CN181474
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: DHH1_PHANO (ATP-dependent RNA helicase DHH1 OS=Phaeosphaeria nodorum GN=DHH1 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.317e-17 Identity = 47/109 (43.12%), Postives = 65/109 (59.63%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIK 591 F DF +K EL+ I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++ P + AL+L TRELA Q + +L I V V GG +K Sbjct: 51 FEDFFIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERVNPKISKTQALILVPTRELALQTSQVCKTLGKHL-GINVMVSTGGTGLK 158
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: DHH1_DEBHA (ATP-dependent RNA helicase DHH1 OS=Debaryomyces hansenii GN=DHH1 PE=3 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.317e-17 Identity = 51/120 (42.50%), Postives = 70/120 (58.33%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 624 F DF LK ELL I ++GFE PS VQ E IP A+ G D++ +AK+G GKTA FV+ LQQ P ++ AL+L TRELA Q +L ++ V GG +++ D+L+ P Sbjct: 32 FEDFPLKRELLMGIFEAGFEKPSPVQEESIPMALAGRDILARAKNGTGKTASFVIPCLQQARPKVNKIQALILVPTRELALQTSQVVRTLGKHL-GLQCMVTTGGTSLR--DDILRLNDP 148
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: RH12_ORYSJ (DEAD-box ATP-dependent RNA helicase 12 OS=Oryza sativa subsp. japonica GN=Os10g0503700 PE=2 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 2.933e-17 Identity = 45/109 (41.28%), Postives = 65/109 (59.63%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIK 591 F D+ LK ELL I + GFE PS +Q E IP A+ G D++ +AK+G GKTA F + L++ +P + ++L TRELA Q + YL +I+V V GG ++K Sbjct: 149 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDPEKNAIQVVILVPTRELALQTSQVCKELGKYL-NIQVMVSTGGTSLK 256
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: DBP9_MAGGR (ATP-dependent RNA helicase DBP9 OS=Magnaporthe grisea GN=DBP9 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.003e-17 Identity = 51/133 (38.35%), Postives = 75/133 (56.39%), Query Frame = 1 Query: 256 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQ------QTEPNPGQVTALVLCHTRELAYQICHEFERFSTY-LPDIKVAVFYGGVNIKIHKDLLKNECPPIV 633 SS F D L P LL+A+ F+ P+ VQ + IP A+ G DV+ +AK+G GKTA +VL LQ Q P +++L+L TREL Q+ E ERFS + +++V V+ + + LL++ P IV Sbjct: 42 SSSFADLGLDPRLLQAVAQQSFQKPTLVQSKAIPLALEGRDVLAKAKTGSGKTAAYVLPILQAVLKRKQINPGATYISSLILVPTRELTVQVTKEVERFSAFCAKEVQVVGLTDKVSDAVQRSLLQSSSPDIV 174
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: DHH1_NEOFI (ATP-dependent RNA helicase dhh1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dhh1 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 8.534e-17 Identity = 46/108 (42.59%), Postives = 64/108 (59.26%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNI 588 F DF +K EL+ I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++ P + AL+L TRELA Q + +L I V V GG + Sbjct: 49 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKSTKTQALILVPTRELALQTSQVCKTLGKHL-GINVMVTTGGTGL 155
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: DHH1_ASPFU (ATP-dependent RNA helicase dhh1 OS=Aspergillus fumigatus GN=dhh1 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 8.534e-17 Identity = 46/108 (42.59%), Postives = 64/108 (59.26%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNI 588 F DF +K EL+ I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++ P + AL+L TRELA Q + +L I V V GG + Sbjct: 49 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKSTKTQALILVPTRELALQTSQVCKTLGKHL-GINVMVTTGGTGL 155
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: DHH1_ASPCL (ATP-dependent RNA helicase dhh1 OS=Aspergillus clavatus GN=dhh1 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 8.534e-17 Identity = 46/108 (42.59%), Postives = 64/108 (59.26%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNI 588 F DF +K EL+ I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++ P + AL+L TRELA Q + +L I V V GG + Sbjct: 49 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKSTKTQALILVPTRELALQTSQVCKTLGKHL-GINVMVTTGGTGL 155
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: RRP3_CRYNE (ATP-dependent rRNA helicase RRP3 OS=Cryptococcus neoformans GN=RRP3 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.115e-16 Identity = 48/112 (42.86%), Postives = 65/112 (58.04%), Query Frame = 1 Query: 253 HSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNI 588 H+ F D + PEL RA GF+ PS++Q E IP A+ G D+I A++G GKTA F L LQ NP ALVL TRELAYQI + + + ++ AV GG+++ Sbjct: 36 HNKTFADLGISPELCRACASMGFKKPSDIQAEAIPHALEGKDIIGLAQTGSGKTAAFSLPILQTLWENPQPFFALVLAPTRELAYQISQQVTSLGSGI-GVRTAVLVGGMDM 146
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: DHH1_VANPO (ATP-dependent RNA helicase DHH1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=DHH1 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.456e-16 Identity = 45/109 (41.28%), Postives = 64/109 (58.72%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIK 591 F DF LK ELL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++ + ++ AL++ TRELA Q + I V GG N++ Sbjct: 36 FEDFYLKRELLMGIFEAGFEKPSPIQEESIPVALAGRDILARAKNGTGKTAAFVIPTLEKVKSKHNKIQALIMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGTNLR 143
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: DHH1_SCHPO (Putative ATP-dependent RNA helicase ste13 OS=Schizosaccharomyces pombe GN=ste13 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.456e-16 Identity = 43/109 (39.45%), Postives = 67/109 (61.47%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIK 591 F D+ LK ELL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ +L++ + ++ L+L TRELA Q + ++ ++KV V GG ++ Sbjct: 46 FEDYYLKRELLMGIFEAGFERPSPIQEESIPIALSGRDILARAKNGTGKTAAFVIPSLEKVDTKKSKIQTLILVPTRELALQTSQVCKTLGKHM-NVKVMVTTGGTTLR 153 The following BLAST results are available for this feature:
BLAST of CN181474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181474 ID=CN181474; Name=CN181474; organism=Citrus sinensis; type=EST; length=634bpback to top |