CN188561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PEX1_YEAST (Peroxisomal ATPase PEX1 OS=Saccharomyces cerevisiae GN=PEX1 PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.084e-13 Identity = 51/163 (31.29%), Postives = 81/163 (49.69%), Query Frame = 3 Query: 18 PEVYDDIALETRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI 500 P Y+ I + + S +L G PG GKT A +A Q G+ + V +++K+ G SE+ + ++F A + I+F DE DS A R + T R+++ LL Q+DG E V ++AAT+R +D AL+ R D + +P R +I Sbjct: 716 PTKYEPIFVNCPLRLRSG----ILLYGYPGCGKTLLASAVAQQCGLNFISVKGPEILNKFIGASEQNIRELFERAQSV-KPCILFFDEFDSIAPKRGHDSTGVTDRVVNQLLTQMDGAEGLDGVYILAATSRPDLIDSALLRPGRLDKSVICNIPTESERLDI 873
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: MPA_MYCTU (Proteasome-associated ATPase OS=Mycobacterium tuberculosis GN=mpa PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.084e-13 Identity = 53/167 (31.74%), Postives = 85/167 (50.90%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIAN---------------QAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGA---IIFLDEVDSFAVARDSEMH-EATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQY 512 P+ VL GPPG GKT A+ +AN +A + + +++K+ GE+ER + +F A E + I+F DE+DS R + + + ++ LL +IDG E + V+VI A+NR+ +DPA++ R D I PD E Q+I ++Y Sbjct: 286 PKGVLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSIFRTRGTGVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQDIYSKY 452
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: MPA_MYCLE (Proteasome-associated ATPase OS=Mycobacterium leprae GN=mpa PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.084e-13 Identity = 53/167 (31.74%), Postives = 85/167 (50.90%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIAN---------------QAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGA---IIFLDEVDSFAVARDSEMH-EATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQY 512 P+ VL GPPG GKT A+ +AN +A + + +++K+ GE+ER + +F A E + I+F DE+DS R + + + ++ LL +IDG E + V+VI A+NR+ +DPA++ R D I PD E Q+I ++Y Sbjct: 286 PKGVLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAREAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSIFRTRGTGVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQDIYSKY 452
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: MPA_MYCBO (Proteasome-associated ATPase OS=Mycobacterium bovis GN=mpa PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.084e-13 Identity = 53/167 (31.74%), Postives = 85/167 (50.90%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIAN---------------QAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGA---IIFLDEVDSFAVARDSEMH-EATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQY 512 P+ VL GPPG GKT A+ +AN +A + + +++K+ GE+ER + +F A E + I+F DE+DS R + + + ++ LL +IDG E + V+VI A+NR+ +DPA++ R D I PD E Q+I ++Y Sbjct: 286 PKGVLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSIFRTRGTGVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQDIYSKY 452
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: FIGN_DANRE (Fidgetin OS=Danio rerio GN=fign PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.175e-13 Identity = 50/183 (27.32%), Postives = 90/183 (49.18%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGF--EQDKKVVVIAATNRKQDLDPALISRFDSMITFGLPDHENRQEIAAQYAKH----XXXXXXXXXXXXXXXMSGRDIRDVCQQA 605 PR++L GP GTG+T R +A+Q G + + +++K+ GE E+++ F +A +++F+ +VD ++ SE RI S LL Q+DG ++ V+V+ +T++ +++D +L F + LPD R +I +Q SG D+ +CQ+A Sbjct: 497 PRSILLFGPQGTGRTLLGRCMASQLGAAFLLLSGSALVTKWLGEGEKIVQASFLIA-RCRQPSVVFISDVDLLLSSQLSE-ESPVNRIKSELLLQLDGVLSSPEEHVLVVCSTSKPEEIDESLRRYFVKRLLVPLPDATARHQIISQLLSQHNYCLSDKEVTLLVQRTDGFSGLDVVRLCQEA 677
