CN181477

Overview
NameCN181477
Unique NameCN181477
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length633
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3890 contig Csv1_Contig3890:239..871. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181477 vs. ExPASy Swiss-Prot
Match: PDIA4_CAEEL (Probable protein disulfide-isomerase A4 OS=Caenorhabditis elegans GN=C14B9.2 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.033e-14
Identity = 47/108 (43.52%), Postives = 61/108 (56.48%), Query Frame = -3
Query:  317 VLLEFYAPWCGHCKKLAPILDEVAVSY-QNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVP--YEGDRTKEDIVDFIENNRDKAAPKETVKEESGKDEL 631
            VL+EFYAPWCGHCK       E+A +  +   +VV+AK DAT ND P   F V+G+PT++F  A  K+ P  Y G+R  ED+  F+         K  VK    KDEL
Sbjct:  520 VLIEFYAPWCGHCKSFESKYVELAQALKKTQPNVVLAKMDATINDAPSQ-FAVEGFPTIYFAPAGKKSEPIKYSGNRDLEDLKKFM--------TKHGVKSFQKKDEL 618          

HSP 2 Score: 75.485 bits (184), Expect = 2.544e-13
Identity = 40/99 (40.40%), Postives = 57/99 (57.58%), Query Frame = -3
Query:  344 VLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNRD---KAAPKETV 631
            VL++FYAPWCGHCK LAP  ++ +    +   + +AK DAT     G  FE+QGYPT+ F         Y+G R +  IV+++E+  D   K  P+E V
Sbjct:   56 VLVKFYAPWCGHCKHLAPEYEKAS----SKVSIPLAKVDATVETELGKRFEIQGYPTLKFWKDGKGPNDYDGGRDEAGIVEWVESRVDPNYKPPPEEVV 150          

HSP 3 Score: 67.781 bits (164), Expect = 5.304e-11
Identity = 37/94 (39.36%), Postives = 51/94 (54.26%), Query Frame = -3
Query:  353 VLLEFYAPWCGHCKKLAPILDEVAVSYQ-NDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNRDKAAPK 631
            VL+EFYAPWCGHCKKLAP  ++ A   +   + V + K DAT     G  + V GYPT+     +G+   Y G R    I+ ++ +    AA K
Sbjct:  167 VLVEFYAPWCGHCKKLAPEYEKAAQKLKAQGSKVKLGKVDATIEKDLGTKYGVSGYPTMKI-IRNGRRFDYNGPREAAGIIKYMTDQSKPAAKK 259          
BLAST of CN181477 vs. ExPASy Swiss-Prot
Match: ERP60_SCHMA (Probable protein disulfide-isomerase ER-60 OS=Schistosoma mansoni PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.349e-14
Identity = 36/85 (42.35%), Postives = 56/85 (65.88%), Query Frame = -3
Query:  383 VLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVP--YEGDRTKEDIVDFI 631
            V++ F+A WCGHCK L P  +E A   +N+ ++V+A  DATAND+P   ++V+G+PT++F     K+ P  YEG R   DI+ ++
Sbjct:  379 VMVVFHAGWCGHCKNLMPKYEEAASKVKNEPNLVLAAMDATANDVP-SPYQVRGFPTIYFVPKGKKSSPVSYEGGRDTNDIIKYL 462          
BLAST of CN181477 vs. ExPASy Swiss-Prot
Match: PDIA6_MEDSA (Probable protein disulfide-isomerase A6 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.761e-14
Identity = 43/103 (41.75%), Postives = 60/103 (58.25%), Query Frame = -3
Query:  329 VLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTVPYEGDRTKEDIVDFI-ENNRDKAAPKETVKEESG 631
            VL+EFYAPWCGHCK LAPI ++VA  ++++ DVVIA  DA       + ++V G+PT+ FF   +     Y G R  +D V FI E +      K  +  E+G
Sbjct:  168 VLVEFYAPWCGHCKSLAPIYEKVAAVFKSEDDVVIANLDADKYRDLAEKYDVSGFPTLKFFPKGNKAGEDYGGGRDLDDFVAFINEKSGTSRDAKGQLTSEAG 270          

