CN181495

Overview
NameCN181495
Unique NameCN181495
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length661
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig239 contig Csv1_Contig239:479..1139. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: AQP8_NOTAL (Aquaporin-8 OS=Notomys alexis GN=AQP8 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.674e-18
Identity = 52/135 (38.52%), Postives = 78/135 (57.78%), Query Frame = -1
Query:  275 AQLLGSTVACLLLKFVTNGQ-----TTSAFAL-SSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFF 661
            +Q+ G  +   L K V+  +     + +AFA+         A+  EI++T  LV  V   A++ K  ++G +AP +IGF V  +ILAGG   GA MNPA +FGPA+V+  WD HW+YW+GPL+ G   G++   F
Sbjct:  116 SQIFGGLIGAALAKVVSPEERFWNASGAAFAIVQEQEQVTEALGVEIILTILLVLAVCMGAVNEK--TMGPLAPFSIGFSVIVDILAGGGISGACMNPARAFGPAVVAGYWDFHWIYWLGPLLAGLFVGLLIRLF 248          
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: AQP1_MOUSE (Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3)

HSP 1 Score: 92.4337 bits (228), Expect = 2.186e-18
Identity = 51/139 (36.69%), Postives = 79/139 (56.83%), Query Frame = -1
Query:  254 AQLLGSTVACLLLKFVTNGQTTSAFA---LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHE 661
            AQ +G+ VA  +L  +T+    ++     L+ GV +   +  EI+ T  LV  V AT  D ++  LG  AP+AIG  V    L    + G  +NPA SFG A+++ ++ NHW++WVGP IGG LA ++Y+F    +S +
Sbjct:  100 AQCVGAIVATAILSGITSSLVDNSLGRNDLAHGVNSGQGLGIEIIGTLQLVLCVLATT-DRRRRDLGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVLTRNFSNHWIFWVGPFIGGALAVLIYDFILAPRSSD 237          
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: AQPA_RANES (Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.855e-18
Identity = 51/131 (38.93%), Postives = 75/131 (57.25%), Query Frame = -1
Query:  278 AQLLGSTVACLLLKFVTNGQTTSAFAL---SSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 661
            AQ LG+ VA  +L  +T+G   ++  L   S GV A   +  EI++TF LV  V A   D ++  +    P+AIG  V    L    + G  MNPA SFG A+++ ++  HW++WVGP+IGG  A I+Y+F
Sbjct:  104 AQCLGAVVATAILSGITSGLENNSLGLNGLSPGVSAGQGLGVEILVTFQLVLCVVAVT-DRRRHDVSGSVPLAIGLSVALGHLIAIDYTGCGMNPARSFGSAVLTKNFTYHWIFWVGPMIGGAAAAIIYDF 233          
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: AQP1_SHEEP (Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 4.870e-18
Identity = 48/139 (34.53%), Postives = 79/139 (56.83%), Query Frame = -1
Query:  254 AQLLGSTVACLLLKFVTNGQTTSAF---ALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHE 661
            AQ +G+ VA ++L  +T+    ++    AL+ GV +   +  EI+ T  LV  V AT    ++  LG   P+AIGF V    L    + G  +NPA SFG ++++ ++ +HW++WVGP IG  LA ++Y+F    +S +
Sbjct:  102 AQCVGAIVATVILSGITSSLPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRRDLGDSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITHNFQDHWIFWVGPFIGAALAVLIYDFILAPRSSD 240          
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: AQP8_MOUSE (Aquaporin-8 OS=Mus musculus GN=Aqp8 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.361e-18
Identity = 51/131 (38.93%), Postives = 78/131 (59.54%), Query Frame = -1
Query:  287 AQLLGSTVACLLLKFVTNGQ-----TTSAFAL-SSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIV 661
            +QL G  +   L K V+  +     + +AFA+         A+  EI++T  LV  V   A++ K  ++G +AP +IGF V  +ILAGG+  GA MNPA +FGPA+++  WD HW+YW+GPL+ G   G++
Sbjct:  116 SQLFGGLIGAALAKVVSPEERFWNASGAAFAIVQEQEQVAEALGIEIILTMLLVLAVCMGAVNEK--TMGPLAPFSIGFSVIVDILAGGSISGACMNPARAFGPAVMAGYWDFHWIYWLGPLLAGLFVGLL 244          
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: AQP_HAEIX (Aquaporin OS=Haematobia irritans exigua PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.085e-17
Identity = 48/128 (37.50%), Postives = 72/128 (56.25%), Query Frame = -1
Query:  272 LLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFF 655
            + G+ V  + +    +G      + SS +    AV+ E ++TF LV  V   + DP +  +   AP+A+G  + A  L      GASMNPA SFGPA+V   W +HWVYWVGP++G  +A ++Y+F F
Sbjct:  111 IAGAAVIKVGVSEAVSGLDLGVSSFSSTLTVGQAVLIEALITFILVVVVKGVS-DPGRTDIKGSAPLAVGLSIAAGHLCAIKLTGASMNPARSFGPAVVQNMWIDHWVYWVGPIVGAIVAALLYKFVF 237          
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: AQP1_BOVIN (Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3)

HSP 1 Score: 90.1225 bits (222), Expect = 1.085e-17
Identity = 49/139 (35.25%), Postives = 79/139 (56.83%), Query Frame = -1
Query:  254 AQLLGSTVACLLLKFVTNGQTTSAF---ALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHE 661
            AQ +G+ VA  +L  +T+    ++    AL+ GV +   +  EI+ T  LV  V AT  D ++  LG   P+AIGF V    L    + G  +NPA SFG ++++ ++ +HW++WVGP IG  LA ++Y+F    +S +
Sbjct:  102 AQCVGAIVATAILSGITSSLPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATT-DRRRRDLGGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITHNFQDHWIFWVGPFIGAALAVLIYDFILAPRSSD 239          
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: AQP1_RAT (Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4)

