CN181495

Overview
NameCN181495
Unique NameCN181495
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length661
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig239 contig Csv1_Contig239:479..1139. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: AQP1_CANFA (Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3)

HSP 1 Score: 88.1965 bits (217), Expect = 4.123e-17
Identity = 48/139 (34.53%), Postives = 78/139 (56.12%), Query Frame = -1
Query:  254 AQLLGSTVACLLLKFVTNGQTTSAFA---LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHE 661
            AQ +G+ VA  +L  +T+    ++     L+ GV +   +  EI+ T  LV  V AT  D ++  LG   P+AIG  V    L    + G  +NPA SFG ++++ ++ +HW++WVGP IGG LA ++Y+F    +S +
Sbjct:  102 AQCVGAIVATAILSGITSSLPDNSLGRNELAPGVNSGQGLGIEIIGTLQLVLCVLATT-DRRRRDLGGSGPLAIGLSVALGHLLAIDYTGCGINPARSFGSSVITHNFKDHWIFWVGPFIGGALAVLIYDFILAPRSSD 239          
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: AQP2_HUMAN (Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.200e-16
Identity = 48/131 (36.64%), Postives = 71/131 (54.20%), Query Frame = -1
Query:  278 AQLLGSTVACLLLKFVTNGQTTSAFA---LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 661
            AQLLG+     LL  +T        A   LS+   A  AV  E+ +T  LV  ++A+  D ++G       ++IGF V    L G  + G SMNPA S  PA+V+  +D+HWV+W+GPL+G  L  ++Y +
Sbjct:   92 AQLLGAVAGAALLHEITPADIRGDLAVNALSNSTTAGQAVTVELFLTLQLVLCIFAST-DERRGENPGTPALSIGFSVALGHLLGIHYTGCSMNPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNY 221          
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.567e-16
Identity = 49/130 (37.69%), Postives = 71/130 (54.62%), Query Frame = -1
Query:  281 AQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYE 661
            AQLLG+     +L  VT         LS+    VG     V E+++T   +  V+A+  D   G  G+ A + +GF +    L G  F GA MNPA SF PA+++ ++ NHWV+W GPL+G  LA ++YE
Sbjct:   92 AQLLGALAGAGVLYGVTPAAVRGTLGLSALHPSVGPGQGTVVELLLTAQFILCVFASFDDRHDGRPGSAA-LPVGFSLALGHLFGIPFTGAGMNPARSFAPAVITRNFTNHWVFWAGPLLGAALAALLYE 220          
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: NIP42_ARATH (Probable aquaporin NIP4-2 OS=Arabidopsis thaliana GN=NIP4-2 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.046e-16
Identity = 48/128 (37.50%), Postives = 70/128 (54.69%), Query Frame = -1
Query:  278 AQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 661
            AQL GS +A L L+ + N    + F  +    +  A+V EI+++F L++ +   A D +  + G +A IA+G  +  N+   G   GASMNPA S GPA+V   +   WVY VGP +G    G VY F
Sbjct:  126 AQLTGSLLASLTLRLMFNVTPKAFFGTTPTDSSGQALVAEIIISFLLMFVISGVATDSR--ATGELAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMGRYKGIWVYIVGPFVGIFAGGFVYNF 251          
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: AQP2_BOVIN (Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.046e-16
Identity = 48/131 (36.64%), Postives = 75/131 (57.25%), Query Frame = -1
Query:  278 AQLLGSTVACLLLKFVTNGQTTSAFA---LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 661
            AQLLG+     LL  +T        A   L++   A  AV  E+ +T  LV  ++A+  + +  ++GT A ++IGF V    L G  + G SMNPA S  PA+V+  +D+HWV+W+GPL+G  +A ++Y +
Sbjct:   92 AQLLGAVAGAALLHEITPPAIRGDLAVNALNNNSTAGQAVTVELFLTLQLVLCIFASTDERRGDNVGTPA-LSIGFSVALGHLLGIHYTGCSMNPARSLAPAIVTGKFDDHWVFWIGPLVGAIVASLLYNY 221          
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: AQP6_RAT (Aquaporin-6 OS=Rattus norvegicus GN=Aqp6 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.672e-16
Identity = 54/131 (41.22%), Postives = 75/131 (57.25%), Query Frame = -1
Query:  278 AQLLGSTVACLLLKFVTNG---QTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 661
            AQL G+TV   LL  VT G   +T     + +      AV  E+V+T  LV  V+A+ +D ++ +LG+ A + IG  V    L G  F G SMNPA SFGPA++   +  HW++WVGPL G  LA ++Y F
Sbjct:  103 AQLAGATVGAALLYGVTPGGVRETLGVNVVHNSTSTGQAVAVELVLTLQLVLCVFAS-MDSRQ-TLGSPAAM-IGTSVALGHLIGIYFTGCSMNPARSFGPAVIVGKFAVHWIFWVGPLTGAVLASLIYNF 230          
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: AQP2_MOUSE (Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 2.672e-16
Identity = 47/131 (35.88%), Postives = 74/131 (56.49%), Query Frame = -1
