CN188561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PRS6B_ASPNG (26S protease regulatory subunit 6B homolog OS=Aspergillus niger GN=tbpA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.008e-21 Identity = 67/153 (43.79%), Postives = 82/153 (53.59%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATR---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITF-GLPDHENRQEIAAQYA 515 PR VL GPPGTGKT + +AN + V + KY GE R++ VF +A E + AIIF+DE+D+ A R A R RIL LL Q+DGFEQ V VI ATNR LDPAL+ R D I F L D R+ I + A Sbjct: 200 PRGVLLYGPPGTGKTMLVKAVANSTTASFIRVNGSEFVQKYLGEGPRMVRDVFRMARE-NSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFEQSSNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRERRLIFSTIA 351
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: AFG2_SCHPO (ATPase family gene 2 protein OS=Schizosaccharomyces pombe GN=afg2 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.008e-21 Identity = 60/144 (41.67%), Postives = 80/144 (55.56%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--ISRFDSMITFGLPDHENRQEI 500 PR VL GPPGTGKT R +A +A + + V+ KY GE+E L K+F A +IIF+DE+D+ A R ++ EA R ++ LL +DG KVVVIAATNR +D AL R + I G+PD R +I Sbjct: 313 PRGVLLYGPPGTGKTMVMRAVAAEANAQVFTIDGPSVVGKYLGETESRLRKIFEDARA-HQPSIIFIDEIDALAPKRTEDVSEAESRAVATLLTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDI 455 HSP 2 Score: 98.5969 bits (244), Expect = 3.478e-20 Identity = 62/192 (32.29%), Postives = 101/192 (52.60%), Query Frame = 3 Query: 45 ETRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIA---AQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQA 605 ET + P+ VL GPPG KT A+ IA + G+ + V + K+ GESER + +VF A + + ++IF DE+D+ R + ++ R+++ LL ++DG E + V+V+AATNR +DPAL+ R D ++ G P+ E R++I A+ K SG ++ +CQ+A Sbjct: 572 ETFSRLGVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKGPELFDKFVGESERAVRQVFQKARQ-ASPSVIFFDEIDALTANRGED--NSSDRVVAALLNELDGIEALRNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPPNFEARKQIVKIQAEKMKFAEDVDLDLIAEKTEGCSGAEVVALCQEA 760
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: SPAST_PIG (Spastin (Fragment) OS=Sus scrofa GN=SPAST PE=2 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 9.153e-21 Identity = 55/140 (39.29%), Postives = 83/140 (59.29%), Query Frame = 3 Query: 78 RAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQ--DKKVVVIAATNRKQDLDPALISRFDSMITFGLPDHENR 491 R +L GPPG GKT A+ +A ++ + + SKY GE E+L+ +F++A EL +IIF+DEVDS R H+A+RR+ + L + DG + D +V+V+ ATNR Q+LD A++ RF + LP+ E R Sbjct: 373 RGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVAREL-QPSIIFIDEVDSLLRERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIKRVYVSLPNEETR 511
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PSMR_THEGJ (Proteasome-activating nucleotidase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.153e-21 Identity = 64/166 (38.55%), Postives = 88/166 (53.01%), Query Frame = 3 Query: 18 PEVYDDIALETRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATR---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI 500 PE+++ + +E P+ VL GPPG GKT A+ +AN + V ++ K+ GE RL+ ++F +A E IIF+DE+D+ R E R R L LL ++DGF+ V VIAATNR LDPAL+ RFD +I LPD R EI Sbjct: 161 PELFEKVGIEP--------PKGVLLYGPPGCGKTLMAKAVANHVNATFIRVVGSELVRKFIGEGARLVHELFEMAKE-KAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFRGRLEI 317
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PRS7_PONAB (26S protease regulatory subunit 7 OS=Pongo abelii GN=PSMC2 PE=2 SV=3) HSP 1 Score: 100.523 bits (249), Expect = 9.153e-21 Identity = 64/185 (34.59%), Postives = 92/185 (49.73%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSE---MHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAKH---XXXXXXXXXXXXXXXMSGRDIRDVCQQA 605 P+ VL GPPGTGKT CAR +AN+ + V ++ KY GE R++ ++F +A +IF DE+D+ AR + +R + L+ Q+DGF+ + V+ ATNR LDPAL+ R D I F LPD E R I +A+ +G +IR VC +A Sbjct: 209 PKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMA-RTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHILKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 392
