CN188561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: AFG2_YEAST (ATPase family gene 2 protein OS=Saccharomyces cerevisiae GN=AFG2 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.277e-22 Identity = 62/162 (38.27%), Postives = 90/162 (55.56%), Query Frame = 3 Query: 39 ALETRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAK 518 A ET + + P+ VL GPPG KT A+ +A ++G+ + V + +KY GESER + ++F A +IIF DE+D+ + RD A +L+ LL +IDG E+ K VV++AATNR ++D AL+ R D I G PD R EI + K Sbjct: 538 ASETFARLGISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESERAIREIFRKARSAAP-SIIFFDEIDALSPDRDGSSTSAANHVLTSLLNEIDGVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNARLEILKKCTK 698 HSP 2 Score: 105.531 bits (262), Expect = 2.845e-22 Identity = 62/150 (41.33%), Postives = 89/150 (59.33%), Query Frame = 3 Query: 60 FESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVAR-DSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--ISRFDSMITFGLPDHENRQEI 500 F + PR +L GPPGTGKT RV+AN + ++ + ++SKY GE+E L +F+ A + +IIF+DE+DS A R + + E R+++ LL +DG KVVVIAATNR +DPAL RFD + G+PD + R +I Sbjct: 274 FGVSPPRGILLHGPPGTGKTMLLRVVANTSNAHVLTINGPSIVSKYLGETEAALRDIFNEARKY-QPSIIFIDEIDSIAPNRANDDSGEVESRVVATLLTLMDGMGAAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDARFDI 422
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: ATD1B_DANRE (ATPase family AAA domain-containing protein 1-B OS=Danio rerio GN=atad1b PE=2 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 1.668e-22 Identity = 67/199 (33.67%), Postives = 104/199 (52.26%), Query Frame = 3 Query: 36 IALETRCKFESNR----PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDK--KVVVIAATNRKQDLDPALISRFDSMITFGLPDHENRQEIAAQYAKH---XXXXXXXXXXXXXXXMSGRDIRDVCQQA 605 + ++ R FE +R P+ VL GPPG GKT A+ A +AG + + + K+YGES++L VFSLA +L +IIF+DE+DSF R S HEAT + + + DG + D +V+++ ATNR QDLD A++ R + P+ R++I ++ SG D+R++C+ A Sbjct: 113 LPIQKRHLFEGSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGFRFINLQPSTLTDKWYGESQKLAAAVFSLAIKL-QPSIIFIDEIDSFLRNRSSSDHEATAMMKAQFMSLWDGLDTDYNCQVIIMGATNRPQDLDSAILRRMPTRFHINQPNVRQRKDILKLILENENVESAVELSEIAKQTDGFSGSDLREMCRDA 310
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PSMR_METTH (Proteasome-activating nucleotidase OS=Methanobacterium thermoautotrophicum GN=pan PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.179e-22 Identity = 64/166 (38.55%), Postives = 92/166 (55.42%), Query Frame = 3 Query: 18 PEVYDDIALETRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVAR---DSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI 500 PE+++ I +E P+ VL GPPGTGKT A+ +A++ + + + KY GE RL+ VF LA E + +IIF+DE+D+ A R + +R L LL ++DGFE V ++AATNR LDPAL+ RFD I LP+ + R+EI Sbjct: 174 PELFEKIGIEP--------PKGVLLYGPPGTGKTLLAKAVAHETNATFIKIVASEFVRKYIGEGARLVRGVFELAKE-KSPSIIFIDEIDAVAAKRLKSSTSGDREVQRTLMQLLAELDGFESRGNVGIVAATNRPDILDPALLRPGRFDRFIEVPLPNEDGRREI 330
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PRS6B_SOLTU (26S protease regulatory subunit 6B homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.179e-22 Identity = 67/145 (46.21%), Postives = 81/145 (55.86%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATR---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQ 494 PR VL GPPGTGKT A+ +A+ + V + KY GE R++ VF LA E AIIF+DEVD+ A AR A R RIL LL Q+DGF+Q V VI ATNR LDPAL+ R D I F LPD ++ Sbjct: 194 PRGVLLYGPPGTGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKE-NAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKR 337
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: ATD1A_DANRE (ATPase family AAA domain-containing protein 1-A OS=Danio rerio GN=atad1a PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 2.179e-22 Identity = 70/214 (32.71%), Postives = 108/214 (50.47%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFE--QDKKVVVIAATNRKQDLDPALISRFDSMITFGLPDHENRQEIAAQYAKH---XXXXXXXXXXXXXXXMSGRDIRDVCQQAERSWASKIIRGQITKD-GEQACLPPLQEYIES 698 P+ VL GPPG GKT A+ A +G + + + K+YGES++L VFSLA ++ IIFLDE+DSF R S HEAT + + + DG + ++ +V+V+ ATNR QD+D A++ R + GLP+ R+EI SG D++++C+ A +R Q K +Q L +E+++S Sbjct: 129 PKGVLLYGPPGCGKTLIAKATAKASGCRFINLQASTLTDKWYGESQKLTAAVFSLAVKI-QPCIIFLDEIDSFLRNRSSMDHEATAMMKAQFMSLWDGLDTGENSQVMVMGATNRPQDVDAAILRRMPTAFHVGLPNAAQREEILRLILSGENLSNAINLKEIASQSEGYSGSDLKELCRDAAMYRVRDYVRKQQMKQIAQQFQLDEEEEHVDS 341
