CN181478

Overview
NameCN181478
Unique NameCN181478
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length705
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2266 contig Csv1_Contig2266:1..705. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181478 vs. ExPASy Swiss-Prot
Match: PDIA4_CAEEL (Probable protein disulfide-isomerase A4 OS=Caenorhabditis elegans GN=C14B9.2 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 5.143e-24
Identity = 74/211 (35.07%), Postives = 111/211 (52.61%), Query Frame = 2
Query:    2 RISFLLGDLEASQGAFQYFGLQESQVPL-IVIQTNDGQKY-LKPN-----LDADQIAPWVKEYKEGKVPPFRKSEPIPEENNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSY-QNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVP--YEGDRTKEDIVDFIENNRDKAAPKETVKEESGKDEL 604
            +  F + D E      +  GL +S +   +V+   DG+KY + P+     LD + +  ++K+   GK     KS P P+++  PVK +V  +   +V +  K+VL+EFYAPWCGHCK       E+A +  +   +VV+AK DAT ND P   F V+G+PT++F  A  K+ P  Y G+R  ED+  F+         K  VK    KDEL
Sbjct:  418 KYKFAVADEEEFAKELEELGLGDSGLEHNVVVFGYDGKKYPMNPDEFDGELD-ENLEAFMKQISSGKAKAHVKSAPAPKDDKGPVKTVVGSNFDKIVNDESKDVLIEFYAPWCGHCKSFESKYVELAQALKKTQPNVVLAKMDATINDAPSQ-FAVEGFPTIYFAPAGKKSEPIKYSGNRDLEDLKKFM--------TKHGVKSFQKKDEL 618          

HSP 2 Score: 79.337 bits (194), Expect = 2.166e-14
Identity = 43/116 (37.07%), Postives = 63/116 (54.31%), Query Frame = 2
Query:  239 VLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNRD---KAAPKETV 577
            V++ D   D       +VL++FYAPWCGHCK LAP  ++ +    +   + +AK DAT     G  FE+QGYPT+ F         Y+G R +  IV+++E+  D   K  P+E V
Sbjct:   39 VVLTDKNFDAFLKKNPSVLVKFYAPWCGHCKHLAPEYEKAS----SKVSIPLAKVDATVETELGKRFEIQGYPTLKFWKDGKGPNDYDGGRDEAGIVEWVESRVDPNYKPPPEEVV 150          

HSP 3 Score: 77.411 bits (189), Expect = 8.230e-14
Identity = 50/138 (36.23%), Postives = 72/138 (52.17%), Query Frame = 2
Query:  158 VKEYKEGKVPPFRKSEPIPEENNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQ-NDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNRDKAAPK 568
            + E+ E +V P  K  P PEE    V  L  ++  D + N+ + VL+EFYAPWCGHCKKLAP  ++ A   +   + V + K DAT     G  + V GYPT+     +G+   Y G R    I+ ++ +    AA K
Sbjct:  130 IVEWVESRVDPNYK--PPPEE----VVTLTTENFDDFISNN-ELVLVEFYAPWCGHCKKLAPEYEKAAQKLKAQGSKVKLGKVDATIEKDLGTKYGVSGYPTMKI-IRNGRRFDYNGPREAAGIIKYMTDQSKPAAKK 259          
BLAST of CN181478 vs. ExPASy Swiss-Prot
Match: PDIA2_PONAB (Protein disulfide-isomerase A2 OS=Pongo abelii GN=PDIA2 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.552e-23
Identity = 62/189 (32.80%), Postives = 104/189 (55.03%), Query Frame = 2
Query:    2 RISFLLGDLEA-SQGAFQYFGLQESQVPLIVIQTNDGQKYLKP----NLDADQIAPWVKEYKEGKVPPFRKSEPIPEE-NNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASG-KTVPYEGDRTKEDIVDFIEN 544
