CN188561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PEX1_DICDI (Peroxisome biogenesis factor 1 OS=Dictyostelium discoideum GN=pex1 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.802e-15 Identity = 50/141 (35.46%), Postives = 75/141 (53.19%), Query Frame = 3 Query: 84 VLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI 500 +L GP G GKT A IA + G+ + V +++KY G SE+ + VFS A+ ++F DE DS A R + T R+++ L Q+DG E V V+AAT+R +DPAL+ R D + +P+ R +I Sbjct: 903 ILLYGPTGCGKTLLASAIAGECGLNFISVKGPELLNKYIGSSEQGVRDVFSRASSA-KPCVLFFDEFDSIAPRRGHDNSGVTDRVVNQFLTQLDGVEGLTGVYVLAATSRPDLIDPALLRPGRLDKSLYCNIPEFNERLDI 1042
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: FTSH_CAPAN (Cell division protease ftsH homolog, chloroplastic (Fragment) OS=Capsicum annuum GN=FTSH PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.802e-15 Identity = 49/153 (32.03%), Postives = 78/153 (50.98%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEM---HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAK 518 P+ L GPPGTGKT AR +A +AGVP + + G + +F A I+F+DE+D+ R + + ++ + ++ LL ++DGF + V+V+AATNR LD AL+ +FD +T PD R I +++ Sbjct: 263 PKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRHLFENAKS-KAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGKFDRQVTVDRPDVAGRVRILQVHSR 414
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: YME1_SCHMA (Protein YME1 homolog OS=Schistosoma mansoni PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.280e-14 Identity = 48/151 (31.79%), Postives = 79/151 (52.32%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARD-SEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAK 518 P+ VL GPPG GKT A+ ++ +A VP +Y G + ++F+ A + + ++F+DE+DS R S H + ++ LL ++DGF+ + ++V+ ATN+ + LD AL+ RFD I P +E R + Y K Sbjct: 199 PKGVLLVGPPGVGKTLLAKAVSGEAQVPFLYASGSSFDEVLVGLGASRIRQLFTTAKQ-NSPCLVFIDEIDSVGGNRTFSPHHPFANQTINQLLAEMDGFQSKEGIIVLGATNQAEVLDKALLRPGRFDVQIHVSPPTYEGRIALLNLYLK 348
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PEX6_DEBHA (Peroxisomal biogenesis factor 6 OS=Debaryomyces hansenii GN=PEX6 PE=3 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.280e-14 Identity = 54/146 (36.99%), Postives = 77/146 (52.74%), Query Frame = 3 Query: 84 VLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHE--ATRRILSVLLRQIDGFEQDKK-----VVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQ 494 +LF GPPGTGKT A+ IA + V +++ Y GESE + +VF A + +IF DE+DS A R ++ RI+S LL ++DG + V V+ ATNR LD AL+ RFD M+ G+ D + +Q Sbjct: 875 ILFYGPPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARD-AKPCVIFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGGAEGGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGISDTDEKQ 1019
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: AFG31_MOUSE (AFG3-like protein 1 OS=Mus musculus GN=Afg3l1 PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.672e-14 Identity = 53/167 (31.74%), Postives = 79/167 (47.31%), Query Frame = 3 Query: 15 SPEVYDDIALETRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEM---HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI 500 +P+ Y D+ + P+ + GPPGTGKT A+ A +A VP + V + + G + +F++A + I+F+DE+D+ R L+ +L ++DGF VVV+A TNR LDPAL RFD I G PD + R I Sbjct: 321 NPKQYQDLGAKI--------PKGAMLTGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDMFAMARK-HAPCILFIDEIDAIGRKRGRGHLGGQSEQENTLNQMLVEMDGFNSSTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPDIKGRSSI 478
