CK938587
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK938587 vs. ExPASy Swiss-Prot
Match: DCEA_LISMO (Glutamate decarboxylase alpha OS=Listeria monocytogenes GN=gadA PE=3 SV=2) HSP 1 Score: 216.853 bits (551), Expect = 1.255e-55 Identity = 113/262 (43.13%), Postives = 159/262 (60.69%), Query Frame = 1 Query: 100 IPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYD--KPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVG 879 +P +M S+ AYQ++ D+L+ +G+ R NLA+F T+MEPE ++++ ++ KN +D EYP T +L++ CVNM+A L+N V + + +G TVGSSEA ML G+A K +W+ + G KP++V + QVCWEKF Y+ + +N ++ VDE TI + ILG T TG+F+D+ L+DL+ N + IHVD ASG PF+ P LEWDFRLP V SIN SGHKYGLVY GVG Sbjct: 23 LPEKRMNKESVDPRIAYQLVKDQLIDEGSARQNLATFCQTYMEPEAEQIMAETMEKNAIDKSEYPQTAKLESSCVNMLADLWN--VDESEHYMGTSTVGSSEACMLGGMAMKFRWRSAALKNGLDIHAKKPSLVISSGYQVCWEKFCVYWDIELREVPMSEEHLSINTDIIMDYVDEYTIGIVGILGITYTGKFDDIMTLNDLVEDYNNTHDNEVVIHVDGASGAMFTPFVEPGLEWDFRLPNVVSINTSGHKYGLVYPGVG 282
BLAST of CK938587 vs. ExPASy Swiss-Prot
Match: DCE_YEAST (Glutamate decarboxylase OS=Saccharomyces cerevisiae GN=GAD1 PE=1 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 9.948e-53 Identity = 113/271 (41.70%), Postives = 157/271 (57.93%), Query Frame = 1 Query: 106 RFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYF-XXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLT----KKNEETGWDTPIHVDAASGGFIAPF--------LYPDLEWDFRLPLVKSINVSGHKYGLVYAGVG 879 ++ +P +P + +YQ+I++EL LDGNP LNLASFV T+ + KL+ ++ KN D DEYP EL RC++M+A L++ D+ +G T GSSEAIML GLA K++W+ + K GK KPNI+ + QV EKF RYF +++++P + VDENTI ILG+T TG E+V+ + D+L+ K + + D PIH D ASGGFI PF Y W F P V S+N SGHK+GL G+G Sbjct: 59 KYSVPKKGLPADLSYQLIHNELTLDGNPHLNLASFVNTFTTDQARKLIDENLTKNLADNDEYPQLIELTQRCISMLAQLWH--ANPDEEPIGCATTGSSEAIMLGGLAMKKRWEHRMKNAGKDASKPNIIMSSACQVALEKFTRYFEVECRLVPVSHRSHHMLDPESLWDYVDENTIGCFVILGTTYTGHLENVEKVADVLSQIEAKHPDWSNTDIPIHADGASGGFIIPFGFEKEHMKAYGMERWGFNHPRVVSMNTSGHKFGLTTPGLG 327
BLAST of CK938587 vs. ExPASy Swiss-Prot
Match: MFNA_UNCMA (L-tyrosine decarboxylase OS=Uncultured methanogenic archaeon RC-I GN=mfnA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.075e-14 Identity = 60/225 (26.67%), Postives = 99/225 (44.00%), Query Frame = 1 Query: 187 PRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL 861 P + S + T P K +N N D +P T ++++RC+ +I L + P A + G G+ I A + K +R+ NIV + +EK A +P + L+D+NTI + A+ G+T G+ + ++ + L + D +HVDAA GGF+ PF+ ++DF +P V+SI + HK GL Sbjct: 24 PYGRVLSSMCTNPHPIAVKAHQEFVNTNLGDPKLFPGTADIEHRCIGLIGDLLHLPAATGYISTG----GTESNIQALRTAIQMKHTDRRRA--------NIVVPESAHYSFEK-ASQMLGIAIRRAPLDDLLRADPSEMAALIDKNTIALVAVAGTTEFGQIDPIEEIGRLAQEH------DLYLHVDAAFGGFVIPFMDRPAKFDFEIPGVQSITIDPHKMGL 229
BLAST of CK938587 vs. ExPASy Swiss-Prot