            ++ F++ D+ A ++   QYFGL+    P + +   +  K   P     +    I  +      G+V P+  S+ +P + +  PVK LV  + + + F+  KNV ++FYAPWC HCK++AP  + +A  YQ+  DV+IA+ DATAN++  D F V G+PT+ +F +  G K + Y+  R       F++N
Sbjct:  307 QVLFVVVDVAADNEHVLQYFGLKAEAAPTLRLVNLETTKKYAPVDGGPVTTASITAFCHAVLNGQVKPYLLSQEVPPDWDQRPVKTLVGKNFEQVAFDETKNVFVKFYAPWCTHCKEMAPAWEALAEKYQDHEDVIIAELDATANEL--DAFAVHGFPTLKYFPAGPGRKVIEYKSTRDLGTFSKFLDN 493          
BLAST of CN181478 vs. ExPASy Swiss-Prot
Match: PDI_ALTAL (Protein disulfide-isomerase (Fragment) OS=Alternaria alternata PE=1 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 7.427e-23
Identity = 58/132 (43.94%), Postives = 81/132 (61.36%), Query Frame = 2
Query:   80 PLIVIQTNDGQKYLKPNLDAD----QIAPWVKEYKEGKVPPFRKSEPIPEENNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQND---ADVVIAKFDATANDIPGDTFEVQGY 454
            P   IQ  +  +    N +A     +I  +V ++  GK+ P  KSEPIPE N+ PV V+VA + +D+V ++ K+VL+EFYAPWCGHCK LAP  +E+   Y +D     V IAK DAT ND+P    E+QG+
Sbjct:  183 PAFAIQRTEKNEKFPTNQEAKITEKEIGKFVDDFLAGKIDPSIKSEPIPESNDGPVTVVVAHNYKDVVIDNDKDVLVEFYAPWCGHCKALAPKYEELGQLYASDELSKLVTIAKVDATLNDVPD---EIQGF 311          
BLAST of CN181478 vs. ExPASy Swiss-Prot
Match: PDI_YEAST (Protein disulfide-isomerase OS=Saccharomyces cerevisiae GN=PDI1 PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.120e-21
Identity = 56/142 (39.44%), Postives = 85/142 (59.86%), Query Frame = 2
Query:  131 LDADQIAPWVKEYKEGKVPPFRKSEPIPEENNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQN-DADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGK--TVPYEGDRTKEDIVDFIENN 547
            L++  I   VK++ +G   P  KS+ I E  +  V  LV  +  ++V +  K+VL+ +YAPWCGHCK+LAP   E+A +Y N  +DV+IAK D T ND+ G    ++GYPT+       K  +V Y+G R+ + + DFI+ N
Sbjct:  344 LESKAIESLVKDFLKGDASPIVKSQEIFENQDSSVFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDVRG--VVIEGYPTIVLYPGGKKSESVVYQGSRSLDSLFDFIKEN 483          

HSP 2 Score: 67.781 bits (164), Expect = 6.521e-11
Identity = 41/118 (34.75%), Postives = 63/118 (53.39%), Query Frame = 2
Query:  191 FRKSEPIPEENNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPT--VFFRSASGKTVPYEGDRTKEDIVDFI 538
            F + E +  E++  VK L  DS  + +  S   VL EF+APWCGHCK +AP   + A +   + ++ +A+ D T N        + G+P+  +F  S    ++ YEG RT E IV F+
Sbjct:   21 FAQQEAVAPEDSAVVK-LATDSFNEYI-QSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLV-EKNITLAQIDCTENQDLCMEHNIPGFPSLKIFKNSDVNNSIDYEGPRTAEAIVQFM 135          
BLAST of CN181478 vs. ExPASy Swiss-Prot
Match: PDILT_RAT (Protein disulfide-isomerase-like protein of the testis OS=Rattus norvegicus GN=Pdilt PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.884e-20
