CK937441

Overview
NameCK937441
Unique NameCK937441
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length675
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10885 contig Csv1_Contig10885:11..684. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK937441 vs. ExPASy Swiss-Prot
Match: SFGH2_ECOLI (S-formylglutathione hydrolase yeiG OS=Escherichia coli (strain K12) GN=yeiG PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.247e-50
Identity = 103/193 (53.37%), Postives = 128/193 (66.32%), Query Frame = 2 
Query:   95 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWK-NWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTNYLGSNK 670
            +   + F G+ +R++H S+TL C M F I+           PVLYWLSGLTC DENF  K+GAQR A+  G+ L+ PDTSPRG  V  + D +D G GAGFYLNATQ  W  ++RMYDY+  ELP L+   F    + R +I GHSMGGHGAL + LKN  KY SVSAFAPI NP + PWG KAF++YLG +K
Sbjct:    4 LEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPP-PVLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPDTSPRGEKVAND-DGYDLGQGAGFYLNATQPPWATHYRMYDYLRDELPALVQSQFNV--SDRCAISGHSMGGHGALIMALKNPGKYTSVSAFAPIVNPCSVPWGIKAFSSYLGEDK 192
[Close]
BLAST of CK937441 vs. ExPASy Swiss-Prot
Match: SFGH2_ECOLC (S-formylglutathione hydrolase yeiG OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=yeiG PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.247e-50
Identity = 103/193 (53.37%), Postives = 128/193 (66.32%), Query Frame = 2 
Query:   95 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWK-NWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTNYLGSNK 670
            +   + F G+ +R++H S+TL C M F I+           PVLYWLSGLTC DENF  K+GAQR A+  G+ L+ PDTSPRG  V  + D +D G GAGFYLNATQ  W  ++RMYDY+  ELP L+   F    + R +I GHSMGGHGAL + LKN  KY SVSAFAPI NP + PWG KAF++YLG +K
Sbjct:    4 LEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPP-PVLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPDTSPRGEKVAND-DGYDLGQGAGFYLNATQPPWATHYRMYDYLRDELPALVQSQFNV--SDRCAISGHSMGGHGALIMALKNPGKYTSVSAFAPIVNPCSVPWGIKAFSSYLGEDK 192
[Close]
BLAST of CK937441 vs. ExPASy Swiss-Prot
Match: SFGH2_ECOK1 (S-formylglutathione hydrolase yeiG OS=Escherichia coli O1:K1 / APEC GN=yeiG PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.247e-50
Identity = 103/193 (53.37%), Postives = 127/193 (65.80%), Query Frame = 2 
Query:   95 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWK-NWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTNYLGSNK 670
            +   + F G+ +R++H S+TL C M F I+           PVLYWLSGLTC DENF  K+GAQR A+  G+ L+ PDTSPRG  V  + D +D G GAGFYLNATQ  W  ++RMYDY+  ELP L+   F    + R +I GHSMGGHGAL + LKN  KY SVSAFAPI NP + PWG KAF+ YLG +K
Sbjct:    4 LEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPP-PVLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPDTSPRGEQVAND-DGYDLGQGAGFYLNATQPPWATHYRMYDYLRDELPALIQSQFNV--SDRCAISGHSMGGHGALIMALKNPGKYTSVSAFAPIVNPCSVPWGIKAFSTYLGEDK 192
[Close]
BLAST of CK937441 vs. ExPASy Swiss-Prot
Match: SFGH2_ECOHS (S-formylglutathione hydrolase yeiG OS=Escherichia coli O9:H4 (strain HS) GN=yeiG PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.247e-50
Identity = 103/193 (53.37%), Postives = 128/193 (66.32%), Query Frame = 2 
Query:   95 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWK-NWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTNYLGSNK 670
            +   + F G+ +R++H S+TL C M F I+           PVLYWLSGLTC DENF  K+GAQR A+  G+ L+ PDTSPRG  V  + D +D G GAGFYLNATQ  W  ++RMYDY+  ELP L+   F    + R +I GHSMGGHGAL + LKN  KY SVSAFAPI NP + PWG KAF++YLG +K
Sbjct:    4 LEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPP-PVLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPDTSPRGEKVAND-DGYDLGQGAGFYLNATQPPWATHYRMYDYLRDELPALVQSQFNV--SDRCAISGHSMGGHGALIMALKNPGKYTSVSAFAPIVNPCSVPWGIKAFSSYLGEDK 192