Match: MFNA_METLZ (L-tyrosine decarboxylase OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=mfnA PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 9.102e-14 Identity = 62/198 (31.31%), Postives = 94/198 (47.47%), Query Frame = 1 Query: 268 NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL 861 N D +P TT++++R V+ + L + P A G GT + +AI +A +K K + K PNIV A+ ++K Y V + K E+VD+NTI V+AI G+T G +DV+ + + + D HVDAA GG + PFL +DF +P V SI++ HK G+ Sbjct: 51 NLGDPGLFPGTTKIEDRLVHSLGELMHHPGAGGYATSG-GTESNLQAIRIA---------KKLKPEIK---NPNIVVPASAHFSFDKTCDILGLEMRTVPYGKNYTV-DCDKMAEMVDKNTISVSAIAGTTEYGMIDDVERIAKIALEN------DLFFHVDAAFGGMVIPFLPNPAPFDFEVPGVSSISLDPHKMGM 228
BLAST of CK938587 vs. ExPASy Swiss-Prot
Match: MFNA_METTP (L-tyrosine decarboxylase OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=mfnA PE=3 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 1.006e-12 Identity = 65/252 (25.79%), Postives = 104/252 (41.27%), Query Frame = 1 Query: 109 FKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVE-LVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL 861 + P+ + ++ ++ + D P L S + T P + + N D +P T E++ R V ++ L A + G GT + +A+ A R G+ NIV + ++K A V V VE L+D+ T+C+ I G+T G+ + + L +L + P+HVDAA GGF+ PFL D WDFR V+SI + HK G+ Sbjct: 2 YTFPEKGLSEDMVTDLLKEMRSRDC-PYDRLLSTMCTRPHPVAVRAYSMFLETNLGDPGLFPGTAEIERRVVGILGSLLGCSDATGYVSTG-GTESNIQAVRAA-----------RNSSGRR--DGNIVVPRSAHFSFDKIADLLNLEVRKAELDESLRV--DVGDVERLIDDRTVCLVGIAGTTEFGQVDPIGDLSELAIENG------IPLHVDAAFGGFVLPFLEKDCMWDFRAEGVQSITIDPHKMGM 230
BLAST of CK938587 vs. ExPASy Swiss-Prot
Match: MFNA_METHJ (L-tyrosine decarboxylase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=mfnA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.519e-12 Identity = 57/198 (28.79%), Postives = 86/198 (43.43%), Query Frame = 1 Query: 268 NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL 861 N D +P T L++R + A L++ P A T G GT + + + ++ K +PNI+ A+ +EK A Y M A EL+D+NT C+ + G+T G + + L L ++ +HVDAA GG++ PFL +DF +P V SI V HK GL Sbjct: 51 NLGDPGLFPGTATLEDRLIRWFADLYHEPSAGGCTTSG-GTESNIQVLRFC-------------KKTKNVKEPNIIVPASAHFSFEK-ACGMMDIEMRVVPVDEQYRMKTDAAGELIDKNTCCIVGVAGTTEYGMTDPIPALGKLAEQEGVH------LHVDAAFGGYVLPFLDDAPPFDFSVPGVGSIAVDPHKMGL 227
BLAST of CK938587 vs. ExPASy Swiss-Prot
Match: SGPL_YEAST (Sphingosine-1-phosphate lyase OS=Saccharomyces cerevisiae GN=DPL1 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.113e-11 Identity = 55/207 (26.57%), Postives = 92/207 (44.44%), Query Frame = 1 Query: 268 NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL----YPDLEW-DFRLPLVKSINVSGHKYGLVYAG 873 N + D +P ++++ V+M+ +FN P T G T G +E+++LA L+ K R +P I+ ++K A YF Y ++ K + +++NTI + + G +D++ L + K + P+HVD+ G FI F+ Y +L DFR+P V SI+ HKYG G Sbjct: 195 NQLHPDVFPAVRKMESEVVSMVLRMFNAP---SDTGCGTTTSGGTESLLLACLSAKMYALHHRG-----ITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDPTTYQVDLGKVKKFINKNTILLVGSAPNFPHGIADDIEGLGKIAQK------YKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKG 387