Identity = 62/191 (32.46%), Postives = 102/191 (53.40%), Query Frame = 2
Query:    2 RISFLL--GDLEASQGAFQYFGLQESQVPLI-VIQTNDGQKYLKP--NLDADQIAPWVKEYKEGKVPPFRKSEPIPEE-NNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFR---SASGKTVPYEGDRTKEDIVDFIENN 547
            +I F+L   D   ++  F+YF +    VP + ++  +   +Y  P  N+  + +  +   +        + SE IP+  + EPVK LV  +   +VF+  K+V + FYAPW   C+ L P+L+E+ + YQN + V+IAK D TANDI       + YP  FFR   + S + V Y+G+ T +   DF+E++
Sbjct:  303 KILFVLVNSDEPKNKRIFEYFQISRVNVPSVQILNLSSDARYKMPTDNITFESLKKFCNSFLSRTAKKHKSSEEIPKYWDQEPVKKLVGKNFNVVVFDKEKDVFVMFYAPWSEKCRVLLPLLEELGIKYQNHSTVIIAKIDITANDI--QLANPEQYP--FFRLFPTDSQEAVMYKGEHTMKGFCDFLESH 489          
BLAST of CN181478 vs. ExPASy Swiss-Prot
Match: EUG1_YEAST (Protein disulfide-isomerase EUG1 OS=Saccharomyces cerevisiae GN=EUG1 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.685e-20
Identity = 59/152 (38.82%), Postives = 85/152 (55.92%), Query Frame = 2
Query:  113 KYLKPN-LDADQIAPWVKEYKEGKVPPFRKSEPIPEENNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADV----VIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVP--YEGDRTKEDIVDFIENN 547
            K  KP  LD D I   VK+Y+EG   P  KSE IP+E    V  +V  +  D+V +  K+VL+++YA WC H K+ API +E+A    +D  V    +IA+ D+ ANDI   +F V GYPT+    A   + P  +   R  ED+ +FI+ +
Sbjct:  336 KLEKPQPLDRDMIVQLVKDYREGTAKPIVKSEEIPKEQKSNVYKIVGKTHDDIVHDDDKDVLVKYYATWCIHSKRFAPIYEEIANVLASDESVRDKILIAEVDSGANDIL--SFPVTGYPTIALYPAGNNSKPIIFNKIRNLEDVFEFIKES 485          
BLAST of CN181478 vs. ExPASy Swiss-Prot
Match: PDIA6_ARATH (Probable protein disulfide-isomerase A6 OS=Arabidopsis thaliana GN=At2g47470 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.236e-19
Identity = 64/181 (35.36%), Postives = 97/181 (53.59%), Query Frame = 2
Query:  110 QKYLKPNLDADQIAPWVKEYKEGKVPPFRKSEPIPEENNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTVPYEGDRTKEDIVDFIENNRDKAAPKETVKEESGKDEL*EGMGASLLESRAHS 649
            QKY  P  +A+ +A +V   KEG      K   +P+     V VL  D+  ++V +  K+VL+EFYAPWCGHCK LAP  ++VA  ++ +  VVIA  DA A+   G+ + V G+PT+ FF   +     Y+G R  +D V FI  N      +++  + + K  + E + A + E  A S
Sbjct:  111 QKYEGPR-NAEALAEYVN--KEGGTNV--KLAAVPQN----VVVLTPDNFDEIVLDQNKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIANLDADAHKALGEKYGVSGFPTLKFFPKDNKAGHDYDGGRDLDDFVSFI--NEKSGTSRDSKGQLTSKAGIVESLDALVKELVAAS 280          

HSP 2 Score: 77.411 bits (189), Expect = 8.230e-14
Identity = 41/105 (39.05%), Postives = 58/105 (55.24%), Query Frame = 2
Query:  227 EPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTVPYEGDRTKEDIVDFI 538
            + V VL  DS +  V    K  L+EFYAPWCGHCKKLAP  +++  S++    V+IAK D          + V GYPT+ +F   S +   YEG R  E + +++
Sbjct:   23 DDVVVLTDDSFEKEV-GKDKGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIAKVDCDEQKSVCTKYGVSGYPTIQWFPKGSLEPQKYEGPRNAEALAEYV 126          
BLAST of CN181478 vs. ExPASy Swiss-Prot
Match: PDILT_HUMAN (Protein disulfide-isomerase-like protein of the testis OS=Homo sapiens GN=PDILT PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.472e-18
Identity = 61/191 (31.94%), Postives = 102/191 (53.40%), Query Frame = 2
Query:    2 RISFLLGDLEASQGA--FQYFGLQESQVPLI-VIQTNDGQKYLKPNLDA--DQIAPWVKEYKEGKVPPFRKSEPIPEENNEP-VKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFR---SASGKTVPYEGDRTKEDIVDFIENN 547
            +I F+L D +  +    F+YF + E  +P + ++  +   +Y  P+ D   + +  + + +        + SE IP+  ++  VK LV  +   +VF+  K+V + FYAPW   CK L P+L+E+   YQN + ++IAK D TANDI      +  YP  FFR   S S + V Y+G+ T +   DF+E++
Sbjct:  306 KILFILVDADEPRNGRVFKYFRVTEVDIPSVQILNLSSDARYKMPSDDITYESLKKFGRSFLSKNATKHQSSEEIPKYWDQGLVKQLVGKNFNVVVFDKEKDVFVMFYAPWSKKCKMLFPLLEELGRKYQNHSTIIIAKIDVTANDI--QLMYLDRYP--FFRLFPSGSQQAVLYKGEHTLKGFSDFLESH 492          
BLAST of CN181478 vs. ExPASy Swiss-Prot
Match: PDILT_MOUSE (Protein disulfide-isomerase-like protein of the testis OS=Mus musculus GN=Pdilt PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 7.193e-18
Identity = 59/191 (30.89%), Postives = 102/191 (53.40%), Query Frame = 2
Query:    2 RISFLL--GDLEASQGAFQYFGLQESQVPLI-VIQTNDGQKYLKP--NLDADQIAPWVKEYKEGKVPPFRKSEPIPEENNE-PVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFR---SASGKTVPYEGDRTKEDIVDFIENN 547
            +I F+L   D   ++  F+YF +    VP + ++  +   +Y  P  +++ + +  +   +        + SE IP+  ++ PVK LV  +   +V +  K+V + FYAPW   C+ L P+L+E+ + YQN + V+IAK D TANDI       + YP  FFR   + S + V Y+G+ T +   DF+E++
Sbjct:  303 KILFVLVNADEPKNKRIFEYFQISRVNVPSVQILNLSSDGRYKMPTDDINFESLKKFCNSFLSKTAKKHKASEEIPKYWDQGPVKKLVGKNFNVVVLDKEKDVFVMFYAPWSEKCRVLLPLLEELGIKYQNHSTVIIAKIDITANDI--QLANPEQYP--FFRLFPTDSQEAVMYKGEHTMKGFCDFLESH 489          
BLAST of CN181478 vs. ExPASy Swiss-Prot
Match: ERP38_NEUCR (Protein disulfide-isomerase erp38 OS=Neurospora crassa GN=erp38 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.602e-17
Identity = 48/112 (42.86%), Postives = 66/112 (58.93%), Query Frame = 2
Query:  242 LVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDAD-VVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTVPYEGDRTKEDIVDFIENNRDKAAPKE 571
            L+  +  D+V  SGK  L+EF+APWCGHCK LAP+ +E+A + +   D V IAK DA A    G  F VQG+PT+ FF   S + V Y+G R  + + +FI       A K+
Sbjct:   25 LIPSNFDDVVLKSGKPTLVEFFAPWCGHCKNLAPVYEELATALEYAKDKVQIAKVDADAERALGKRFGVQGFPTLKFFDGKSEQPVDYKGGRDLDSLSNFIAEKTGVKARKK 136          

