CN181489

Overview
NameCN181489
Unique NameCN181489
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length667
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2265 contig Csv1_Contig2265:607..1273. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181489 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.252e-20
Identity = 53/139 (38.13%), Postives = 81/139 (58.27%), Query Frame = -3
Query:   96 YPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQ----FTHTDYITRFFTKQLDGK 497
            YP CP+PDL  G+ +HTD G + +L QDDK  GLQ+     W+DV P+  ++V+N+GD L++++N +Y SV HRV+A      R+S+A F++P   D+L  P P L+  E     +Q    F   DY+  +   +   K
Sbjct:  162 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGRWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKD-GTRMSLASFYNPG-NDALIYPAPALVDKEAEEHNKQVYPKFMFDDYMKLYANLKFQAK 298          
BLAST of CN181489 vs. ExPASy Swiss-Prot
Match: ACCO_PERAE (1-aminocyclopropane-1-carboxylate oxidase OS=Persea americana GN=ACO PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.860e-20
Identity = 52/130 (40.00%), Postives = 83/130 (63.85%), Query Frame = -3
Query:  120 YPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELI---SPEKPARFRQFTHTDYITRF 497
            YP CP+P+L  G+ +HTD G L +L QDD+  GLQ+    EWVDV P+  ++VIN+GD +++++N +Y SV HRV+A +    R+S+A F++P   D++  P P L+   + EK   + +F   DY+  +
Sbjct:  163 YPPCPRPELFKGLRAHTDAGGLILLFQDDRVAGLQLLKDGEWVDVPPMNHSIVINLGDQVEVITNGKYKSVMHRVVAQTDGN-RMSLASFYNPGS-DAVIFPAPALVEKEAEEKKEVYPKFVFEDYMNLY 290          
BLAST of CN181489 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.860e-20
Identity = 51/128 (39.84%), Postives = 80/128 (62.50%), Query Frame = -3
Query:  129 YPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQ----FTHTDYI 497
            YP CP+PDL  G+ +HTD G + +L QDDK  GLQ+    +W+DV P+  ++V+N+GD L++++N +Y SV HRV+A +    R+S+A F++P   D++  P P L+  E     +Q    F   DY+
Sbjct:  162 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVLHRVIAQTD-GTRMSLASFYNPGS-DAVIYPAPTLVEKEADQECKQVYPKFVFDDYM 287          
BLAST of CN181489 vs. ExPASy Swiss-Prot
Match: FLS_SOLTU (Flavonol synthase/flavanone 3-hydroxylase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.170e-19
Identity = 48/129 (37.21%), Postives = 78/129 (60.47%), Query Frame = -3
Query:  129 MMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFTHTDYI 515
            M+  +YYP CP+PDL +G+ +HTD   +T+L+ ++   +Q+     W DV  +P A++++IGD ++I+SN +Y SV HR   N   + R+S  VF  PS    + GP P LI+   P +F+   + DY+
Sbjct:  217 MLKINYYPPCPRPDLALGVVAHTDMSYITLLVPNE---VQVFKDGHWYDVNYIPNAIIVHIGDQVEILSNGKYKSVYHRTTVNKY-KTRMSWPVFLEPSSEHEV-GPIPNLINEANPPKFKTKKYKDYV 340          
BLAST of CN181489 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.170e-19
Identity = 50/127 (39.37%), Postives = 79/127 (62.20%), Query Frame = -3
Query:  129 YPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPAR---FRQFTHTDYI 497
            YP CP+PDL  G+ +HTD G + +L QDDK  GLQ+    +W+DV P+  ++V+N+GD L++++N +Y SV HRV+A      R+S+A F++P   D++  P P L+  E       + +F   DY+
Sbjct:  162 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKD-GARMSLASFYNPGS-DAVIYPAPALVEKEAEENKQVYPKFVFDDYM 286          
BLAST of CN181489 vs. ExPASy Swiss-Prot
Match: ACCO1_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 1.996e-19
Identity = 50/127 (39.37%), Postives = 81/127 (63.78%), Query Frame = -3
Query:  129 YPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELI---SPEKPARFRQFTHTDYI 497
            YP CP+PDL  G+ +HTD G + +L QDDK  GLQ+   E+W+DV P+  ++V+N+GD L++++N +Y SV HRV+A +    R+S+A F++P   D++  P   L+   + E    + +F   DY+
Sbjct:  162 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDEQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVLHRVIAQTD-GTRMSLASFYNPGS-DAVIYPAKTLVEKEAEESTQVYPKFVFDDYM 286          
BLAST of CN181489 vs. ExPASy Swiss-Prot
Match: IDS2_HORVU (Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=IDS2 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.607e-19
Identity = 53/141 (37.59%), Postives = 82/141 (58.16%), Query Frame = -3
Query:  102 GRMMVG-HYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFTHTDYITRFFTKQLD 521
            GR++V  +YYP  P P  T+G+  H D   +T+LL     GL+I +   W+ V+PVP +LVIN G  L++++N    +VEHR   N + EPR+S+A F  P++ D + GP  E +S + P R+R  T  ++  +     LD
Sbjct:  184 GRVVVDINYYPPSPNPSRTLGLPPHCDRDLMTVLLPGAVPGLEIAYKGGWIKVQPVPNSLVINFGLQLEVVTNGYLKAVEHRAATNFA-EPRLSVASFIVPAD-DCVVGPAEEFVSEDNPPRYRTLTVGEFKRKHNVVNLD 322          
BLAST of CN181489 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.607e-19
Identity = 50/127 (39.37%), Postives = 81/127 (63.78%), Query Frame = -3
Query:  129 YPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELI---SPEKPARFRQFTHTDYI 497
            YP CP+PDL  G+ +HTD G + +L QDDK  GLQ+    +W+DV P+  ++V+N+GD L++++N +Y SV HRV+  +    R+S+A F++P   D++  P P L+   + E  A + +F   DY+
Sbjct:  162 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGQWIDVPPMRLSIVVNLGDQLEVITNGKYKSVMHRVITQTD-GTRMSLASFYNPGS-DAVIFPAPTLVEKEAEESKAIYPKFVFDDYM 286          
BLAST of CN181489 vs. ExPASy Swiss-Prot
Match: GAOX1_ARATH (Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 4.446e-19
Identity = 56/143 (39.16%), Postives = 77/143 (53.85%), Query Frame = -3
Query:  129 KTDRLKEKTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFTHTDYI 557
            K D  +E       +M  +YYP C +PDLT+G   H DP  LTIL QD   GLQ+    +W  ++P P A V+NIGD    +SND Y S  HR + NS  E R S+A F  P ++D +  P  EL+      R+  FT + ++
Sbjct:  212 KRDYFREFFEENDSIMRLNYYPPCIKPDLTLGTGPHCDPTSLTILHQDHVNGLQVFVENQWRSIRPNPKAFVVNIGDTFMALSNDRYKSCLHRAVVNSESE-RKSLAFFLCP-KKDRVVTPPRELLDSITSRRYPDFTWSMFL 352          
BLAST of CN181489 vs. ExPASy Swiss-Prot
Match: ACCO_MUSAC (1-aminocyclopropane-1-carboxylate oxidase OS=Musa acuminata GN=MAO1B PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.446e-19
Identity = 55/139 (39.57%), Postives = 84/139 (60.43%), Query Frame = -3
Query:   96 YYPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSL---YGPFPELISPEKPARFRQFTHTDYITRFFTKQLDGK 500
            +YP CP+ DL  G+ +HTD G + +L QDD+ GGLQ+     W+DV+P+  A+VIN GD ++++SN  Y S  HRVLA S    R SIA F++PS + ++    G   E  +P  PA + +F   DY+  +  ++ + K
Sbjct:  161 HYPPCPRLDLVKGLRAHTDAGGVILLFQDDQVGGLQMLKDGRWIDVQPLADAIVINTGDQIEVLSNGRYKSAWHRVLATSHGNRR-SIASFYNPSLKATIAPAAGAATEEAAP--PALYPKFLFGDYMDVYAKQKYEPK 296          
The following BLAST results are available for this feature:
BLAST of CN181489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
ACCO2_SOLLC5.252e-2038.131-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
ACCO_PERAE6.860e-2040.001-aminocyclopropane-1-carboxylate oxidase OS=Perse... [more]
ACCO3_PETHY6.860e-2039.841-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
FLS_SOLTU1.170e-1937.21Flavonol synthase/flavanone 3-hydroxylase OS=Solan... [more]
ACCO1_PETHY1.170e-1939.371-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
ACCO1_SOLLC1.996e-1939.371-aminocyclopropane-1-carboxylate oxidase 1 OS=Sol... [more]
IDS2_HORVU2.607e-1937.59Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=... [more]
ACCO_TOBAC2.607e-1939.371-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]
GAOX1_ARATH4.446e-1939.16Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana G... [more]
ACCO_MUSAC4.446e-1939.571-aminocyclopropane-1-carboxylate oxidase OS=Musa ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001A10_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181489 ID=CN181489; Name=CN181489; organism=Citrus sinensis; type=EST; length=667bp
GAATTGTTATTCTTACGTAAGAATAGTTTATACAGGCACAAACAACCAGA
TTTACCAAGTTTTGTTTCTTACAGCCTATAGTAATTCACCAATGTTTTTC
CATCTAACTGTTTTGTGAAGAACCTTGTTATATAGTCCGTGTGTGTGAAC
TGCCGAAAACGAGCTGGCTTCTCTGGGGATATCAGCTCCGGGAATGGTCC
ATAAAGGCTGTCCCTCTCGCTTGGACTGAAGAAAACAGCAATTGAGATTC
GTGGTTCCGGGGACGAATTAGCCAATACTCTATGCTCTACACTTATGTAT
TCATCATTGGACATAATCTGAAGTATATCCCCAATGTTAATAACCAGAGC
TCCTGGAACTGGTTTAACATCCACCCATTCCTCACCATGCTTAATTTGCA
GCCCACCTTTATCATCTTGCAACAAGATTGTCAATGGCCCTGGATCAGTA
TGAGATGTGATCCCCACTGTCAGATCAGGCTGCGGACAGTAGGGATAATA
ATGGCCCACCATCATCCTCCCTTCCAGGAAGGTCTTTTCCTTCAACCTAT
CGGTTTTCAACCCCAAACCTTCACACAGCAGCCCAAACAAAAGCTCTCCG
AGCTGTTTTACATGGTGGTTCCACTCGACTGCCTCTTTCCTACATATTTC
AGGAACTTCTTCAAGCT
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