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: MPA_RHOER (Proteasome-associated ATPase OS=Rhodococcus erythropolis GN=mpa PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14 Identity = 53/167 (31.74%), Postives = 85/167 (50.90%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPL---------------MYVPLEVVMSKYYGESERLLGKVFSLANELPNGA---IIFLDEVDSFAVARDSEMH-EATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQY 512 P+ VL GPPG GKT A+ +AN + + + +++K+ GE+ER + +F A E + I+F DE+DS R S + + ++ LL +IDG E + V+VI A+NR+ +DPA++ R D I PD E+ Q+I ++Y Sbjct: 268 PKGVLLYGPPGCGKTLIAKAVANSLAKKIAEARGQDSKDAKSYFLNIKGPELLNKFVGETERHIRMIFQRAREKASEGTPVIVFFDEMDSIFRTRGSGVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAESAQDIFSKY 434
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: FIGN_MOUSE (Fidgetin OS=Mus musculus GN=Fign PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.725e-14 Identity = 51/183 (27.87%), Postives = 88/183 (48.09%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGF--EQDKKVVVIAATNRKQDLDPALISRFDSMITFGLPDHENRQEIAAQYAKH----XXXXXXXXXXXXXXXMSGRDIRDVCQQA 605 PR++L GP GTGKT R IA+Q G + +++K+ GE+E+++ F +A ++IF+ ++D ++ SE H R+ + L Q+D + ++VVI AT++ +++D +L F + LPD R +I Q SG D+ +CQ+A Sbjct: 519 PRSILLFGPRGTGKTLLGRCIASQLGATFFKIAGSGLVAKWIGEAEKIIHASFLVA-RCRQPSVIFVSDIDMLLSSQVSEEHSPVSRMRTEFLMQLDTVLTSAEDQIVVICATSKPEEIDESLRRYFMKRLLIPLPDSTARHQIIVQLLTQHNYCLNDKEFALLVQRTEGFSGLDVAHLCQEA 700
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PEX6_ASHGO (Peroxisomal biogenesis factor 6 OS=Ashbya gossypii GN=PEX6 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14 Identity = 52/142 (36.62%), Postives = 75/142 (52.82%), Query Frame = 3 Query: 84 VLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHE--ATRRILSVLLRQIDGFEQ-DKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQ 494 +LF GPPGTGKT A+ +A + V +++ Y GESE + +VF A + +IF DE+DS A R ++ RI+S LL ++DG + VI ATNR LD AL+ RFD ++ G+ D +Q Sbjct: 759 ILFYGPPGTGKTLLAKAVATNFSLNFFSVKGPELLNMYIGESEANVRRVFQRARD-AKPCVIFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGLSTGGDGLFVIGATNRPDLLDEALLRPGRFDKLLYLGISDTNEKQ 899
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: FIGN_HUMAN (Fidgetin OS=Homo sapiens GN=FIGN PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14 Identity = 50/183 (27.32%), Postives = 88/183 (48.09%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGF--EQDKKVVVIAATNRKQDLDPALISRFDSMITFGLPDHENRQEIAAQYAKH----XXXXXXXXXXXXXXXMSGRDIRDVCQQA 605 PR++L GP GTGKT R IA+Q G + +++K+ GE+E+++ F +A ++IF+ ++D ++ +E H R+ + L Q+D + ++VVI AT++ +++D +L F + LPD R +I Q SG D+ +CQ+A Sbjct: 519 PRSILLFGPRGTGKTLLGRCIASQLGATFFKIAGSGLVAKWLGEAEKIIHASFLVA-RCRQPSVIFVSDIDMLLSSQVNEEHSPVSRMRTEFLMQLDTVLTSAEDQIVVICATSKPEEIDESLRRYFMKRLLIPLPDSTARHQIIVQLLSQHNYCLNDKEFALLVQRTEGFSGLDVAHLCQEA 700
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: SUR2_SCHPO (Protein sur2 OS=Schizosaccharomyces pombe GN=sur2 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.084e-13 Identity = 52/149 (34.90%), Postives = 78/149 (52.35%), Query Frame = 3 Query: 78 RAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARD--SEMHEATRRILSVLLRQ---IDGFEQDK------KVVVIAATNRKQDLDPALISRFDSMITFGLPDHENR 491 + +L GPPGTGKT AR +A +A + + SKY G+SE+L+ +F +A ++IF+DE+DS AR+ HE++RR+ + L Q + DK +V+V+AATN +D A RF LP+ E R Sbjct: 413 QGMLLFGPPGTGKTMLARAVATEAKATFFSISASSLTSKYLGDSEKLVRALFEVAKR-QTCSVIFVDEIDSILSARNDSGNEHESSRRLKTEFLIQWSSLTNAAPDKQTGHSPRVLVLAATNLPWCIDEAARRRFVKRTYIPLPEKETR 560 The following BLAST results are available for this feature:
BLAST of CN188561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 381
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188561 ID=CN188561; Name=CN188561; organism=Citrus sinensis; type=EST; length=707bpback to top |