[Close]
BLAST of CK937441 vs. ExPASy Swiss-Prot
Match: SFGH2_ECODH (S-formylglutathione hydrolase yeiG OS=Escherichia coli (strain K12 / DH10B) GN=yeiG PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.247e-50
Identity = 103/193 (53.37%), Postives = 128/193 (66.32%), Query Frame = 2 
Query:   95 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWK-NWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTNYLGSNK 670
            +   + F G+ +R++H S+TL C M F I+           PVLYWLSGLTC DENF  K+GAQR A+  G+ L+ PDTSPRG  V  + D +D G GAGFYLNATQ  W  ++RMYDY+  ELP L+   F    + R +I GHSMGGHGAL + LKN  KY SVSAFAPI NP + PWG KAF++YLG +K
Sbjct:    4 LEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPP-PVLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPDTSPRGEKVAND-DGYDLGQGAGFYLNATQPPWATHYRMYDYLRDELPALVQSQFNV--SDRCAISGHSMGGHGALIMALKNPGKYTSVSAFAPIVNPCSVPWGIKAFSSYLGEDK 192
[Close]
BLAST of CK937441 vs. ExPASy Swiss-Prot
Match: SFGH2_SHISS (S-formylglutathione hydrolase yeiG OS=Shigella sonnei (strain Ss046) GN=yeiG PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.935e-50
Identity = 103/193 (53.37%), Postives = 127/193 (65.80%), Query Frame = 2 
Query:   95 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWK-NWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTNYLGSNK 670
            +   + F G+ +R++H S+TL C M F I+           PVLYWLSGLTC DENF  K+GAQR A+  G+ L+ PDTSPRG  V  + D +D G GAGFYLNATQ  W  ++RMYDY+  ELP L+   F    + R +I GHSMGGHGAL + LKN  KY SVSAFAPI NP + PWG KAF+ YLG +K
Sbjct:    4 LEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPP-PVLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPDTSPRGEKVAND-DGYDLGQGAGFYLNATQPPWATHYRMYDYLRDELPALVQSQFNV--SDRCAISGHSMGGHGALIMALKNPGKYTSVSAFAPIVNPCSVPWGIKAFSTYLGEDK 192
[Close]
BLAST of CK937441 vs. ExPASy Swiss-Prot
Match: SFGH2_SHIF8 (S-formylglutathione hydrolase yeiG OS=Shigella flexneri serotype 5b (strain 8401) GN=yeiG PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.935e-50
Identity = 103/193 (53.37%), Postives = 127/193 (65.80%), Query Frame = 2 
Query:   95 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWK-NWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTNYLGSNK 670
            +   + F G+ +R++H S+TL C M F I+           PVLYWLSGLTC DENF  K+GAQR A+  G+ L+ PDTSPRG  V  + D +D G GAGFYLNATQ  W  ++RMYDY+  ELP L+   F    + R +I GHSMGGHGAL + LKN  KY SVSAFAPI NP + PWG KAF+ YLG +K
Sbjct:    4 LEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPP-PVLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPDTSPRGEKVAND-DGYDLGQGAGFYLNATQPPWATHYRMYDYLRDELPALVQSQFNV--SDRCAISGHSMGGHGALIMALKNPGKYTSVSAFAPIVNPCSVPWGIKAFSTYLGEDK 192
[Close]
BLAST of CK937441 vs. ExPASy Swiss-Prot
Match: SFGH2_ECOL6 (S-formylglutathione hydrolase yeiG OS=Escherichia coli O6 GN=yeiG PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.935e-50
Identity = 103/193 (53.37%), Postives = 127/193 (65.80%), Query Frame = 2 
Query:   95 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWK-NWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTNYLGSNK 670
            +   + F G+ +R++H S+TL C M F I+           PVLYWLSGLTC DENF  K+GAQR A+  G+ L+ PDTSPRG  V  + D +D G GAGFYLNATQ  W  ++RMYDY+  ELP L+   F    + R +I GHSMGGHGAL + LKN  KY SVSAFAPI NP + PWG KAF+ YLG +K
Sbjct:    4 LEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPP-PVLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPDTSPRGEQVAND-DGYDLGQGAGFYLNATQPPWATHYRMYDYLRDELPALVQSQFNV--SDRCAISGHSMGGHGALIMALKNPGKYTSVSAFAPIVNPCSVPWGIKAFSTYLGEDK 192
[Close]
BLAST of CK937441 vs. ExPASy Swiss-Prot
