolae GN=UB-EP52 PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 9.007e-32 Identity = 69/76 (90.79%), Postives = 72/76 (94.74%), Query Frame = -3 Query: 389 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 616 MQIFVKTLTG TI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFA KQLE+GRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGTTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 125.946 bits (315), Expect = 2.712e-28 Identity = 63/70 (90.00%), Postives = 66/70 (94.29%), Query Frame = -3 Query: 179 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 388 MQIFVKTLTG TI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFA KQLE+GRTL+DYNIQKESTLHLV Sbjct: 1 MQIFVKTLTGTTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLV 70
BLAST of CN188807 vs. ExPASy Swiss-Prot
Match: UBIL_NPVOP (Ubiquitin-like protein OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=V-UBI PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.626e-28 Identity = 61/76 (80.26%), Postives = 67/76 (88.16%), Query Frame = -3 Query: 389 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 616 MQIFVKTLTGKTIT+E E DT+ VK KI DKEG+P DQQRLI+AGKQLED +TLADYNIQKESTLH+VLRLRGG Sbjct: 1 MQIFVKTLTGKTITVETEPGDTVGQVKQKIADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGG 76 HSP 2 Score: 113.62 bits (283), Expect = 1.393e-24 Identity = 55/70 (78.57%), Postives = 61/70 (87.14%), Query Frame = -3 Query: 179 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 388 MQIFVKTLTGKTIT+E E DT+ VK KI DKEG+P DQQRLI+AGKQLED +TLADYNIQKESTLH+V Sbjct: 1 MQIFVKTLTGKTITVETEPGDTVGQVKQKIADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMV 70
BLAST of CN188807 vs. ExPASy Swiss-Prot
Match: UBIL_NPVAC (Ubiquitin-like protein OS=Autographa californica nuclear polyhedrosis virus GN=V-UBI PE=3 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.998e-27 Identity = 58/76 (76.32%), Postives = 68/76 (89.47%), Query Frame = -3 Query: 389 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 616 MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG Sbjct: 1 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 76 HSP 2 Score: 110.923 bits (276), Expect = 9.028e-24 Identity = 52/70 (74.29%), Postives = 62/70 (88.57%), Query Frame = -3 Query: 179 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 388 MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+V Sbjct: 1 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMV 70
BLAST of CN188807 vs. ExPASy Swiss-Prot
Match: UBIQ_LUMTE (Ubiquitin (Fragment) OS=Lumbricus terrestris PE=1 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 1.139e-26 Identity = 60/63 (95.24%), Postives = 62/63 (98.41%), Query Frame = -3 Query: 395 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 583 TITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLR Sbjct: 1 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 63 HSP 2 Score: 113.62 bits (283), Expect = 1.393e-24 Identity = 56/59 (94.92%), Postives = 58/59 (98.31%), Query Frame = -3 Query: 179 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 355 TITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV Sbjct: 1 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 59
BLAST of CN188807 vs. ExPASy Swiss-Prot
Match: RUB1_DESAN (NEDD8-like protein RUB1 OS=Deschampsia antarctica GN=RUB1 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.718e-20 Identity = 48/74 (64.86%), Postives = 59/74 (79.73%), Query Frame = -3 Query: 389 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 610 I VKTLTGK I +++E +DTID VK ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76 HSP 2 Score: 90.1225 bits (222), Expect = 1.649e-17 Identity = 43/68 (63.24%), Postives = 54/68 (79.41%), Query Frame = -3 Query: 179 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 382 I VKTLTGK I +++E +DTID VK ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLV Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLV 70
BLAST of CN188807 vs. ExPASy Swiss-Prot
Match: RUB2_ORYSJ (NEDD8-like protein RUB2 OS=Oryza sativa subsp. japonica GN=RUB2 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.550e-20 Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = -3 Query: 389 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 610 I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76 HSP 2 Score: 89.7373 bits (221), Expect = 2.154e-17 Identity = 42/68 (61.76%), Postives = 54/68 (79.41%), Query Frame = -3 Query: 179 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 382 I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLV Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLV 70
BLAST of CN188807 vs. ExPASy Swiss-Prot
Match: RUB1_ORYSJ (NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica GN=RUB1 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.550e-20 Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = -3 Query: 389 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 610 I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76 HSP 2 Score: 89.7373 bits (221), Expect = 2.154e-17 Identity = 42/68 (61.76%), Postives = 54/68 (79.41%), Query Frame = -3 Query: 179 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 382 I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLV Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLV 70
BLAST of CN188807 vs. ExPASy Swiss-Prot
Match: RUB1_ARATH (NEDD8-like protein RUB1 OS=Arabidopsis thaliana GN=RUB1 PE=1 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 3.550e-20 Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = -3 Query: 389 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 610 I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76 HSP 2 Score: 89.7373 bits (221), Expect = 2.154e-17 Identity = 42/68 (61.76%), Postives = 54/68 (79.41%), Query Frame = -3 Query: 179 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 382 I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLV Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLV 70
BLAST of CN188807 vs. ExPASy Swiss-Prot
Match: NEDD8_DROME (NEDD8 OS=Drosophila melanogaster GN=Nedd8 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.550e-20 Identity = 46/79 (58.23%), Postives = 60/79 (75.95%), Query Frame = -3 Query: 380 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQI 616 M I VKTLTGK I +++E +D +D +K ++++KEGIPP QQRLIF+GKQ+ D +T ADY +Q S LHLVL LRGG I Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVDRIKERVEEKEGIPPQQQRLIFSGKQMNDDKTAADYKVQGGSVLHLVLALRGGDSI 79 HSP 2 Score: 89.3521 bits (220), Expect = 2.813e-17 Identity = 40/70 (57.14%), Postives = 54/70 (77.14%), Query Frame = -3 Query: 179 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 388 M I VKTLTGK I +++E +D +D +K ++++KEGIPP QQRLIF+GKQ+ D +T ADY +Q S LHLV Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVDRIKERVEEKEGIPPQQQRLIFSGKQMNDDKTAADYKVQGGSVLHLV 70 The following BLAST results are available for this feature:
BLAST of CN188807 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188807 ID=CN188807; Name=CN188807; organism=Citrus sinensis; type=EST; length=840bpback to top |