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: ATAD1_RAT (ATPase family AAA domain-containing protein 1 OS=Rattus norvegicus GN=Atad1 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.179e-22 Identity = 72/233 (30.90%), Postives = 117/233 (50.21%), Query Frame = 3 Query: 21 EVYDDIALETRCK--FESNR----PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDK--KVVVIAATNRKQDLDPALISRFDSMITFGLPDHENRQEIAAQYAKH---XXXXXXXXXXXXXXXMSGRDIRDVCQQAERSWASKIIRGQITKDGEQACLPPLQE 686 ++ D + L + K FE++R P+ VL GPPG GKT A+ A +AG + + + K+YGES++L VFSLA +L +IIF+DE+DSF R S HEAT + + + DG + D +V+V+ ATNR QDLD A++ R + P + R+ I K+ SG D++++C+ A + + + ++ + P+Q+ Sbjct: 102 DLKDTVILPIKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKL-QPSIIFIDEIDSFLRNRSSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMRRMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVREYVNSTSEESHDEDEIRPVQQ 333
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: ATAD1_MOUSE (ATPase family AAA domain-containing protein 1 OS=Mus musculus GN=Atad1 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.179e-22 Identity = 72/233 (30.90%), Postives = 117/233 (50.21%), Query Frame = 3 Query: 21 EVYDDIALETRCK--FESNR----PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDK--KVVVIAATNRKQDLDPALISRFDSMITFGLPDHENRQEIAAQYAKH---XXXXXXXXXXXXXXXMSGRDIRDVCQQAERSWASKIIRGQITKDGEQACLPPLQE 686 ++ D + L + K FE++R P+ VL GPPG GKT A+ A +AG + + + K+YGES++L VFSLA +L +IIF+DE+DSF R S HEAT + + + DG + D +V+V+ ATNR QDLD A++ R + P + R+ I K+ SG D++++C+ A + + + ++ + P+Q+ Sbjct: 102 DLKDTVILPIKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKL-QPSIIFIDEIDSFLRNRSSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMRRMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVREYVNSTSEESHDEDEIRPVQQ 333
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: ATAD1_HUMAN (ATPase family AAA domain-containing protein 1 OS=Homo sapiens GN=ATAD1 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.179e-22 Identity = 72/233 (30.90%), Postives = 117/233 (50.21%), Query Frame = 3 Query: 21 EVYDDIALETRCK--FESNR----PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDK--KVVVIAATNRKQDLDPALISRFDSMITFGLPDHENRQEIAAQYAKH---XXXXXXXXXXXXXXXMSGRDIRDVCQQAERSWASKIIRGQITKDGEQACLPPLQE 686 ++ D + L + K FE++R P+ VL GPPG GKT A+ A +AG + + + K+YGES++L VFSLA +L +IIF+DE+DSF R S HEAT + + + DG + D +V+V+ ATNR QDLD A++ R + P + R+ I K+ SG D++++C+ A + + + ++ + P+Q+ Sbjct: 102 DLKDTVILPIKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKL-QPSIIFIDEIDSFLRNRSSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMRRMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVREYVNSTSEESHDEDEIRPVQQ 333
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PRS6B_MANSE (26S protease regulatory subunit 6B OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.845e-22 Identity = 76/203 (37.44%), Postives = 97/203 (47.78%), Query Frame = 3 Query: 21 EVYDDIALETRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATR---RILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAKH---XXXXXXXXXXXXXXXMSGRDIRDVCQQA 605 E+Y I +E PR VL GPPG GKT A +A+ + V + KY GE R++ VF LA E + AIIF+DE+D+ A R A R RIL LL Q+DGF+Q V VI ATNR LDPAL+ R D I F LPD ++ I + +SG DI +CQ+A Sbjct: 186 ELYRQIGIEP--------PRGVLMYGPPGCGKTMLANAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKE-NSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITAKMNLSEEVDLEEFVARPDRVSGADINAICQEA 379
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: ATAD2_HUMAN (ATPase family AAA domain-containing protein 2 OS=Homo sapiens GN=ATAD2 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.845e-22 Identity = 69/168 (41.07%), Postives = 90/168 (53.57%), Query Frame = 3 Query: 18 PEVYDDIALETRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEV-----VMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL--ISRFDSMITFGLPDHENRQEI 500 PEV++ KF+ PR LF GPPGTGKT AR +AN+ V + +SK+ GESER L +F A ++ +IIF DE+D A R S + I+S LL +DG + ++VVI ATNR +DPAL RFD F LPD E R+EI Sbjct: 449 PEVFE--------KFKIQPPRGCLFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQM-RPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKEARKEI 607 The following BLAST results are available for this feature:
BLAST of CN188561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 381
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188561 ID=CN188561; Name=CN188561; organism=Citrus sinensis; type=EST; length=707bpback to top |