BLAST of CK938587 vs. ExPASy Swiss-Prot
Match: MFNA_THEGJ (L-tyrosine decarboxylase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=mfnA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.479e-11 Identity = 60/220 (27.27%), Postives = 94/220 (42.73%), Query Frame = 1 Query: 217 TWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL----YPDLEWDFRLPLVKSINVSGHKYGLV 864 T+ P K++ I++N D + + +++ V M+++L K G G +EA +LA AF+ +KP ++ + + K Y V N E + +NTI + I G+T G +D+ L DL + P+HVDAA GGF+ PF Y ++DFRL VKSI + HK G+V Sbjct: 37 TYPHPFAVKIITEFIDRNLGDPGLHIGSRKVEEEAVEMLSNLLGL-----KKGYGHIVSGGTEANILAVRAFRNL---------AGVEKPELILPKSAHFSFIKAGEMLGVKLIWAELNEDYTV-NVRDVEEKITDNTIGIVGIAGTTGLGVVDDIPALSDLALD------YGLPLHVDAAFGGFVIPFAKALGYDIPDFDFRLKGVKSITIDPHKMGMV 235
BLAST of CK938587 vs. ExPASy Swiss-Prot
Match: MFNA_METKA (L-tyrosine decarboxylase OS=Methanopyrus kandleri GN=mfnA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.479e-11 Identity = 65/217 (29.95%), Postives = 96/217 (44.24%), Query Frame = 1 Query: 229 PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAH-LFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVE-LVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL---YPDLEWDFRLPLVKSINVSGHKYGLV 864 P + +A ++ N D +P + C+ +A L + P ++ A G G +EA +LA A + + I+ A +EK AR Y V V AV+ L+ +T + I+G+T TG +D++ L D+ E+ G P+HVDAA GGF APFL YP + F L V S+ V HK GLV Sbjct: 24 PVAAEAFVAGLHVNLGDPYLFPNAYRAERECIGWLAETLLDHPAPEE--AEGSIVSGGTEANILAAYAAREVTGGRE-----------IIVPATRHFSFEKAARMLRMKLVEAPLRSDYTV--DVDAVQDLISRDTALIVGIVGTTETGSVDDIEALSDVA----EDHG--VPLHVDAAFGGFTAPFLREEYPLPRFGFDLEAVVSVTVDPHKMGLV 219
BLAST of CK938587 vs. ExPASy Swiss-Prot
Match: MFNA_METAC (L-tyrosine decarboxylase OS=Methanosarcina acetivorans GN=mfnA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.479e-11 Identity = 57/208 (27.40%), Postives = 89/208 (42.79%), Query Frame = 1 Query: 259 INKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVAD-------DKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL 861 I N D+ + + L+ V M+ L + P D + +A G T G +E+ + A K +KE PNIV + ++K A + V + L+D NTI + I G+T G+ + + L ++ + + +H+DAA GGF+ PFL +DF+LP V SI V HK GL Sbjct: 48 IEANLGDLGLFAGASRLEQEVVGMLGELLHAPSIDVPFGGSCESSACGYLTTGGTESNIQAVRGMKNLVTTGKKELK---GAPNIVIPESAHFSFDKVADMMGIEVRRASLDSEFRV-DMASIESLIDANTIGLIGIAGNTEFGQIDPIDKLSEIALEN------ELFLHIDAAFGGFVIPFLEKPQPFDFKLPGVTSIAVDPHKMGL 245 The following BLAST results are available for this feature:
BLAST of CK938587 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938587 ID=CK938587; Name=CK938587; organism=Citrus sinensis; type=EST; length=879bpback to top |