HSP 1 Score: 89.7373 bits (221), Expect = 1.417e-17
Identity = 50/139 (35.97%), Postives = 78/139 (56.12%), Query Frame = -1
Query:  254 AQLLGSTVACLLLKFVTNGQTTSAFA---LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHE 661
            AQ +G+ VA  +L  +T+    ++     L+ GV +   +  EI+ T  LV  V AT  D ++  LG  AP+AIG  V    L    + G  +NPA SFG A+++ ++ NHW++WVGP IG  LA ++Y+F    +S +
Sbjct:  100 AQCVGAIVASAILSGITSSLLENSLGRNDLARGVNSGQGLGIEIIGTLQLVLCVLATT-DRRRRDLGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVLTRNFSNHWIFWVGPFIGSALAVLIYDFILAPRSSD 237          
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: AQP_CICVR (Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.851e-17
Identity = 52/140 (37.14%), Postives = 77/140 (55.00%), Query Frame = -1
Query:  251 QLLGSTVACLLLKFVTNGQ---TTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSW-SWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQ 658
            Q +G+     +LK +T  +   T    +L+ GV      + E  +TF L+  V +   D +K +LG  AP+A+G  +    LA   + G+SMNPA SFGPA+    +W NHWVYW GP++GG +AGI Y   F  +  E+
Sbjct:  110 QCVGAIAGSAILKVITPAEFRGTLCMTSLAPGVTPPMGFLVEACITFVLILLVQSVCDDRRK-NLGNAAPVAVGLAITCCHLAAIKYTGSSMNPARSFGPAVNGDDNWANHWVYWAGPIVGGVVAGITYRALFRARKPEE 248          
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: AQP8_HUMAN (Aquaporin-8 OS=Homo sapiens GN=AQP8 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 1.851e-17
Identity = 53/135 (39.26%), Postives = 77/135 (57.04%), Query Frame = -1
Query:  275 AQLLGSTVACLLLKFVTNGQ-----TTSAFALSSGVG-AWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFF 661
            +QLLG  +   L K V+  +     + +AF      G    A+V EI++T  L   V   A++ K  + G +AP +IGF V  +ILAGG   G  MNPA +FGPA+V+  W+ HW+YW+GPL+ G L G++   F
Sbjct:  116 SQLLGGMLGAALAKAVSPEERFWNASGAAFVTVQEQGQVAGALVAEIILTTLLALAVCMGAINEK--TKGPLAPFSIGFAVTVDILAGGPVSGGCMNPARAFGPAVVANHWNFHWIYWLGPLLAGLLVGLLIRCF 248          
The following BLAST results are available for this feature:
BLAST of CN181495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 148
Match NameE-valueIdentityDescription
AQP8_NOTAL1.674e-1838.52Aquaporin-8 OS=Notomys alexis GN=AQP8 PE=2 SV=1[more]
AQP1_MOUSE2.186e-1836.69Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3[more]
AQPA_RANES2.855e-1838.93Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 S... [more]
AQP1_SHEEP4.870e-1834.53Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3[more]
AQP8_MOUSE6.361e-1838.93Aquaporin-8 OS=Mus musculus GN=Aqp8 PE=2 SV=1[more]
AQP_HAEIX1.085e-1737.50Aquaporin OS=Haematobia irritans exigua PE=2 SV=1[more]
AQP1_BOVIN1.085e-1735.25Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3[more]
AQP1_RAT1.417e-1735.97Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4[more]
AQP_CICVR1.851e-1737.14Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 ... [more]
AQP8_HUMAN1.851e-1739.26Aquaporin-8 OS=Homo sapiens GN=AQP8 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001A13_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001A13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181495 ID=CN181495; Name=CN181495; organism=Citrus sinensis; type=EST; length=661bp
GAGGGGTTAATGAAATAGACATCAAGCCAATTGAAGCGAGAGTAGAAAGA
CAAAGCCATAGCCTGGGACTCCATAATTATCGCGATACAATAATCCAGCA
GCTCATGACGATGGAAACAGATCAACGGCCATAAATTAAACACAAATTAA
AAATAAAAAGAAAGAACCTCGGTAAAAGCAAATTAAATACAACATCCGTG
CAAACTCACATAGATGGCAAGCTTTTAGCTTAGTACTCGGTTGTTGGGAG
CTGCTCATGCGACTGGTTAATGAAGAAGAACTCGTAGACGATGCCAGCTA
GCCCACCACCGATGAGTGGCCCGACCCAGTAGACCCAGTGGTTGTCCCAG
CTCCAGCTCACCAAAGCTGGCCCGAATGACACTGCTGGGTTCATTGAAGC
TCCATCAAACGCCCCGCCCGCCAAGATGTTGGCTCCTACAATGAAACCAA
TTGCAATTGGTGCAATTGTCCCCAAGCTTCCCTTCTTTGGGTCCAGGGCT
GTGGCATACACTGTGTACACTAGTCCGAATGTCATCACGATCTCGAAAAC
GACTGCGTTCCATGCACCAACTCCAGATGAGAGAGCAAAAGCAGATGTGG
TCTGGCCGTTGGTAACGAACTTAAGAAGCAAGCATGCGACGGTGGATCCA
AGAAGCTGGGC
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