CN188801
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_STRR6 (Superoxide dismutase [Mn] OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=sodA PE=3 SV=2) HSP 1 Score: 164.466 bits (415), Expect = 5.957e-40 Identity = 86/202 (42.57%), Postives = 120/202 (59.41%), Query Frame = 3 Query: 111 VTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQL------FQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 698 + LP+LPY Y ALEP I E M LHH + HQ YV N N A+E+ +AL S ++ A+ NGGGH+NH++FW+ + P P + L AIDA FGS E +A GSGW WL ++ E K L V +TANQD +++ P+LG+DVWEHAYY++Y+NV+PDY+K ++V+NW ++Y Sbjct: 3 IILPELPYAYDALEPYIDAETMHLHHDKHHQTYVNNANAALEKHPEIGEDLEALLADVESIPADIRQALINNGGGHLNHALFWELMTPEKTA----PSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWLVVNKEGK-LEVTSTANQDTPISEGKK--PILGLDVWEHAYYVKYRNVRPDYIKAFFSVINWNKVDELY 197
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_STRPN (Superoxide dismutase [Mn] OS=Streptococcus pneumoniae GN=sodA PE=3 SV=2) HSP 1 Score: 164.466 bits (415), Expect = 5.957e-40 Identity = 86/202 (42.57%), Postives = 120/202 (59.41%), Query Frame = 3 Query: 111 VTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQL------FQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 698 + LP+LPY Y ALEP I E M LHH + HQ YV N N A+E+ +AL S ++ A+ NGGGH+NH++FW+ + P P + L AIDA FGS E +A GSGW WL ++ E K L V +TANQD +++ P+LG+DVWEHAYY++Y+NV+PDY+K ++V+NW ++Y Sbjct: 3 IILPELPYAYDALEPYIDAETMHLHHDKHHQTYVNNANAALEKHPEIGEDLEALLADVESIPADIRQALINNGGGHLNHALFWELMTPEKTA----PSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWLVVNKEGK-LEVTSTANQDTPISEGKK--PILGLDVWEHAYYVKYRNVRPDYIKAFFSVINWNKVDELY 197
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_DEIRA (Superoxide dismutase [Mn] OS=Deinococcus radiodurans GN=sodA PE=1 SV=3) HSP 1 Score: 164.081 bits (414), Expect = 7.781e-40 Identity = 94/210 (44.76%), Postives = 119/210 (56.67%), Query Frame = 3 Query: 114 TLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKA----------VEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVH-EGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKAPTLV---PLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 698 TLP LPY Y ALEP I M++HH + HQ YV N NKA VEQL Q L++V +GA++ N GGH NHS+FW+ + + G P L AI++ FGS +A QK GSGW WL + +L V +TANQD PL+ +A V P+LG+DVWEHAYYL Y+N +PDYL WNV+NW S Y Sbjct: 4 TLPQLPYAYDALEPHIDARTMEIHHTKHHQTYVDNANKALEGTEFADLPVEQLIQQLDRVPADK----KGALRNNAGGHANHSMFWQIMGQGQGQNGANQPSGELLDAINSAFGSFDAFKQKFEDAAKTRFGSGWAWLVVKDG--KLDVVSTANQDNPLMGEAIAGVSGTPILGVDVWEHAYYLNYQNRRPDYLAAFWNVVNWDEVSKRY 207
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_STAES (Superoxide dismutase [Mn/Fe] OS=Staphylococcus epidermidis (strain ATCC 12228) GN=sodA PE=1 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.327e-39 Identity = 83/200 (41.50%), Postives = 120/200 (60.00%), Query Frame = 3 Query: 117 LPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDT------STVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 698 LP+LPY Y ALEP I + M++HH + H YVT N AVE ++ S +Q A++ NGGGH+NHS+FW+ L+P E GE I +GSL+ ++ + + AA GSGW WL ++ +L + TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ +++Y Sbjct: 5 LPNLPYAYDALEPHIDKQTMEIHHDKHHNTYVTKLNSAVEGTDLEAKSIEEIVANLDSVPSNIQTAVRNNGGGHLNHSLFWELLSPNSEEKGEVVDK-----IKEQWGSLDEFKKEFADKAAARFGSGWAWLVVNNG--QLEIVTTPNQDNPITEGKT--PILGLDVWEHAYYLKYQNKRPDYINAFWNVVNWEKVNELY 195
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_STAEQ (Superoxide dismutase [Mn/Fe] OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=sodA PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.327e-39 Identity = 83/200 (41.50%), Postives = 120/200 (60.00%), Query Frame = 3 Query: 117 LPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDT------STVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 698 LP+LPY Y ALEP I + M++HH + H YVT N AVE ++ S +Q A++ NGGGH+NHS+FW+ L+P E GE I +GSL+ ++ + + AA GSGW WL ++ +L + TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ +++Y Sbjct: 5 LPNLPYAYDALEPHIDKQTMEIHHDKHHNTYVTKLNSAVEGTDLEAKSIEEIVANLDSVPSNIQTAVRNNGGGHLNHSLFWELLSPNSEEKGEVVDK-----IKEQWGSLDEFKKEFADKAAARFGSGWAWLVVNNG--QLEIVTTPNQDNPITEGKT--PILGLDVWEHAYYLKYQNKRPDYINAFWNVVNWEKVNELY 195
