CN188428
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_COXBU (Malate dehydrogenase OS=Coxiella burnetii GN=mdh PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 2.288e-28 Identity = 67/153 (43.79%), Postives = 88/153 (57.52%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI AP IP F ++TRLD NRA+GQ++ K V V VKN+IIWGNHSS+QYPD HAT++ KP E+++D WL +FI+ +QQRGAA+IKAR D + + TP S+ + + G Y V GLI Sbjct: 132 PCNTNCLIAMNNAPDIPKDRFYAMTRLDQNRAIGQLALKAGVDVPSVKNMIIWGNHSSTQYPDFYHATID----GKPATEVIRDKNWLLNDFISVIQQRGAAVIKARGASSAASAANAALDSVWSLINTTPADDNYSVALCAQGQYGVDEGLI 280
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_DESPS (Malate dehydrogenase OS=Desulfotalea psychrophila GN=mdh PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 3.903e-28 Identity = 65/145 (44.83%), Postives = 93/145 (64.14%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGS 436 P N LIL + AP I + T++ RLDHNRAL Q+++K+ SDV+ +++WGNHS+SQ+PD+++A + AGEK + + ++ W I +QQRGAA+IKAR DH+R+WVLG+ G WVSMGVYS G+ Sbjct: 132 PANTNALILLKNAPYINPRNITAMMRLDHNRALFQVAKKMGCHCSDVEKMVVWGNHSASQFPDISYAEI---AGEKVAKGV--ENNWHGDNLIPIIQQRGAAVIKARGASSAASAASAAIDHMRNWVLGS-GGKWVSMGVYSRGN 270
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_COXBR (Malate dehydrogenase OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=mdh PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 3.903e-28 Identity = 67/153 (43.79%), Postives = 87/153 (56.86%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI AP IP F ++TRLD NRA+GQ++ K V V VKN+IIWGNHSS+QYPD HAT++ KP E+++D WL +FI +QQRGAA+IKAR D + + TP S+ + + G Y V GLI Sbjct: 132 PCNTNCLIAMNNAPDIPKDRFYAMTRLDQNRAIGQLALKAGVDVPSVKNMIIWGNHSSTQYPDFYHATID----GKPATEVIRDKNWLLNDFIPVIQQRGAAVIKARGASSAASAANAALDSVWSLINTTPADDNYSVALCAQGQYGVDEGLI 280
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_COXBN (Malate dehydrogenase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=mdh PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 3.903e-28 Identity = 67/153 (43.79%), Postives = 87/153 (56.86%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI AP IP F ++TRLD NRA+GQ++ K V V VKN+IIWGNHSS+QYPD HAT++ KP E+++D WL +FI +QQRGAA+IKAR D + + TP S+ + + G Y V GLI Sbjct: 132 PCNTNCLIAMNNAPDIPKDRFYAMTRLDQNRAIGQLALKAGVDVPSVKNMIIWGNHSSTQYPDFYHATID----GKPATEVIRDKNWLLNDFIPVIQQRGAAVIKARGASSAASAANAALDSVWSLINTTPADDNYSVALCAQGQYGVDEGLI 280
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_COXB1 (Malate dehydrogenase OS=Coxiella burnetii (strain CbuK_Q154) GN=mdh PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 3.903e-28 Identity = 67/153 (43.79%), Postives = 87/153 (56.86%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI AP IP F ++TRLD NRA+GQ++ K V V VKN+IIWGNHSS+QYPD HAT++ KP E+++D WL +FI +QQRGAA+IKAR D + + TP S+ + + G Y V GLI Sbjct: 132 PCNTNCLIAMNNAPDIPKDRFYAMTRLDQNRAIGQLALKAGVDVPSVKNMIIWGNHSSTQYPDFYHATID----GKPATEVIRDKNWLLNDFIPVIQQRGAAVIKARGASSAASAANAALDSVWSLINTTPADDNYSVALCAQGQYGVDEGLI 280