HSP 2 Score: 73.559 bits (179), Expect = 9.665e-13
Identity = 35/83 (42.17%), Postives = 51/83 (61.45%), Query Frame = -3
Query:  383 LLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTVPYEGDRTKEDIVDFI 628
            L+EFYAPWCGHCKKLAP  +++  S++    V+IAK D   +      + V GYPT+ +F   S +   +EG RT E + +F+
Sbjct:   50 LVEFYAPWCGHCKKLAPEYEKLPNSFKKAKSVLIAKVDCDEHKSVCSKYGVSGYPTIQWFPKGSLEPKKFEGPRTAESLAEFV 132          
BLAST of CN181477 vs. ExPASy Swiss-Prot
Match: PDIA2_HUMAN (Protein disulfide-isomerase A2 OS=Homo sapiens GN=PDIA2 PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.301e-14
Identity = 41/101 (40.59%), Postives = 61/101 (60.40%), Query Frame = -3
Query:  335 VLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASG-KTVPYEGDRTKEDIVDFIENNRDKAAPKETVKEE 631
            V ++FYAPWC HCK++AP  + +A  YQ+  D++IA+ DATAN++  D F V G+PT+ +F +  G K + Y+  R  E    F++N      P E   EE
Sbjct:  409 VFVKFYAPWCTHCKEMAPAWEALAEKYQDHEDIIIAELDATANEL--DAFAVHGFPTLKYFPAGPGRKVIEYKSTRDLETFSKFLDNG--GVLPTEEPPEE 505          
BLAST of CN181477 vs. ExPASy Swiss-Prot
Match: ERP38_NEUCR (Protein disulfide-isomerase erp38 OS=Neurospora crassa GN=erp38 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 5.125e-14
Identity = 42/95 (44.21%), Postives = 57/95 (60.00%), Query Frame = -3
Query:  350 LLEFYAPWCGHCKKLAPILDEVAVSYQNDAD-VVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTVPYEGDRTKEDIVDFIENNRDKAAPKE 628
            L+EF+APWCGHCK LAP+ +E+A + +   D V IAK DA A    G  F VQG+PT+ FF   S + V Y+G R  + + +FI       A K+
Sbjct:   42 LVEFFAPWCGHCKNLAPVYEELATALEYAKDKVQIAKVDADAERALGKRFGVQGFPTLKFFDGKSEQPVDYKGGRDLDSLSNFIAEKTGVKARKK 136          

HSP 2 Score: 70.0922 bits (170), Expect = 1.069e-11
Identity = 35/86 (40.70%), Postives = 51/86 (59.30%), Query Frame = -3
Query:  383 VLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATA--NDIPGDTFEVQGYPTV-FFRSASGKTVPYEGDRTKEDIVDFI 631
            VL+ F APWCGHCK LAP  +++A ++ +D ++ IAK DA A         + V G+PT+ FF   S     Y G R++ D+V F+
Sbjct:  161 VLVAFTAPWCGHCKNLAPTWEKLAATFASDPEITIAKVDADAPTGKKSAAEYGVSGFPTIKFFPKGSTTPEDYNGGRSEADLVKFL 246          
BLAST of CN181477 vs. ExPASy Swiss-Prot
Match: TIGA_ASPNG (Protein disulfide-isomerase tigA OS=Aspergillus niger GN=tigA PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.742e-14
Identity = 40/86 (46.51%), Postives = 55/86 (63.95%), Query Frame = -3
Query:  383 VLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFE--VQGYPTV-FFRSASGKTVPYEGDRTKEDIVDFI 631
            VL+ F APWCGHCK LAP  + +A  +  + +VVIAK DA A +      E  V GYPT+ FF   S ++VPYEG R+++  +DF+
Sbjct:  160 VLVAFTAPWCGHCKNLAPTWEALANDFVLEPNVVIAKVDADAENGKATAREQGVSGYPTIKFFPKGSTESVPYEGARSEQAFIDFL 245          

