CN188561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PEX6_MOUSE (Peroxisome assembly factor 2 OS=Mus musculus GN=Pex6 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.158e-15 Identity = 58/197 (29.44%), Postives = 92/197 (46.70%), Query Frame = 3 Query: 72 RPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVA--RDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQ-----EIAAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQAERSWASKIIR 635 R +L GPPGTGKT A+ +A + + + V +++ Y G+SE + +VF+ A IIF DE+DS A + R + R++S LL ++DG + V VI ATNR LDPAL+ RFD ++ G + Q I ++ ++G D+ +C A + + +R Sbjct: 737 RRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAA-PCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLANVLDCCPPQLTGADLYSLCSDAMMTALKRRVR 932
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PEX6_GLOLA (Peroxisomal biogenesis factor 6 OS=Glomerella lagenarium GN=PEX6 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.158e-15 Identity = 55/145 (37.93%), Postives = 79/145 (54.48%), Query Frame = 3 Query: 84 VLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHE--ATRRILSVLLRQIDGF----EQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQ 494 +LF GPPGTGKT A+ IA + + V +++ Y GESE + +VF A + ++F DE+DS A R ++ RI+S LL ++DG + V VI ATNR LDPAL+ RFD M+ G+ D ++Q Sbjct: 1030 ILFYGPPGTGKTLLAKAIATEYSLNFFSVKGPELLNMYIGESEANVRRVFQRARD-ARPCVVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGGDDTSGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSDTHDKQ 1173
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: FTSH1_ARATH (Cell division protease ftsH homolog 1, chloroplastic OS=Arabidopsis thaliana GN=FTSH1 PE=1 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.158e-15 Identity = 51/153 (33.33%), Postives = 79/153 (51.63%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEM---HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAK 518 P+ L GPPGTGKT AR +A +AGVP + + G + +F A I+F+DE+D+ R + M ++ + ++ LL ++DGF + V+V+AATNR LD AL+ RFD +T PD R +I +++ Sbjct: 295 PKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKS-KAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSR 446
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PEX6_NEUCR (Peroxisomal biogenesis factor 6 OS=Neurospora crassa GN=pex-6 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.512e-15 Identity = 55/145 (37.93%), Postives = 79/145 (54.48%), Query Frame = 3 Query: 84 VLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHE--ATRRILSVLLRQIDGFEQDK----KVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQ 494 +LF GPPGTGKT A+ IA + + V +++ Y GESE + +VF A + ++F DE+DS A R ++ RI+S LL ++DG + V VI ATNR LDPAL+ RFD M+ G+ D ++Q Sbjct: 1027 ILFYGPPGTGKTLLAKAIATEYSLNFFSVKGPELLNMYIGESEANVRRVFQRARD-ARPCVVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGGEGGGGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSDTHDKQ 1170
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: FTSH_TOBAC (Cell division protease ftsH homolog, chloroplastic OS=Nicotiana tabacum GN=FTSH PE=2 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.512e-15 Identity = 51/153 (33.33%), Postives = 79/153 (51.63%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEM---HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAK 518 P+ L GPPGTGKT AR +A +AGVP + + G + +F A I+F+DE+D+ R + M ++ + ++ LL ++DGF + V+V+AATNR LD AL+ RFD +T PD R +I +++ Sbjct: 286 PKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKS-KAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRIKILQVHSR 437
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: FTSH_RICBR (Cell division protease ftsH homolog OS=Rickettsia bellii (strain RML369-C) GN=ftsH PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.512e-15 Identity = 54/153 (35.29%), Postives = 81/153 (52.94%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEM---HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAK 518 P+ L GPPGTGKT A+ IA +A VP + + + G + +F + IIF+DE+D+ R M ++ + L+ +L ++DGFE ++ VV+IAATNR LD AL+ RFD IT PD + R++I + K Sbjct: 188 PKGCLLIGPPGTGKTLLAKAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFE-QGKRNAPCIIFIDEIDAVGRHRGIGMGGGNDEREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDNALLRPGRFDRQITVSNPDIDGREKILQVHLK 339
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PEX6_HUMAN (Peroxisome assembly factor 2 OS=Homo sapiens GN=PEX6 PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.975e-15 Identity = 51/137 (37.23%), Postives = 75/137 (54.74%), Query Frame = 3 Query: 72 RPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVA--RDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFG 470 R +L GPPGTGKT A+ +A + + + V +++ Y G+SE + +VF+ A IIF DE+DS A + R + R++S LL ++DG + V VI ATNR LDPAL+ RFD ++ G Sbjct: 736 RRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAA-PCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVG 871
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: YKX4_SCHPO (Uncharacterized AAA domain-containing protein C328.04 OS=Schizosaccharomyces pombe GN=SPAC328.04 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.580e-15 Identity = 58/162 (35.80%), Postives = 83/162 (51.23%), Query Frame = 3 Query: 78 RAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVAR--DSEMHEATRRILSVLLRQIDGFEQ---------DKKVVVIAATNRKQDLDPALISRFDSMITFGLPDHENRQ---EIAAQYAKH 521 R +L GPPGTGKT AR +A ++ + + SK+ GESE+L+ +F+LA +L + +IIF+DE+DS AR D HE +RRI + L Q + +V+V+AATN +D A RF LPD R+ +Y KH Sbjct: 493 RGMLLFGPPGTGKTMLARAVATESRSVFFSISASSLTSKFLGESEKLVRALFTLAKKL-SPSIIFVDEIDSLLSARSSDGNEHETSRRIKTEFLIQWSSLARAAASRQTADHPRVLVLAATNLPWCIDDAARRRFVRRTYIPLPDETTRRLHLNNLLKYQKH 653
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: FTSH_HELPY (Cell division protease ftsH homolog OS=Helicobacter pylori GN=ftsH PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.580e-15 Identity = 53/155 (34.19%), Postives = 83/155 (53.55%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDS----EMHEATRRILSVLLRQIDGF-EQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAK 518 P+ VL GPPGTGKT A+ +A +A VP + + + G + +F A + +IIF+DE+D+ +R + ++ + L+ LL ++DGF ++ V+V+AATNR + LDPAL+ RFD + PD R EI + K Sbjct: 203 PKGVLLVGPPGTGKTLLAKAVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKK-QAPSIIFIDEIDAIGKSRAAGGVVSGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALMRPGRFDRQVLVDKPDFNGRVEILKVHIK 356
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: FTSH_HELPJ (Cell division protease ftsH homolog OS=Helicobacter pylori J99 GN=ftsH PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.580e-15 Identity = 53/155 (34.19%), Postives = 83/155 (53.55%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDS----EMHEATRRILSVLLRQIDGF-EQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAK 518 P+ VL GPPGTGKT A+ +A +A VP + + + G + +F A + +IIF+DE+D+ +R + ++ + L+ LL ++DGF ++ V+V+AATNR + LDPAL+ RFD + PD R EI + K Sbjct: 203 PKGVLLVGPPGTGKTLLAKAVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKK-QAPSIIFIDEIDAIGKSRAAGGMISGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALMRPGRFDRQVLVDKPDFNGRVEILKVHIK 356 The following BLAST results are available for this feature:
BLAST of CN188561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 381
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188561 ID=CN188561; Name=CN188561; organism=Citrus sinensis; type=EST; length=707bpback to top |