Match: SFGH2_ECOL5 (S-formylglutathione hydrolase yeiG OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=yeiG PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.935e-50
Identity = 103/193 (53.37%), Postives = 127/193 (65.80%), Query Frame = 2 
Query:   95 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWK-NWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTNYLGSNK 670
            +   + F G+ +R++H S+TL C M F I+           PVLYWLSGLTC DENF  K+GAQR A+  G+ L+ PDTSPRG  V  + D +D G GAGFYLNATQ  W  ++RMYDY+  ELP L+   F    + R +I GHSMGGHGAL + LKN  KY SVSAFAPI NP + PWG KAF+ YLG +K
Sbjct:    4 LEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPP-PVLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPDTSPRGEQVAND-DGYDLGQGAGFYLNATQPPWATHYRMYDYLRDELPALVQSQFNV--SDRCAISGHSMGGHGALIMALKNPGKYTSVSAFAPIVNPCSVPWGIKAFSTYLGEDK 192
[Close]
BLAST of CK937441 vs. ExPASy Swiss-Prot
Match: SFGH2_ECO57 (S-formylglutathione hydrolase yeiG OS=Escherichia coli O157:H7 GN=yeiG PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.935e-50
Identity = 103/193 (53.37%), Postives = 127/193 (65.80%), Query Frame = 2 
Query:   95 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWK-NWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTNYLGSNK 670
            +   + F G+ +R++H S+TL C M F I+           PVLYWLSGLTC DENF  K+GAQR A+  G+ L+ PDTSPRG  V  + D +D G GAGFYLNATQ  W  ++RMYDY+  ELP L+   F    + R +I GHSMGGHGAL + LKN  KY SVSAFAPI NP + PWG KAF+ YLG +K
Sbjct:    4 LEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPP-PVLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPDTSPRGEKVAND-DGYDLGQGAGFYLNATQPPWATHYRMYDYLRDELPALVQSQFNV--SDRCAISGHSMGGHGALIMALKNPGKYTSVSAFAPIVNPCSVPWGIKAFSRYLGEDK 192
The following BLAST results are available for this feature:
BLAST of CK937441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
SFGH2_ECOLI2.247e-5053.37S-formylglutathione hydrolase yeiG OS=Escherichia ... [more]
SFGH2_ECOLC2.247e-5053.37S-formylglutathione hydrolase yeiG OS=Escherichia ... [more]
SFGH2_ECOK12.247e-5053.37S-formylglutathione hydrolase yeiG OS=Escherichia ... [more]
SFGH2_ECOHS2.247e-5053.37S-formylglutathione hydrolase yeiG OS=Escherichia ... [more]
SFGH2_ECODH2.247e-5053.37S-formylglutathione hydrolase yeiG OS=Escherichia ... [more]
SFGH2_SHISS2.935e-5053.37S-formylglutathione hydrolase yeiG OS=Shigella son... [more]
SFGH2_SHIF82.935e-5053.37S-formylglutathione hydrolase yeiG OS=Shigella fle... [more]
SFGH2_ECOL62.935e-5053.37S-formylglutathione hydrolase yeiG OS=Escherichia ... [more]
SFGH2_ECOL52.935e-5053.37S-formylglutathione hydrolase yeiG OS=Escherichia ... [more]
SFGH2_ECO572.935e-5053.37S-formylglutathione hydrolase yeiG OS=Escherichia ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004780_G04 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0003_IVF_G04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937441 ID=CK937441; Name=CK937441; organism=Citrus sinensis; type=EST; length=675bp
CGCGCCGGGNNNTGAAAGAACAAAGATCGTACACACACAGGGGCGAGCNN
NACACAATCAATCACAGAGAAAAATGGAGACGAAGCCGACAGAGATAAGC
AGTTCTAAGATGTTCGGTGGATACAACAAAAGATTCAAGCATTTCAGTAC
AACACTGGGCTGCTCCATGAATTTCCACATCTACTTCCCTCCTTCTTCTT
CTCCATCCTACAAATTCCCTGTGCTTTACTGGCTCTCTGGTCTTACCTGC
ACTGATGAAAATTTTATAGCTAAGTCAGGAGCTCAACGTGCTGCTTCCGC
TGAAGGTGTGGCTCTGATTGCCCCTGATACATCTCCAAGAGGCCTGAATG
TGGAAGGAGAGGCAGATAGCTGGGATTTTGGTGTAGGTGCTGGATTTTAT
CTTAATGCTACACAGGAGAAGTGGAAGAACTGGCGTATGTATGACTATGT
TGTCAAGGAATTGCCCAAACTTCTGAGTGAAAATTTTCCACAGCTTGAAA
CTTCTCGAGCATCCATATTTGGTCACTCAATGGGTGGGCATGGTGCTTTG
ACAATCTATCTGAAAAATCTTGACAAGTATAAGTCTGTATCTGCCTTTGC
TCCAATTTGCAATCCTGTCAACTGTCCCTGGGGTCAGAAGGCTTTTACAA
ATTATCTTGGTAGTAACAAAGCTGA
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