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PRS4A_ARATH (26S proteasome regulatory subunit 4 homolog A OS=Arabidopsis thaliana GN=RPT2A PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.153e-21 Identity = 66/204 (32.35%), Postives = 103/204 (50.49%), Query Frame = 3 Query: 18 PEVYDDIALETRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVAR---DSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAKH---XXXXXXXXXXXXXXXMSGRDIRDVCQQA 605 PE+Y+DI ++ P+ V+ G PGTGKT A+ +AN + V ++ KY G+ +L+ ++F +A++L + +I+F+DE+D+ R S +R + LL Q+DGF+ V VI ATNR + LDPAL+ R D I F LPD + R+ I + SG DI+ +C +A Sbjct: 211 PELYEDIGIKP--------PKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDL-SPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLSEDVNLEEFVMTKDEFSGADIKAICTEA 405
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: KTNA1_RAT (Katanin p60 ATPase-containing subunit A1 OS=Rattus norvegicus GN=Katna1 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.153e-21 Identity = 75/224 (33.48%), Postives = 107/224 (47.77%), Query Frame = 3 Query: 78 RAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVAR-DSEMHEATRRILSVLLRQIDGF-------EQDKKVVVIAATNRKQDLDPALISRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQAERSWASKIIRGQITKD-----GEQACLPPLQEYIESA 701 + VL GPPGTGKT A+ +A + V + SKY GESE+L+ +F +A + A IF+DE+DS R SE HEA+RR+ + LL Q+DG + K V+V+AATN D+D AL R + I LP + R+E+ + M SG DI +VC+ A + I G ++ E+ +P E E A Sbjct: 243 KGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMA-RFYSPATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRISLRELELADDVNLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSREEMHMPTTMEDFEMA 465
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: KTNA1_MACFA (Katanin p60 ATPase-containing subunit A1 OS=Macaca fascicularis GN=KATNA1 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.153e-21 Identity = 75/224 (33.48%), Postives = 107/224 (47.77%), Query Frame = 3 Query: 78 RAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVAR-DSEMHEATRRILSVLLRQIDGF-------EQDKKVVVIAATNRKQDLDPALISRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQAERSWASKIIRGQITKD-----GEQACLPPLQEYIESA 701 + VL GPPGTGKT A+ +A + V + SKY GESE+L+ +F +A + A IF+DE+DS R SE HEA+RR+ + LL Q+DG + K V+V+AATN D+D AL R + I LP + R+E+ + M SG DI +VC+ A + I G ++ E+ +P E E A Sbjct: 243 KGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMA-RFYSPATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRISLRELELADDVDLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSKEEMHMPTTMEDFEMA 465
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: KTNA1_HUMAN (Katanin p60 ATPase-containing subunit A1 OS=Homo sapiens GN=KATNA1 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.153e-21 Identity = 75/224 (33.48%), Postives = 107/224 (47.77%), Query Frame = 3 Query: 78 RAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVAR-DSEMHEATRRILSVLLRQIDGF-------EQDKKVVVIAATNRKQDLDPALISRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQAERSWASKIIRGQITKD-----GEQACLPPLQEYIESA 701 + VL GPPGTGKT A+ +A + V + SKY GESE+L+ +F +A + A IF+DE+DS R SE HEA+RR+ + LL Q+DG + K V+V+AATN D+D AL R + I LP + R+E+ + M SG DI +VC+ A + I G ++ E+ +P E E A Sbjct: 243 KGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMA-RFYSPATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRISLRELELADDVDLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSKEEMHMPTTMEDFEMA 465
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: SPAST_CHICK (Spastin OS=Gallus gallus GN=SPAST PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.195e-20 Identity = 53/140 (37.86%), Postives = 83/140 (59.29%), Query Frame = 3 Query: 78 RAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQ--DKKVVVIAATNRKQDLDPALISRFDSMITFGLPDHENR 491 R +L GPPG GKT A+ +A ++ + + SKY GE E+L+ +F++A EL +IIF+DEVDS R H+A+RR+ + L + DG + + +++V+ ATNR Q+LD A++ RF + LP+ E R Sbjct: 373 RGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVAREL-QPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSSGEDRILVMGATNRPQELDDAVLRRFTKRVYVSLPNEETR 511 The following BLAST results are available for this feature:
BLAST of CN188561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 381
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188561 ID=CN188561; Name=CN188561; organism=Citrus sinensis; type=EST; length=707bpback to top |