Query:  278 AQLLGSTVACLLLKFVTNGQTTSAFA---LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 661
            AQLLG+     +L  +T  +     A   L +   A  AV  E+ +T  LV  ++A+  + +  +LG+ A ++IGF V    L G  F G SMNPA S  PA+V+  +D+HWV+W+GPL+G  +  ++Y +
Sbjct:   92 AQLLGAVAGAAILHEITPVEIRGDLAVNALHNNATAGQAVTVELFLTMQLVLCIFASTDERRSDNLGSPA-LSIGFSVTLGHLLGIYFTGCSMNPARSLAPAVVTGKFDDHWVFWIGPLVGAVIGSLLYNY 221          
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: AQP6_HUMAN (Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 5.954e-16
Identity = 54/131 (41.22%), Postives = 75/131 (57.25%), Query Frame = -1
Query:  278 AQLLGSTVACLLLKFVTNG---QTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 661
            AQL+G+TV   LL  V  G   +T     + + V    AV  E+++T  LV  V+A+  D ++ S G+ A + IG  V    L G  F G SMNPA SFGPA++   +  HWV+WVGPL+G  LA ++Y F
Sbjct:  106 AQLVGATVGAALLYGVMPGDIRETLGINVVRNSVSTGQAVAVELLLTLQLVLCVFAST-DSRQTS-GSPATM-IGISVALGHLIGIHFTGCSMNPARSFGPAIIIGKFTVHWVFWVGPLMGALLASLIYNF 233          
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: AQP2_RAT (Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.954e-16
Identity = 47/131 (35.88%), Postives = 74/131 (56.49%), Query Frame = -1
Query:  278 AQLLGSTVACLLLKFVTNGQTTSAFA---LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 661
            AQLLG+     +L  +T  +     A   L +   A  AV  E+ +T  LV  ++A+  + +  +LG+ A ++IGF V    L G  F G SMNPA S  PA+V+  +D+HWV+W+GPL+G  +  ++Y +
Sbjct:   92 AQLLGAVAGAAILHEITPVEIRGDLAVNALHNNATAGQAVTVELFLTMQLVLCIFASTDERRGDNLGSPA-LSIGFSVTLGHLLGIYFTGCSMNPARSLAPAVVTGKFDDHWVFWIGPLVGAIIGSLLYNY 221          
BLAST of CN181495 vs. ExPASy Swiss-Prot
Match: PIP21_ARATH (Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.955e-15
Identity = 51/139 (36.69%), Postives = 74/139 (53.24%), Query Frame = -1
Query:  278 AQLLGSTVACLLLKFVTNGQTT----SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 661
            AQ LG+      +K   +   T     A +L+ G      +  EI+ TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA     G  +NPA SFG A++   S  WD+HW++WVGP IG  +A   ++F
Sbjct:  131 AQCLGAICGVGFVKAFQSSYYTRYGGGANSLADGYSTGTGLAAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKSKPWDDHWIFWVGPFIGAAIAAFYHQF 268          
The following BLAST results are available for this feature:
BLAST of CN181495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 148
Match NameE-valueIdentityDescription
AQP1_CANFA4.123e-1734.53Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3[more]
AQP2_HUMAN1.200e-1636.64Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1[more]
MIP_CHICK1.567e-1637.69Lens fiber major intrinsic protein OS=Gallus gallu... [more]
NIP42_ARATH2.046e-1637.50Probable aquaporin NIP4-2 OS=Arabidopsis thaliana ... [more]
AQP2_BOVIN2.046e-1636.64Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2[more]
AQP6_RAT2.672e-1641.22Aquaporin-6 OS=Rattus norvegicus GN=Aqp6 PE=1 SV=1[more]
AQP2_MOUSE2.672e-1635.88Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2[more]
AQP6_HUMAN5.954e-1641.22Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2[more]
AQP2_RAT5.954e-1635.88Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1[more]
PIP21_ARATH2.955e-1536.69Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001A13_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001A13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181495 ID=CN181495; Name=CN181495; organism=Citrus sinensis; type=EST; length=661bp
GAGGGGTTAATGAAATAGACATCAAGCCAATTGAAGCGAGAGTAGAAAGA
CAAAGCCATAGCCTGGGACTCCATAATTATCGCGATACAATAATCCAGCA
GCTCATGACGATGGAAACAGATCAACGGCCATAAATTAAACACAAATTAA
AAATAAAAAGAAAGAACCTCGGTAAAAGCAAATTAAATACAACATCCGTG
CAAACTCACATAGATGGCAAGCTTTTAGCTTAGTACTCGGTTGTTGGGAG
CTGCTCATGCGACTGGTTAATGAAGAAGAACTCGTAGACGATGCCAGCTA
GCCCACCACCGATGAGTGGCCCGACCCAGTAGACCCAGTGGTTGTCCCAG
CTCCAGCTCACCAAAGCTGGCCCGAATGACACTGCTGGGTTCATTGAAGC
TCCATCAAACGCCCCGCCCGCCAAGATGTTGGCTCCTACAATGAAACCAA
TTGCAATTGGTGCAATTGTCCCCAAGCTTCCCTTCTTTGGGTCCAGGGCT
GTGGCATACACTGTGTACACTAGTCCGAATGTCATCACGATCTCGAAAAC
GACTGCGTTCCATGCACCAACTCCAGATGAGAGAGCAAAAGCAGATGTGG
TCTGGCCGTTGGTAACGAACTTAAGAAGCAAGCATGCGACGGTGGATCCA
AGAAGCTGGGC
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