HSP 2 Score: 71.633 bits (174), Expect = 3.673e-12
Identity = 39/101 (38.61%), Postives = 59/101 (58.42%), Query Frame = -3
Query:  332 LLEFYAPWCGHCKKLAPILDEVAVSYQNDAD-VVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTVPYEGDRTKEDIVDFIENNRDKAAPKETVKEES 628
            L+EF+APWCGHCK LAP+ +E+  ++ + +D V + K DA  +   G  F VQG+PT+ +F   S +   Y+G R  E +  FI + +    P+   KE S
Sbjct:   41 LVEFFAPWCGHCKNLAPVYEELGQAFAHASDKVTVGKVDADEHRDLGRKFGVQGFPTLKWFDGKSDEPEDYKGGRDLESLSSFI-SEKTGVKPRGPKKEPS 140          
BLAST of CN181477 vs. ExPASy Swiss-Prot
Match: PDIA2_PONAB (Protein disulfide-isomerase A2 OS=Pongo abelii GN=PDIA2 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.491e-13
Identity = 37/87 (42.53%), Postives = 56/87 (64.37%), Query Frame = -3
Query:  377 VLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASG-KTVPYEGDRTKEDIVDFIEN 631
            V ++FYAPWC HCK++AP  + +A  YQ+  DV+IA+ DATAN++  D F V G+PT+ +F +  G K + Y+  R       F++N
Sbjct:  409 VFVKFYAPWCTHCKEMAPAWEALAEKYQDHEDVIIAELDATANEL--DAFAVHGFPTLKYFPAGPGRKVIEYKSTRDLGTFSKFLDN 493          
BLAST of CN181477 vs. ExPASy Swiss-Prot
Match: TMX3_XENLA (Protein disulfide-isomerase TMX3 OS=Xenopus laevis GN=tmx3 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.262e-12
Identity = 36/83 (43.37%), Postives = 50/83 (60.24%), Query Frame = -3
Query:  386 LLEFYAPWCGHCKKLAPILDEVAVSYQNDADVV-IAKFDATANDIPGDTFEVQGYPTVFFRSASG-KTVPYEGDRTKEDIVDF 628
            L++FYAPWCGHCKKL P+ +EV +  +     + + K DAT        F V+G+PT+  ++  G     Y G RTKEDIV+F
Sbjct:   45 LVDFYAPWCGHCKKLEPVWNEVGIEIRTSGSPIRVGKIDATVYSSIASEFGVRGFPTI--KALKGDMAYNYRGPRTKEDIVEF 125          
BLAST of CN181477 vs. ExPASy Swiss-Prot
Match: TMX3_MOUSE (Protein disulfide-isomerase TMX3 OS=Mus musculus GN=Tmx3 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.262e-12
Identity = 36/82 (43.90%), Postives = 50/82 (60.98%), Query Frame = -3
Query:  386 LLEFYAPWCGHCKKLAPILDEVAVSYQN-DADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDF 628
            L++FYAPWCGHCKKL PI +EV +  ++  + V + K DAT+       F V+GYPT+           Y G RTK+DI++F
Sbjct:   48 LVDFYAPWCGHCKKLEPIWNEVGLEMKSIGSPVKVGKMDATSYSSIASEFGVRGYPTIKLLKGD-LAYNYRGPRTKDDIIEF 128          
BLAST of CN181477 vs. ExPASy Swiss-Prot
Match: TMX3_HUMAN (Protein disulfide-isomerase TMX3 OS=Homo sapiens GN=TMX3 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.262e-12
Identity = 36/82 (43.90%), Postives = 50/82 (60.98%), Query Frame = -3
Query:  386 LLEFYAPWCGHCKKLAPILDEVAVSYQN-DADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDF 628
            L++FYAPWCGHCKKL PI +EV +  ++  + V + K DAT+       F V+GYPT+           Y G RTK+DI++F
Sbjct:   45 LVDFYAPWCGHCKKLEPIWNEVGLEMKSIGSPVKVGKMDATSYSSIASEFGVRGYPTIKLLKGD-LAYNYRGPRTKDDIIEF 125          
The following BLAST results are available for this feature:
BLAST of CN181477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
PDIA4_CAEEL1.033e-1443.52Probable protein disulfide-isomerase A4 OS=Caenorh... [more]
ERP60_SCHMA1.349e-1442.35Probable protein disulfide-isomerase ER-60 OS=Schi... [more]
PDIA6_MEDSA1.761e-1441.75Probable protein disulfide-isomerase A6 OS=Medicag... [more]
PDIA2_HUMAN2.301e-1440.59Protein disulfide-isomerase A2 OS=Homo sapiens GN=... [more]
ERP38_NEUCR5.125e-1444.21Protein disulfide-isomerase erp38 OS=Neurospora cr... [more]
TIGA_ASPNG8.742e-1446.51Protein disulfide-isomerase tigA OS=Aspergillus ni... [more]
PDIA2_PONAB1.491e-1342.53Protein disulfide-isomerase A2 OS=Pongo abelii GN=... [more]
TMX3_XENLA1.262e-1243.37Protein disulfide-isomerase TMX3 OS=Xenopus laevis... [more]
TMX3_MOUSE1.262e-1243.90Protein disulfide-isomerase TMX3 OS=Mus musculus G... [more]
TMX3_HUMAN1.262e-1243.90Protein disulfide-isomerase TMX3 OS=Homo sapiens G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001A04_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181477 ID=CN181477; Name=CN181477; organism=Citrus sinensis; type=EST; length=633bp
TATCCATTTCGGATTTAACACGCAGTAAGTTACTCCTAGGCGCCGAAAAT
ACTAAAATATCACAACTATGCGAATACCAAAAAGTACTGCAGCTACAAAT
GCCGAAAATGCCTCCCCATTTTATTCACGGGAACAGAACAGATCTGTAAA
GGGAAATGGCCTAAGAAAAAGCTATAAGGGGGGATATAGGACAAGGGGGA
GGAGAACATCAGGCATTGTTTTGTCGACACTGATAGTTTTGGTATAACAT
CCGCCAAACACGCGCCAACCGACTATGTGCACGGCTCTCTAATAAACTCG
CACCCATTCCTTCTTAGAGCTCATCTTTTCCAGATTCCTCTTTTACAGTT
TCCTTGGGGGCAGCTTTGTCCCTGTTATTTTCAATGAAGTCAACAATATC
TTCTTTGGTCCTATCCCCCTCATAGGGCACTGTCTTTCCACTAGCAGATC
GGAAGAACACGGTTGGGTAACCTTGGACTTCAAAAGTGTCACCAGGAATA
TCATTTGCGGTTGCATCAAATTTTGCAATAACAACATCAGCATCGTTTTG
ATATGAGACAGCAACTTCATCCAAGATTGGAGCCAACTTTTTGCAGTGTC
CACACCAAGGAGCGTAAAACTCGAGCAAAACAT
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