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_CHLRE (Superoxide dismutase [Mn], mitochondrial OS=Chlamydomonas reinhardtii GN=SODA PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.327e-39 Identity = 85/208 (40.87%), Postives = 123/208 (59.13%), Query Frame = 3 Query: 117 LPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQL--FQALNKVDTSTVV-------QLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKAPTL---VPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 701 LP LPYDY +LEP + M +HH + HQ YV N N A+++ + L VD + V + I+ NGGGH NHS FWK + G P+ + AI+A FGS++ + K +A A GSGW WL + + L +++T NQD PL+T P + +PLLG+DVWEHAYYL+Y+N +P+Y+ WNV+NW+ ++ Y+ Sbjct: 5 LPPLPYDYGSLEPHVDATTMNIHHTKHHQTYVNNLNAALDKFPELKDLGLVDLNKAVGTDKLPKDVATVIRNNGGGHYNHSFFWKVMTNPSNTNG--PNGDVKAAIEASFGSVDEMKAKFNAAAAGRFGSGWAWLSVKPDGS-LSIDSTPNQDNPLMTALPDVAGGIPLLGLDVWEHAYYLKYQNRRPEYIAAWWNVVNWEQVAENYK 209
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_LISIV (Superoxide dismutase [Mn] OS=Listeria ivanovii GN=sodA PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.733e-39 Identity = 81/197 (41.12%), Postives = 120/197 (60.91%), Query Frame = 3 Query: 108 TVTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQL-------QGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 677 T LP LPY Y ALEP E M++H+ + H YVT N+AV + +K V L +GA++ +GGGH NH++FW +L+P GG P +L AI++ FG+ + +K +A AA GSGW WL ++ +L + +TANQD +++ T P+LG+DVWEHAYYL+++N +P+Y+ WNV+NW Sbjct: 2 TYELPKLPYTYDALEPNFDKETMEIHYTKHHNIYVTKLNEAVSGHAELASKPGEELVANLDSVPEEIRGAVRNHGGGHANHTLFWSSLSP---NGGGAPTGNLKAAIESEFGTFDEFKEKFNAAAAARFGSGWAWLVVNNG--KLEIVSTANQDSPLSEGKT--PVLGLDVWEHAYYLKFQNRRPEYIDTFWNVINW 191
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_HAEIN (Superoxide dismutase [Mn] OS=Haemophilus influenzae GN=sodA PE=1 SV=2) HSP 1 Score: 162.925 bits (411), Expect = 1.733e-39 Identity = 84/209 (40.19%), Postives = 122/209 (58.37%), Query Frame = 3 Query: 114 TLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVV--------QLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLV---PLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKE 707 TLP+L Y Y+ALEP + M++HH + HQAYV N N A+E L L ++ ++ + +GA++ N GGH NHS+FWK+L G +L AI+ FGS++A + A GSGW WL L E K VV T +PL+ K PLLG+DVWEHAYYL+++N +PDY+K WNV+NW + ++ ++++ Sbjct: 4 TLPELGYAYNALEPHFDAQTMEIHHSKHHQAYVNNANAALEGLPAELVEMYPGHLISNLDKIPAEKRGALRNNAGGHTNHSLFWKSLKK-----GTTLQGALKDAIERDFGSVDAFKAEFEKAAATRFGSGWAWLVLTAEGKLAVVSTANQDNPLMGKEVAGCEGFPLLGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDFVAERFEQK 207
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM1_BACCR (Superoxide dismutase [Mn] 1 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=sodA1 PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.861e-39 Identity = 86/203 (42.36%), Postives = 119/203 (58.62%), Query Frame = 3 Query: 129 PYDYSALEPAISGEIMQLHHQRRHQAYVTNYN-----------KAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 704 PY Y ALEP E M +HH + H Y+TN N K+VE+L LN+V + ++ A++ NGGGH NH+ FW L+P GGG+P L AI+A FGS +A ++ + GA GSGW WL ++ L V +T NQD +T+ T P++G+DVWEHAYYL Y+N +PDY+ WNV++W A YQ+ Sbjct: 25 PYAYDALEPHFDKETMNIHHTKHHNTYITNLNAALEGHAELADKSVEELVANLNEVPEA----IRTAVRNNGGGHANHTFFWTILSP--NGGGQPV-GELATAIEAKFGSFDAFKEEFAKAGATRFGSGWAWLVVNNG--ELEVTSTPNQDSPLTEGKT--PVIGLDVWEHAYYLNYQNRRPDYIGAFWNVVDWNAAEKRYQE 216
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_STACA (Superoxide dismutase [Mn/Fe] OS=Staphylococcus carnosus GN=sodA PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 8.602e-39 Identity = 82/202 (40.59%), Postives = 120/202 (59.41%), Query Frame = 3 Query: 117 LPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVE-------QLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 701 LP+LPY++ ALEP I E M++HH + H YVT N A+E + + + +D S +Q A++ NGGGH+NHS+FW+ L P E G I +GSL+ + + + A GSGW WL +D + K L + +T NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW ++Y+ Sbjct: 5 LPNLPYEFDALEPYIDKETMEIHHDKHHNTYVTKLNAAIEGTDLENKSIEEIVANLD-SVPSDIQTAVRNNGGGHLNHSLFWQLLTPNSEEKGTVIDK-----IKEEWGSLDKFKDEFAKKAAGQFGSGWAWLVVDKDGK-LEIVSTPNQDNPITEGKT--PILGLDVWEHAYYLKYQNKRPDYIDAFWNVVNWNKVDELYE 197 The following BLAST results are available for this feature:
BLAST of CN188801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188801 ID=CN188801; Name=CN188801; organism=Citrus sinensis; type=EST; length=773bpback to top |