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: FTSHC_ARATH (Cell division protease ftsH homolog 12, chloroplastic OS=Arabidopsis thaliana GN=FTSH12 PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 51/153 (33.33%), Postives = 78/153 (50.98%), Query Frame = 3 Query: 78 RAVLFEGPPGTGKTSCARVIANQAGVPLMYVP-LEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDG---------FEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI 500 R VL GPPGTGKT AR +A ++G+P ++ E S+ G ++ + ++FS+A A +F+DE+D+ A R + R L+ Q+DG F + V+ I ATNR +LD + R D + GLPD + R +I Sbjct: 527 RGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSEKSGAAK--INEMFSIARR-NAPAFVFVDEIDAIA-GRHARKDPRRRATFEALIAQLDGEKEKTGIDRFSLRQAVIFICATNRPDELDLEFVRSGRIDRRLYIGLPDAKQRVQI 675
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: ATAD3_RAT (ATPase family AAA domain-containing protein 3 OS=Rattus norvegicus GN=Atad3 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 52/162 (32.10%), Postives = 81/162 (50.00%), Query Frame = 3 Query: 33 DIALETR-CKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSE-MHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALISRFDSMITFGLPDHENRQEIAAQY 512 DIA+ TR K + R VL GPPGTGKT A+ +A +G+ + V + E + KVF A+ G ++F+DE D+F R +E + E R L+ L + + K +++ A+N+ + D A+ R D M+ F LP E R+ + Y Sbjct: 329 DIAIATRNTKKNKSLYRNVLMYGPPGTGKTLFAKKLALHSGMDYAIMTGGDV-APMGREGVTAMHKVFDWASTSRRGLLLFVDEADAFLRKRATEKISEDLRATLNAFLHRTG--QHSNKFMLVLASNQPEQFDWAINDRIDEMVCFALPQREERERLVRMY 487
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: ATAD3_MOUSE (ATPase family AAA domain-containing protein 3 OS=Mus musculus GN=Atad3 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 52/162 (32.10%), Postives = 81/162 (50.00%), Query Frame = 3 Query: 33 DIALETR-CKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSE-MHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALISRFDSMITFGLPDHENRQEIAAQY 512 DIA+ TR K + R VL GPPGTGKT A+ +A +G+ + V + E + KVF A+ G ++F+DE D+F R +E + E R L+ L + + K +++ A+N+ + D A+ R D M+ F LP E R+ + Y Sbjct: 329 DIAIATRNTKKNKSLYRNVLMYGPPGTGKTLFAKKLALHSGMDYAIMTGGDV-APMGREGVTAMHKVFDWASTSRRGLLLFVDEADAFLRKRATEKISEDLRATLNAFLHRTG--QHSSKFMLVLASNQPEQFDWAINDRIDEMVCFALPQREERERLVRMY 487
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: NSF2_DROME (Vesicle-fusing ATPase 2 OS=Drosophila melanogaster GN=Nsf2 PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12 Identity = 54/162 (33.33%), Postives = 82/162 (50.62%), Query Frame = 3 Query: 78 RAVLFEGPPGTGKTSCARVIANQAGV-PLMYVPLEVVMSKYYGESERLLGKVFSLANEL-----PNGA--IIFLDEVDSFAVAR-----DSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAK 518 + +L GPPGTGKT AR I V ++ KY GESE + ++F+ A E PN II DE+D+ AR +S +H+ +++ LL +IDG EQ ++VI TNR+ +D AL+ R + + LP+ + R +I + K Sbjct: 259 KGILLYGPPGTGKTLMARQIGTMLNAREPKIVNGPQILDKYVGESEANIRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKARGSVAGNSGVHDT---VVNQLLAKIDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTK 417
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: ATAD3_BOVIN (ATPase family AAA domain-containing protein 3 OS=Bos taurus GN=ATAD3 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.669e-12 Identity = 51/162 (31.48%), Postives = 82/162 (50.62%), Query Frame = 3 Query: 33 DIALETR-CKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSE-MHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALISRFDSMITFGLPDHENRQEIAAQY 512 DIA+ TR K + R VL GPPGTGKT A+ +A +G+ + V + + + KVF A+ G ++F+DE D+F R +E + E R L+ L + + K +++ A+N+ + D A+ R D M++F LP E R+ + Y Sbjct: 329 DIAIATRNTKKNKSLYRNVLMYGPPGTGKTLFAKKLALHSGMDYAIMTGGDV-APMGRDGVTAMHKVFDWASTSRRGLLLFVDEADAFLRKRATEKISEDLRATLNAFLHRTG--QHSSKFMLVLASNQPEQFDWAINDRIDEMVSFELPQREERERLVRMY 487 The following BLAST results are available for this feature:
BLAST of CN188561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 381
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188561 ID=CN188561; Name=CN188561; organism=Citrus sinensis; type=EST; length=707bpback to top |