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_COXB2 (Malate dehydrogenase OS=Coxiella burnetii (strain CbuG_Q212) GN=mdh PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 5.097e-28 Identity = 67/153 (43.79%), Postives = 87/153 (56.86%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI AP IP F ++TRLD NRA+GQ++ K V V VKN+IIWGNHSS+QYPD HAT++ KP E+++D WL +FI +QQRGAA+IKAR D + + TP S+ + + G Y V GLI Sbjct: 132 PCNTNCLIAMNNAPDIPKDRFYAMTRLDQNRAIGQLALKAGVDVPSVKNMIIWGNHSSTQYPDFYHATID----GKPATEVIRDKNWLLNDFIPVIQQRGAAVIKARGASSAASAANAALDSVWSLINTTPADDNYSVALCAQGRYGVDEGLI 280
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_RALSO (Malate dehydrogenase OS=Ralstonia solanacearum GN=mdh PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.483e-27 Identity = 61/149 (40.94%), Postives = 89/149 (59.73%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVP 448 P N I + AP +P + FT++ RLDHNRAL QI+ K VS ++ + +WGNHS + Y D +AT++ + V++++ D W N F+ TV +RGAAII+AR DH+RDWVLG+ G V+MG+ S+G Y +P Sbjct: 135 PANTNAYIAMKSAPDLPRENFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNHSPTMYADYRYATID----GQSVKDMINDPVWNNDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGS-NGKIVTMGIPSNGDYEIP 278
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_DECAR (Malate dehydrogenase OS=Dechloromonas aromatica (strain RCB) GN=mdh PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.937e-27 Identity = 62/133 (46.62%), Postives = 82/133 (61.65%), Query Frame = 2 Query: 62 FTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 + + RLDHNRAL Q++ K VS +K +++WGNHS + Y D T N + V+ LV D AW N F+ TV +RGAAII+AR DH+RDWVLG+ E WV+MGV SDGSY +PAG++ Sbjct: 156 YHGMLRLDHNRALSQLAGKTGRAVSSLKKLVVWGNHSPTMYADYRFCTSNGDS----VKALVNDHAWNNDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGSDE--WVTMGVPSDGSYGIPAGIV 282
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_RALME (Malate dehydrogenase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=mdh PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 9.612e-27 Identity = 61/149 (40.94%), Postives = 88/149 (59.06%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVP 448 P N I + AP++ + FT++ RLDHNRAL QI+ K VS ++ + +WGNHS + Y D +ATV+ K V++++ D W N F+ TV +RGAAII+AR DH+ DWVLG+ G V+MG+ S+G Y +P Sbjct: 133 PANTNAYIAMKSAPNLKRENFTAMLRLDHNRALSQIAAKTGKPVSSIEKMFVWGNHSPTMYADYRYATVD----GKSVKDMINDPVWNNDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHVHDWVLGS-NGKVVTMGIPSNGEYGIP 276
BLAST of CN188428 vs. ExPASy Swiss-Prot
Match: MDH_COREF (Malate dehydrogenase OS=Corynebacterium efficiens GN=mdh PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 9.612e-27 Identity = 64/153 (41.83%), Postives = 89/153 (58.17%), Query Frame = 2 Query: 2 PXIXNXLILKEFAPSIPAKIFTSLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLI 460 P N LI AP +P F ++ RLDHNRA+ Q++ K S+ ++V++WGNHS++Q+PD+ +ATV GEK V +LV D W EFI V +RGA II+ R DH+RDW+ GT TW S + S G+Y +P G+I Sbjct: 132 PANTNALIAMSNAPDVPQSRFNAMMRLDHNRAISQLATKTGRLSSEFQDVVVWGNHSAAQFPDITYATV---GGEK-VSDLVDHD-WYVNEFIPRVAKRGAEIIEVRGKSSAASAASSAVDHMRDWIQGTE--TWASAAIPSTGAYGIPEGII 277 The following BLAST results are available for this feature:
BLAST of CN188428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 187
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188428 ID=CN188428; Name=CN188428; organism=Citrus sinensis; type=EST; length=461bpback to top |