CN188561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PEX6_PICPA (Peroxisomal biogenesis factor 6 OS=Pichia pastoris GN=PEX6 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.747e-15 Identity = 56/147 (38.10%), Postives = 78/147 (53.06%), Query Frame = 3 Query: 84 VLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVAR--DSEMHEATRRILSVLLRQIDGF---EQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPD-HENRQEI 500 +LF GPPGTGKT A+ IA + V +++ Y GESE + KVF A + ++F DE+DS A R + RI+S LL ++DG + V V+ ATNR LD AL+ RFD M+ G+ D HE + +I Sbjct: 855 ILFYGPPGTGKTLLAKAIATNFALNFFSVKGPELLNMYIGESEANVRKVFQRARD-AKPCVVFFDELDSVAPKRGNQGDSEGVMDRIVSQLLAELDGMSGGDGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGVSDTHEKQSKI 1000
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PEX6_PICAN (Peroxisomal biogenesis factor 6 OS=Pichia angusta GN=PEX6 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.747e-15 Identity = 57/147 (38.78%), Postives = 79/147 (53.74%), Query Frame = 3 Query: 84 VLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHE--ATRRILSVLLRQIDGF---EQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPD-HENRQEI 500 +LF GPPGTGKT A+ IA + V +++ Y GESE + +VF A + +IF DE+DS A R ++ RI+S LL ++DG E V V+ ATNR LD AL+ RFD M+ G+ D HE + +I Sbjct: 849 ILFYGPPGTGKTLLAKAIATNFALNFFSVKGPELLNMYIGESEANVRRVFQKARD-AKPCVIFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGAEGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGIADTHEKQAKI 994
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: AFG32_BOVIN (AFG3-like protein 2 OS=Bos taurus GN=AFG3L2 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.747e-15 Identity = 60/209 (28.71%), Postives = 93/209 (44.50%), Query Frame = 3 Query: 15 SPEVYDDIALETRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVAR---DSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM-------SGRDIRDVCQQA 605 +P+ Y D+ + P+ + GPPGTGKT A+ A +A VP + V + + G + +F+LA + I+F+DE+D+ R + L+ LL ++DGF VV++A TNR LDPAL+ RFD I G PD + R I + + + SG D+ +VC +A Sbjct: 330 NPKQYQDLGAKI--------PKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARK-NAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCNEA 529
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PEX6_DICDI (Peroxisomal biogenesis factor 6 OS=Dictyostelium discoideum GN=pex6 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15 Identity = 47/141 (33.33%), Postives = 79/141 (56.03%), Query Frame = 3 Query: 84 VLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVAR--DSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQ 494 +L GPPGTGKT A+ IA + + + V +++ Y GESE+ + ++F+ A + +IF DE+DS A +R ++ R++S LL ++DG ++ V +I ATNR LD +L+ R D ++ G+ + Q Sbjct: 955 ILLFGPPGTGKTLLAKAIATECSLNFLSVKGPELINMYIGESEKNIREIFNKARQ-AKPCVIFFDELDSLAPSRGNGADSGGVMDRVVSQLLAELDGMQKSSDVFIIGATNRPDLLDSSLMRPGRLDRLLYLGISSEKENQ 1094
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PEX1_PICPA (Peroxisome biosynthesis protein PAS1 OS=Pichia pastoris GN=PEX1 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15 Identity = 57/196 (29.08%), Postives = 94/196 (47.96%), Query Frame = 3 Query: 84 VLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXMSGRDIRDVCQQAERSWASKIIRGQITKDGEQA 665 +L G PG GKT A +A Q G+ + + +++KY G SE+ + ++F A + I+F DE DS A R + T R+++ +L Q+DG E V V+AAT+R +D AL+ R D + +PD ++R +I ++ SG D+ A ++ K + ++TKD A Sbjct: 836 ILLYGYPGCGKTLLASAVAAQCGLNFISIKGPEILNKYIGPSEQSVRELFERA-QAAKPCILFFDEFDSIAPKRGHDSTGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPDFDDRLDILQSVTRNMNVSKSVNLSSVAGECSGFSGADLQALAYNAYL-KAVHEKLTKDESMA 1029
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: FTSH_RICTY (Cell division protease ftsH homolog OS=Rickettsia typhi GN=ftsH PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15 Identity = 53/153 (34.64%), Postives = 79/153 (51.63%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEM---HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAK 518 P+ L GPPGTGKT A+ IA +A VP + + + G + +F + IIF+DE+D+ R M ++ + L+ +L ++DGFE ++ VV+IAATNR LD AL+ RFD I PD R++I + K Sbjct: 188 PKGCLLIGPPGTGKTLLAKAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFE-QGKRNAPCIIFIDEIDAVGRHRGIGMGGGNDEREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQILKVHLK 339
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: FTSH_RICPR (Cell division protease ftsH homolog OS=Rickettsia prowazekii GN=ftsH PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15 Identity = 53/153 (34.64%), Postives = 79/153 (51.63%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEM---HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAK 518 P+ L GPPGTGKT A+ IA +A VP + + + G + +F + IIF+DE+D+ R M ++ + L+ +L ++DGFE ++ VV+IAATNR LD AL+ RFD I PD R++I + K Sbjct: 188 PKGCLLIGPPGTGKTLLAKAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFE-QGKRNAPCIIFIDEIDAVGRHRGIGMGGGNDEREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQILKVHLK 339
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: FTSH_RICFE (Cell division protease ftsH homolog OS=Rickettsia felis GN=ftsH PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15 Identity = 53/153 (34.64%), Postives = 79/153 (51.63%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEM---HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAK 518 P+ L GPPGTGKT A+ IA +A VP + + + G + +F + IIF+DE+D+ R M ++ + L+ +L ++DGFE ++ VV+IAATNR LD AL+ RFD I PD R++I + K Sbjct: 188 PKGCLLIGPPGTGKTLLAKAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFE-QGKRNAPCIIFIDEIDAVGRHRGIGMGGGNDEREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQILKVHLK 339
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: FTSH_RICCN (Cell division protease ftsH homolog OS=Rickettsia conorii GN=ftsH PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15 Identity = 53/153 (34.64%), Postives = 79/153 (51.63%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEM---HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAK 518 P+ L GPPGTGKT A+ IA +A VP + + + G + +F + IIF+DE+D+ R M ++ + L+ +L ++DGFE ++ VV+IAATNR LD AL+ RFD I PD R++I + K Sbjct: 188 PKGCLLIGPPGTGKTLLAKAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFE-QGKRNAPCIIFIDEIDAVGRHRGIGMGGGNDEREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQILKVHLK 339
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: FTSH_MEDSA (Cell division protease ftsH homolog, chloroplastic OS=Medicago sativa GN=FTSH PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15 Identity = 49/153 (32.03%), Postives = 78/153 (50.98%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEM---HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAK 518 P+ L GPPGTGKT AR +A +AG P + + G + +F A I+F+DE+D+ R + + ++ + ++ LL ++DGF + V+V+AATNR LD AL+ RFD +T PD R +I +++ Sbjct: 286 PKGCLLVGPPGTGKTLLARAVAGEAGTPFFSCAASEFVELFVGVGASRVRDLFEKAKS-KAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSR 437 The following BLAST results are available for this feature:
BLAST of CN188561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 381
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188561 ID=CN188561; Name=CN188561; organism=Citrus sinensis; type=EST; length=707bpback to top |