HSP 2 Score: 75.0998 bits (183), Expect = 4.085e-13
Identity = 52/175 (29.71%), Postives = 81/175 (46.29%), Query Frame = 2
Query:   23 DLEASQGAFQYFGLQESQVPLIVIQTNDGQKYLKPNLDADQIAPWVKEYKEGKVPPFRKSEPIPEENNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATA--NDIPGDTFEVQGYPTV-FFRSASGKTVPYEGDRTKEDIVDFI 538
            D +A +   + FG+Q           ++     K   D D ++ ++ E    K    RK    P   N     ++ D+         KNVL+ F APWCGHCK LAP  +++A ++ +D ++ IAK DA A         + V G+PT+ FF   S     Y G R++ D+V F+
Sbjct:   80 DADAERALGKRFGVQGFPTLKFFDGKSEQPVDYKGGRDLDSLSNFIAEKTGVKA---RKKGSAPSLVN-----ILNDATIKGAIGGDKNVLVAFTAPWCGHCKNLAPTWEKLAATFASDPEITIAKVDADAPTGKKSAAEYGVSGFPTIKFFPKGSTTPEDYNGGRSEADLVKFL 246          
The following BLAST results are available for this feature:
BLAST of CN181478 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
PDIA4_CAEEL5.143e-2435.07Probable protein disulfide-isomerase A4 OS=Caenorh... [more]
PDIA2_PONAB2.552e-2332.80Protein disulfide-isomerase A2 OS=Pongo abelii GN=... [more]
PDI_ALTAL7.427e-2343.94Protein disulfide-isomerase (Fragment) OS=Alternar... [more]
PDI_YEAST3.120e-2139.44Protein disulfide-isomerase OS=Saccharomyces cerev... [more]
PDILT_RAT5.884e-2032.46Protein disulfide-isomerase-like protein of the te... [more]
EUG1_YEAST7.685e-2038.82Protein disulfide-isomerase EUG1 OS=Saccharomyces ... [more]
PDIA6_ARATH2.236e-1935.36Probable protein disulfide-isomerase A6 OS=Arabido... [more]
PDILT_HUMAN2.472e-1831.94Protein disulfide-isomerase-like protein of the te... [more]
PDILT_MOUSE7.193e-1830.89Protein disulfide-isomerase-like protein of the te... [more]
ERP38_NEUCR1.602e-1742.86Protein disulfide-isomerase erp38 OS=Neurospora cr... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001A04_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181478 ID=CN181478; Name=CN181478; organism=Citrus sinensis; type=EST; length=705bp
GAGGATTAGTTTTCTTTTGGGAGACCTTGAGGCTAGTCAAGGTGCCTTCC
AGTACTTTGGGCTACAAGAGAGCCAAGTACCTCTCATCGTCATTCAGACT
AATGATGGGCAGAAGTATTTGAAGCCGAACTTGGATGCCGATCAGATTGC
ACCTTGGGTGAAGGAATACAAGGAAGGCAAGGTTCCCCCATTCAGAAAGT
CTGAGCCTATCCCTGAAGAGAACAACGAGCCTGTGAAAGTGCTTGTTGCT
GACAGCCTTCAGGACATGGTTTTCAACTCTGGAAAAAATGTTTTGCTCGA
GTTTTACGCTCCTTGGTGTGGACACTGCAAAAAGTTGGCTCCAATCTTGG
ATGAAGTTGCTGTCTCATATCAAAACGATGCTGATGTTGTTATTGCAAAA
TTTGATGCAACCGCAAATGATATTCCTGGTGACACTTTTGAAGTCCAAGG
TTACCCAACCGTGTTCTTCCGATCTGCTAGTGGAAAGACAGTGCCCTATG
AGGGGGATAGGACCAAAGAAGATATTGTTGACTTCATTGAAAATAACAGG
GACAAAGCTGCCCCCAAGGAAACTGTAAAAGAGGAATCTGGAAAAGATGA
GCTCTAAGAAGGAATGGGTGCGAGTTTATTAGAGAGCCGTGCACATAGTC
GGTTGGCGCGTGTTTGGCGGATGTTATACCAAAACTATCAGTGTCGACAA
AACAA
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